BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0257500 Os03g0257500|AK058775
(193 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G13340.1 | chr1:4569622-4571043 REVERSE LENGTH=410 89 2e-18
AT4G35730.1 | chr4:16931111-16933241 FORWARD LENGTH=467 86 9e-18
AT1G25420.1 | chr1:8916141-8917980 FORWARD LENGTH=324 80 6e-16
AT1G79910.1 | chr1:30055050-30057011 FORWARD LENGTH=382 74 4e-14
AT2G14830.1 | chr2:6362524-6365818 FORWARD LENGTH=455 74 5e-14
AT2G19710.1 | chr2:8506339-8509817 FORWARD LENGTH=938 67 7e-12
AT1G52315.1 | chr1:19481212-19482674 FORWARD LENGTH=348 64 5e-11
AT4G32350.1 | chr4:15617634-15620642 FORWARD LENGTH=733 64 6e-11
AT4G29440.1 | chr4:14473942-14477721 REVERSE LENGTH=1091 63 8e-11
AT1G34220.1 | chr1:12463102-12465911 REVERSE LENGTH=650 59 2e-09
AT3G15490.1 | chr3:5229785-5230646 FORWARD LENGTH=212 52 3e-07
>AT1G13340.1 | chr1:4569622-4571043 REVERSE LENGTH=410
Length = 409
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 4/161 (2%)
Query: 22 AVLRIATARRPHLARKSIATDDVRQLLTLDHLDRAIHRAEQVIAEDNMLEAFEMIEMYCK 81
A+ R++ + AR S A DV +LL L + A HR +QV+ + N L+ I Y
Sbjct: 25 ALTRLSILKNQRQARLSQAISDVTELLKLGQHEHAYHRVDQVVKDQNTLDVLFFIHGYFT 84
Query: 82 RLIEHAAKLDKPGECTDEIREAAASVMFAAGWCSELPELLFARTILADKFGSDFTEAA-- 139
++ + +C +E+ EA + ++FAA E PEL R +L +FG D +
Sbjct: 85 LCLDRIHLFEHNRDCPEELLEAVSGLLFAASRIGEFPELQEIRNVLISRFGKDLAARSIE 144
Query: 140 -KDGTGIVDPMLVWKLSSDAKSMELKRKVTKEIAMENNIIV 179
+ G VDP ++ KLS+ E++ K KEIA ENNI++
Sbjct: 145 LRSNCG-VDPKIIQKLSTRPPPKEVRMKALKEIAAENNIVL 184
>AT4G35730.1 | chr4:16931111-16933241 FORWARD LENGTH=467
Length = 466
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 59 RAEQVIAEDNMLEAFEMIEMYCKRLIEHAAKLDKPGECTDEIREAAASVMFAAGWCSELP 118
R E VI E N+ A E+IE++C+ ++ + K +C +++E AS++FAA CSE+P
Sbjct: 75 RVEHVIREQNIQAANEIIELFCELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSEIP 134
Query: 119 ELLFARTILADKFGSDFTEAAKD--GTGIVDPMLVWKLSSDAKSMELKRKVTKEIAMENN 176
EL R I A K+G DF AA D + V+ ML+ KLS E K K+ KEIA E
Sbjct: 135 ELGDLRDIFAKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAKEFQ 194
Query: 177 IIVDFSEL-QDAIKDEED 193
+ D +E Q+ +K +E+
Sbjct: 195 VDWDTTETEQELLKPQEE 212
>AT1G25420.1 | chr1:8916141-8917980 FORWARD LENGTH=324
Length = 323
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 59 RAEQVIAEDNMLEAFEMIEMYCKRLIEHAAKLDKPGECTDEIREAAASVMFAAGWCSELP 118
R E VI E N+ A+E++E++C+ ++ L+ EC E+REA AS++FAA CSE+P
Sbjct: 61 RVEHVIREMNLWAAYEILELFCEFILARVPILESEKECPRELREAIASIIFAAPRCSEVP 120
Query: 119 ELLFARTILADKFGSDFTEAA---KDGTGIVDPMLVWKLSSDAKSMELKRKVTKEIAMEN 175
+LL + + K+G +F A + +G V+ ++ KLS + S + K+ KEIA E
Sbjct: 121 DLLQIKNLFGTKYGKEFIMVASELRPDSG-VNRTIIEKLSPTSPSGAARLKMLKEIAQEY 179
Query: 176 NIIVDFSELQ-DAIKDEED 193
++ D S + + +K ED
Sbjct: 180 SLNWDSSATEAEFMKSHED 198
>AT1G79910.1 | chr1:30055050-30057011 FORWARD LENGTH=382
Length = 381
