BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0259900 Os03g0259900|AK069483
(900 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G70750.1 | chr1:26680728-26683147 REVERSE LENGTH=750 199 8e-51
AT5G16720.1 | chr5:5494309-5496562 FORWARD LENGTH=676 169 7e-42
AT1G08800.1 | chr1:2813578-2817078 REVERSE LENGTH=1114 107 4e-23
AT1G74830.1 | chr1:28113469-28115193 REVERSE LENGTH=543 89 1e-17
AT2G30690.1 | chr2:13076229-13078595 FORWARD LENGTH=761 75 2e-13
AT1G18990.1 | chr1:6558778-6560432 REVERSE LENGTH=525 65 2e-10
AT4G13630.1 | chr4:7934093-7936029 REVERSE LENGTH=570 56 9e-08
>AT1G70750.1 | chr1:26680728-26683147 REVERSE LENGTH=750
Length = 749
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 197/375 (52%), Gaps = 52/375 (13%)
Query: 531 TVDQLKSALQAERKXXXXXXXXXXXXXXXXXXXTNQTMAMINRLQEEKAAMQMEALQYQR 590
TVD+LK LQ ERK ++TMAMINRL EEKAAMQMEALQYQR
Sbjct: 412 TVDKLKFELQEERKALHALYEELEVERNASAVAASETMAMINRLHEEKAAMQMEALQYQR 471
Query: 591 MMEEQSEYDQEALQLLNELVTXXXXXXXXXXXXXDMCRQKVLHYEDKE-----RRRMASF 645
MMEEQ+E+DQEALQLLNEL+ ++ R+++ YE KE RRR+
Sbjct: 472 MMEEQAEFDQEALQLLNELMVNREKENAELEKELEVYRKRMEEYEAKEKMGMLRRRLRDS 531
Query: 646 KANGHSPNGNXXXXXXXXXXXXXXXXEYCELGESPDGSNLQSPSHAAFSPRTDQENKKH- 704
+ + NG+ E+ +G LQ + + +EN+
Sbjct: 532 SVDSYRNNGDSD--------------------ENSNGE-LQFKNVEGVTDWKYRENEMEN 570
Query: 705 -----LVALDDSLTYFEMERLSILEELKTLEERLFTLEDDDINDTSAAVGRSSDEYELSA 759
++ LD+ L ++ ERLSIL LK LEE+L L +++ ++ A S+
Sbjct: 571 TPVDVVLRLDECLDDYDGERLSILGRLKFLEEKLTDLNNEEDDEEEAKTFESN------- 623
Query: 760 DGLHSPGNGDITSDKAKFEGRNSICRGKSLLPLFDAAGDESSDQTPSARVGDVQVDNSTK 819
NG+ + G++ + + K LLPLFDA E + + + D+S K
Sbjct: 624 ----GSINGNEHIHGKETNGKHRVIKSKRLLPLFDAVDGEMENGLSNGNHHENGFDDSEK 679
Query: 820 PVSVLVKEQERLAIIEEVDHVYERLQALEADKEFLRHCIKSLKKGDRGMDLLQEILQHLR 879
E + I EEVD +YERL+ALEAD+EFLRHC+ SLKKGD+G+ LL EILQHLR
Sbjct: 680 G--------ENVTIEEEVDELYERLEALEADREFLRHCVGSLKKGDKGVHLLHEILQHLR 731
Query: 880 ELRSVEL-HVKHAGD 893
+LR+++L V+ GD
Sbjct: 732 DLRNIDLTRVRENGD 746
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 15 LFHRRTRRVTSALAYAVLEWTLIALLLINGLFSYAIARFAAYFGLRPPCLLCSRVDRLFE 74
L HR+T R+T L YA LEW+LI +L+N LFSY I RFA YFGL+ PCL CSR+DR F+
Sbjct: 9 LIHRKTNRITLILVYAFLEWSLIFFILLNSLFSYFILRFADYFGLKRPCLFCSRLDRFFD 68
Query: 75 KATEEEDGARWLRSVLCGAHAAEI-------SGLGYCLHHGRLADAGDMCEACLSSS 124
+ + R +LC HA ++ S G+ H L G C +SSS
Sbjct: 69 ASGKSPSH----RDLLCDDHALQLHSKPVEESNCGFGEFHNDLVHRG-CCVEKISSS 120
>AT5G16720.1 | chr5:5494309-5496562 FORWARD LENGTH=676
Length = 675
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 201/404 (49%), Gaps = 55/404 (13%)
Query: 488 PETPTYSVATQISDX--XXXXXXXXXXXXXXDGSV-ASEMELSEP-STVDQLKSALQAER 543
PETPT SV+T + DG+V SEM+ +P T+++L+ ++AE+
Sbjct: 310 PETPT-SVSTLFNKKLHFLARNEYAAAEDAGDGNVLVSEMDGGDPLRTIERLRETVRAEQ 368
Query: 544 KXXXXXXXXXXXXXXXXXXXTNQTMAMINRLQEEKAAMQMEALQYQRMMEEQSEYDQEAL 603