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 25 RIATARRPHLARKSIATDDVRQLL--TLDHLDRAIHRAEQVIAEDNMLEAFEMIEMYCKR 82
R+ T +R + +D+ LL +LD+ A RAE +I E L +E +E +C
Sbjct: 24 RVDTVKRKKNSVCKYLKNDIVDLLKNSLDY--NAYGRAEGLIEEKRRLACYEFLEQFCNC 81
Query: 83 LIEHAAKLDKPGECTDEIREAAASVMFAAGWCSELPELLFARTILADKFGSDFTEAAKDG 142
+ + + L K C DE REA +S+++AA SE+PEL R++ A+++G+ +
Sbjct: 82 VASNVSLLQKSIRCPDECREAISSLVYAAARVSEVPELRDLRSLFAERYGNTLDQ----- 136
Query: 143 TGIVDPMLVWKLSSDAKSMELKRKVTKEIAMENNIIVDFSELQDAI 188
V+P V + ++ S E+K ++ +EIA E +I D L+ +
Sbjct: 137 --FVNPEFVERFKAEPPSKEMKVELLQEIAREYSIKWDAKSLEQRL 180
>AT2G14830.1 | chr2:6362524-6365818 FORWARD LENGTH=455
Length = 454
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 79/138 (57%), Gaps = 2/138 (1%)
Query: 42 DDVRQLLTLDHLDRAIHRAEQVIAEDNMLEAFEMIEMYCKRLIEHAAKLDKPGECTDEIR 101
+D+ QLL + DRA+HRA+Q+ ++N++ + ++ + ++ + + + + + D I
Sbjct: 111 NDIAQLLRIGERDRALHRAQQLFLDENLMSLYHLLLHFSDIILLNLSYIRRRRDLPDGIN 170
Query: 102 EAAASVMFAAGWCSELPELLFARTILADKFGSDFTEAAKD--GTGIVDPMLVWKLSSDAK 159
EA ++++FA+ C +LPEL R + ++G+ F + A + V+P ++ KLS +
Sbjct: 171 EAVSTLVFASARCGDLPELRALRVLFGKRYGNHFVDTALNLLPGNCVNPQVIEKLSIISV 230
Query: 160 SMELKRKVTKEIAMENNI 177
S + K K+ EI E N+
Sbjct: 231 SDDAKSKLLGEIVEEYNL 248
>AT2G19710.1 | chr2:8506339-8509817 FORWARD LENGTH=938
Length = 937
Score = 66.6 bits (161), Expect = 7e-12, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 9/163 (5%)
Query: 24 LRIATARRPHLA-RKSIATDDVR----QLLTLDHLDRAIHRAEQVIAEDNMLEAFEMIEM 78
L++A +R L +K I +R QLL A R E V+ E+ + A+E+I +
Sbjct: 18 LQMANSRLKILKNKKEIQIKQLRRELAQLLESGQTPTARIRVEHVVREEKTVAAYELIGI 77
Query: 79 YCKRLIEHAAKLDKPGECTDEIREAAASVMFAAGWCSELPELLFARTILADKFGSDFTEA 138
YC+ L+ ++ C +++EA SV+FA+ S++PEL K+G DF+ +
Sbjct: 78 YCELLVVRLGVIESQKNCPIDLKEAVTSVLFASQRLSDVPELSEIFKQFTTKYGKDFSTS 137
Query: 139 A---KDGTGIVDPMLVWKLSSDAKSMELKRKVTKEIAMENNII 178
A + +G V +LV KLS+ A K K+ IA E+N++
Sbjct: 138 AVELRPDSG-VSRLLVEKLSAKAPDGPTKVKILMAIAEEHNVV 179
>AT1G52315.1 | chr1:19481212-19482674 FORWARD LENGTH=348
Length = 347
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 24 LRIATARRPHLARKSIATDDVRQLLTLDHLDRAIHRAEQVIAEDNMLEAFEMIEMYCKRL 83
+RI RR +A D+ L A RAE ++ E ++ +++IE +C +
Sbjct: 23 IRIDIVRRKRIAMVRNYKTDIVNFLKNGQDSEAYRRAELLLEELRIISCYDLIERFCDCI 82
Query: 84 IEHAAKLDKPGECTDEIREAAASVMFAAGWCSELPELLFARTILADKFGSDFTEAAK--- 140
E+ + + K EC +E REA +S+++A W ++PEL R + +FG+ +
Sbjct: 83 SENLSLMLKKRECPEECREAVSSLIYATAWVPDVPELKDLRAVFTKRFGNFIASSVNHEL 142
Query: 141 -DGTGIVDPMLVWKLSSDAKSMELKRKVTKEIAMENNIIVDFSELQ 185
+ T ++ P S ELK + K++A E +I D + L+
Sbjct: 143 VEKTELLRP----------PSRELKIQTVKDVANEFSINWDPTPLK 178
>AT4G32350.1 | chr4:15617634-15620642 FORWARD LENGTH=733
Length = 732
Score = 63.5 bits (153), Expect = 6e-11, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 25 RIATARRPHLARKSIATDDVRQLLTLDHLDRAIHRAEQVIAEDNMLEAFEMIEMYCKRLI 84
RI RR A D+ L+ H A RA ++ E L + + +E C +