+ NQTMAMI RLQEEKA +QMEALQYQRMMEEQ+EYDQEAL
Sbjct: 369 EALRDLYAELEEERSASAISANQTMAMITRLQEEKAKVQMEALQYQRMMEEQAEYDQEAL 428
Query: 604 QLLNELVTXXXXXXXXXXXXXDMCRQKVLHYEDKERRRMASFKANGHSPNGNXXXXXXXX 663
QLLN L+ ++ R KVL YE K + ++ + + + + +
Sbjct: 429 QLLNHLMVKREKEKEQLQRELEVYRAKVLEYESKAKNKIIVVENDCEADDDDKEEENREE 488
Query: 664 XXXXXXXXEYCELGESPDGSNLQSPSHAAFSPRTDQE-NKKHLVALDDSLTYFEMERLSI 722
E+ + L H + + E ++ LV LD +L +
Sbjct: 489 DNS-------SEMDVDLEKITLDCVQHMSMLGESLSEFEEERLVILD---------QLKV 532
Query: 723 LEELKTLEERLFTLEDDDINDTSAAVGRSSDEYELSADGLHSPGNGDITSDKAKFEGRNS 782
L E+RL T++D +++ G S+ YE + S G+G +T
Sbjct: 533 L------EDRLVTMQD---KESAEDPGEFSNSYEEA-----SNGHGGLT----------M 568
Query: 783 ICRGKSLLPLFDAAGDESSDQTPSARVGDVQVDNSTKPVSVLVKEQERLAIIEEVDHVYE 842
KSLLPL DAA +ES D + D + S + E+L II++VD VYE
Sbjct: 569 ASMAKSLLPLLDAAENESEDGSQGLPESDEKNFGS---------DSEKLEIIKQVDSVYE 619
Query: 843 RLQALEADKEFLRHCIKSLKKGDRGMDLLQEILQHLRELRSVEL 886
RLQ LE D EFL++C+ S KKGD+G D+L++ILQHLR+LR++EL
Sbjct: 620 RLQELETDGEFLKNCMSSAKKGDKGTDILKDILQHLRDLRTIEL 663
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 78/127 (61%), Gaps = 10/127 (7%)
Query: 18 RRTRRVTSALAYAVLEWTLIALLLINGLFSYAIARFAAYFGLRPPCLLCSRVDRLFEKAT 77
R T R+T L YA LEW L+ + +N F+Y I +FA++FGL+ CLLC ++DR+FE+
Sbjct: 12 RNTNRITVILVYAFLEWLLMFFIFLNSFFTYFIVKFASFFGLKQVCLLCPKLDRIFERKP 71
Query: 78 EEEDGARW-LRSVLCGAHAAEISGLGYCLHHGRLADAGDMCEACLSSSKEESIKDAGEES 136
E R+ + +LC H AE++ L +C HG+L+++ ++C C S++EE + G
Sbjct: 72 EN----RFTYKELLCQNHIAELASLSFCRTHGKLSESANLCSDC--SNREEEQSNIG--- 122
Query: 137 ATVCSCC 143
C+CC
Sbjct: 123 LGFCTCC 129
>AT1G08800.1 | chr1:2813578-2817078 REVERSE LENGTH=1114
Length = 1113
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 20 TRRVTSALAYAVLEWTLIALLLINGLFSYAIARFAAYFGLRPPCLLCSRVDRLFEKATEE 79
+R T ALA A EW L+ +L +N +FSY IARFA Y L+ PCL+CS +D + + T++
Sbjct: 3 SRSFTRALALAFNEWLLMFMLFVNSIFSYVIARFADYSELQSPCLMCSNLDHILRR-TKD 61
Query: 80 EDGARWLRSVLCGAHAAEISGLGYCLHHGRLADAGDMCEACLSS 123
W ++C H +EIS L YC HG+L D MCE CL S
Sbjct: 62 LKKTHW--DIICSKHKSEISSLVYCHAHGKLVDVRGMCETCLFS 103
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 48/78 (61%)
Query: 533 DQLKSALQAERKXXXXXXXXXXXXXXXXXXXTNQTMAMINRLQEEKAAMQMEALQYQRMM 592
D+LK + +RK TNQ MAMI RLQEEKA+ QMEALQ RMM
Sbjct: 891 DRLKRQVDYDRKLLTGLYKELEEERSASAVATNQAMAMITRLQEEKASFQMEALQNLRMM 950
Query: 593 EEQSEYDQEALQLLNELV 610
EEQ+EYD EA+Q LN+L+
Sbjct: 951 EEQAEYDMEAIQRLNDLL 968
>AT1G74830.1 | chr1:28113469-28115193 REVERSE LENGTH=543
Length = 542
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 27 LAYAVLEWTLIALLLINGLFSYAIARFAAYFGLRPPCLLCSRVDRLFEKATEEEDGARWL 86
L Y VLEW+LI L I+G+ ++ +FA +F L PCLLC+R+D + D +
Sbjct: 40 LIYTVLEWSLIVFLFIDGVIAFLSNQFAKFFDLNIPCLLCTRIDHILVP----RDPQFYY 95
Query: 87 RSVLCGAHAAEISGLGYCLHHGRLADAGDMCEACLSS 123
+C +H ++S L YC H +L++ MCE CL S
Sbjct: 96 NESICDSHKKKVSSLAYCHVHKKLSEIKHMCEGCLLS 132
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%)
Query: 530 STVDQLKSALQAERKXXXXXXXXXXXXXXXXXXXTNQTMAMINRLQEEKAAMQMEALQYQ 589
S ++QLK ++ ++K N+ MAMI RLQ EKAA+QMEALQYQ
Sbjct: 300 SILNQLKKEVRLDKKSLIDLYMELDEERSASAVAANEAMAMITRLQAEKAAVQMEALQYQ 359
Query: 590 RMMEEQSEYDQEALQLLNELVTXXXXXXXXXXXXXDMCRQKVLHYEDKERRRMASFKANG 649
RMM+EQ+EYDQEALQ ++ + ++ R+K D+E R K NG
Sbjct: 360 RMMDEQAEYDQEALQSMSSELAKREEEMKELEAEFEVYREKYGCLTDQEDAREEFHKQNG 419
Query: 650 HS 651
++
Sbjct: 420 NA 421
>AT2G30690.1 | chr2:13076229-13078595 FORWARD LENGTH=761
Length = 760
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 26 ALAYAVLEWTLIALLLINGLFSYAIARFAAYFGLRPPCLLCSRVDRLFEKATEEEDGARW 85
L YA EW LI L+ I+ L SY + FA Y L+ PC LCS++ W
Sbjct: 18 VLTYAACEWFLILLMFIDALLSYLLVWFARYCRLQMPCFLCSKLLHPL----------HW 67
Query: 86 LRSVLCGAHAAEISGLGYCLHHG-RLADAGDMCEACLSS 123
R +LC H +E+S C +HG LAD MC+ CL S
Sbjct: 68 -RFLLCRNHRSEVSSYMSCQNHGNNLADCRGMCDDCLLS 105
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 519 SVASEMELSEPSTVDQLKSALQAERKXXXXXXXXXXXXXXXXXXXTNQTMAMINRLQEEK 578
S++S++E S V+ LK L+ RK TNQ MAMI RLQEEK
Sbjct: 602 SISSDIE--GESLVEVLKQQLEHGRKSLRDLNKEFEEERNASAIATNQAMAMITRLQEEK 659
Query: 579 AAMQMEALQYQRMMEEQSEYDQEALQLLNELV 610
AA+ MEALQY RMM+EQ+E+D +AL+ N+++
Sbjct: 660 AALHMEALQYLRMMDEQAEHDMDALERANDVL 691
>AT1G18990.1 | chr1:6558778-6560432 REVERSE LENGTH=525
Length = 524
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 571 INRLQEEKAAMQMEALQYQRMMEEQSEYDQEALQLLNELVT 611
I RLQ EKAA+QMEALQYQRMM+EQ+EYDQEALQ +N L+
Sbjct: 340 ITRLQAEKAAVQMEALQYQRMMDEQAEYDQEALQSMNGLLV 380
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 27 LAYAVLEWTLIALLLINGLFSYAIARFAAYFGLRPPCLLCSRVDRLFEKATEEEDGARWL 86
L YA+LEW LI +L I+G ++ + A +F L+ PCLLC+R+D + + +
Sbjct: 21 LIYALLEWILIIILFIDGFLAFFSNQIAKFFDLKIPCLLCTRLDHVLVSRNPD----FYY 76
Query: 87 RSVLCGAHAAEISGLGYCLHHGRLADAGDMCEACLSS 123
+C AH +S L YC H +L++ MCE CL S
Sbjct: 77 NDSICDAHKKNVSSLAYCHVHKKLSEIKRMCEGCLLS 113
>AT4G13630.1 | chr4:7934093-7936029 REVERSE LENGTH=570
Length = 569
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 568 MAMINRLQEEKAAMQMEALQYQRMMEEQSEYDQEALQLLNELVTXXXXXXXXXXXXXDMC 627
+ MI RLQEEKA+++MEA QYQRM+EE+S +D E + +L E++ D
Sbjct: 258 LGMILRLQEEKASIEMEARQYQRMIEEKSAFDAEEMSILKEILLRREREKHFLEKEVDTY 317
Query: 628 RQKVLHYE 635
RQ L E
Sbjct: 318 RQMFLETE 325
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.130 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,435,483
Number of extensions: 652950
Number of successful extensions: 1937
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1922
Number of HSP's successfully gapped: 16
Length of query: 900
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 792
Effective length of database: 8,145,641
Effective search space: 6451347672
Effective search space used: 6451347672
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)