Sbjct: 24 RIDVLRRKRNATIKFLKRDLADLIINGHDYNAFSRAGGLLDELRYLWSLDFVEQTCDFVY 83
Query: 85 EHAAKLDKPGECTDEIREAAASVMFAAGWCSELPELLFARTILADKFGSDFTEAAKDGTG 144
+ + + K EC ++ REA +S+MFAA SELPEL R + +K+
Sbjct: 84 KQLSTMQKTPECPEDCREAISSLMFAASGFSELPELRELRQMFHEKYTDSLAL------- 136
Query: 145 IVDPMLVWKLSSDAKSMELKRKVTKEIAMENNIIVDFSELQDAI 188
V+ LV +SS SME K K+ +++A+E +I D + + I
Sbjct: 137 FVNQELVENMSSKPFSMEKKVKLMEDVALEFSIRWDSKDFEKRI 180
>AT4G29440.1 | chr4:14473942-14477721 REVERSE LENGTH=1091
Length = 1090
Score = 63.2 bits (152), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
Query: 43 DVRQLLTLDHLDRAIHRAEQVIAEDNMLEAFEMIEMYCKRLIEHAAKLDKPGECTDEIRE 102
++ LL A R E V+ E+ + A+E++ +YC+ L+ +D C ++++E
Sbjct: 42 ELAHLLESGQTQTAKIRVEHVVREEKTVAAYELVGIYCELLVARLGVIDSQKTCPNDLKE 101
Query: 103 AAASVMFAAGWCSELPELLFARTILADKFGSDFTEAA---KDGTGIVDPMLVWKLSSDAK 159
A ASV++A+ +++ EL + K+G DF AA + +G V +LV KLS A
Sbjct: 102 AVASVLYASQRLTDVGELSDIVKHFSAKYGKDFVSAAIGLQPDSG-VSRLLVEKLSVKAP 160
Query: 160 SMELKRKVTKEIAMENNI 177
K K+ EIA ++N+
Sbjct: 161 DGPTKIKILTEIATQHNV 178
>AT1G34220.1 | chr1:12463102-12465911 REVERSE LENGTH=650
Length = 649
Score = 58.5 bits (140), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 33/202 (16%)
Query: 25 RIATARRPHLARKSIATDDVRQLLTLDHLDRAIHRAEQVIAEDNMLEAFEMIEMYCKRLI 84
RI R A+ ++ +LL A R E +I E+ M+ A E++E++C+ +
Sbjct: 27 RIKLIRNRREAQIKQMRREIAKLLETGQEATARIRVEHIIREEKMMAAQEILELFCELIA 86
Query: 85 EHAAKLDKPGECTDEIREAAASVMFAAGWCSELPELLFARTILADKFGSDFTEAA---KD 141
++ EC +++EA +SV FAA CS+L EL + + K+G +F AA K
Sbjct: 87 VRLPIIEAQRECPLDLKEAISSVCFAAPRCSDLTELQQVQILFVSKYGKEFVAAASELKP 146
Query: 142 GTGIVDP-----------------------------MLVWKLSSDAKSMELKRKVTKEIA 172
+G+ LV LS A S E K K+ KEIA
Sbjct: 147 DSGVNRKTESLIFIAWFSLVETRDLFMFLYFSNSILQLVELLSVRAPSPETKLKLLKEIA 206
Query: 173 MENNIIVDFSELQ-DAIKDEED 193
E+ + D + + D K ED
Sbjct: 207 EEHELDWDPASTETDLFKSHED 228
>AT3G15490.1 | chr3:5229785-5230646 FORWARD LENGTH=212
Length = 211
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 43 DVRQLLTLDHLDRAIHRAEQVIAEDNMLEAFEMIEMYCKRLIEHAAKLDKPGEC---TDE 99
D+ QLL+ A+ +A+Q ++ L A++ +E++C ++++ + L +E
Sbjct: 8 DIAQLLSYGRYSEALPKAKQFYEDERRLSAYDQVELFCTTILQNISSLKYENNVDLLPEE 67
Query: 100 IREAAASVMFAAGWCSELPELLFARTILADKFGSDF 135
++A A ++FAA EL +L R+ +FG F
Sbjct: 68 TKKAMAGIIFAASRIGELEDLQHIRSFFVQRFGLKF 103
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.134 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,476,456
Number of extensions: 127215
Number of successful extensions: 372
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 363
Number of HSP's successfully gapped: 11
Length of query: 193
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 100
Effective length of database: 8,556,881
Effective search space: 855688100
Effective search space used: 855688100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)