BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0244700 Os03g0244700|AK100620
(646 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66200.1 | chr5:26453648-26455603 REVERSE LENGTH=652 456 e-128
AT4G34940.1 | chr4:16639760-16641754 FORWARD LENGTH=665 454 e-128
AT4G36030.1 | chr4:17045084-17047096 REVERSE LENGTH=671 407 e-113
AT3G26600.1 | chr3:9769889-9771736 FORWARD LENGTH=616 172 4e-43
>AT5G66200.1 | chr5:26453648-26455603 REVERSE LENGTH=652
Length = 651
Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust.
Identities = 281/664 (42%), Positives = 378/664 (56%), Gaps = 36/664 (5%)
Query: 1 MGEGVKAMLAKPIQLADQVAKQAGW-QCFRAECMDLRSXXXXXX--XXXXXXXXXXXXXX 57
M + VK +LAKPIQL+DQV K A F+ EC +L++
Sbjct: 1 MADIVKQILAKPIQLSDQVVKAADEASSFKQECGELKAKTEKLAGLLRQAARASNDLYER 60
Query: 58 PAARIMADTVRALNKAAGMAARCFQSHSRLRRFFTLNPVSGLPRTLAMLDTALEDVAWLL 117
P RI+ DT + L KA + +C +++ ++R FT+ P + + L+ ++ DV+WLL
Sbjct: 61 PTRRIIDDTEQMLEKALSLVLKC-RANGLMKRVFTIIPAAAFRKMSGQLENSIGDVSWLL 119
Query: 118 RISSPXXXXXXXXXXXXXXXXXXPNIAQNEPILFLIWDHIARLHTGNXXXXXXXXXXXXX 177
R+S+P P IA NEPIL LIW+ IA L+TG+
Sbjct: 120 RVSAPAEDRGDAGYLGL------PPIAANEPILCLIWEQIAILYTGSLEDRSDAAASLVS 173
Query: 178 XXRDNPHFAKLIIEEDGVAPLVKLLKDGTDDGQEAAATALGLLARDEESVDKLLLAGVCS 237
RDN + KLIIEE GV PL+KLLK+G +GQE AA ALGLL RD ESV+ ++ G CS
Sbjct: 174 LARDNDRYTKLIIEEGGVVPLLKLLKEGKPEGQENAARALGLLGRDPESVEHMIHGGACS 233
Query: 238 VFAAALKVPPMRXXXXXXXXXXXXXHHNQKCQDLLAQTNAVRHLVGHLAAGTIQEHSRYY 297
VF LK PM+ ++ KCQD+ AQ NA+R LVGHLA T+QEHS+Y
Sbjct: 234 VFGKVLKEGPMKVQAVVAWATSELVSNHPKCQDVFAQHNAIRLLVGHLAFETVQEHSKYA 293
Query: 298 VAWTGSRNMNMTSL-HSVVLAKTLSVHQGGSGSPA--NEPPSSSEYPGSQQQAGKNQMQS 354
+A N TS+ H+V LAK + P +E SS +P +Q NQM +
Sbjct: 294 IA----TNNKATSIHHAVALAKENPNSTSATALPKGLDEDQSSIPHPTGKQMP--NQMHN 347
Query: 355 VVQSAMAA------KTTANGATVPPGCR-----HQLTPNGSSGRGSREAEDPXXXXXXXX 403
VV + MA K+T+NG + G + Q + SS +RE ED
Sbjct: 348 VVVNTMAVRANPPRKSTSNGVSQSNGVKQPSSVQQHQNSTSSASKTRELEDSATKCQIKA 407
Query: 404 XXXXXXXXXXRGHVGVCKSITESRALLCFAKLLEQGDGGAGTDLQFYSAMAIMEITRVAE 463
+G+ +CKSITESRALLCFA L+E+GD ++++ SAMA+MEIT VAE
Sbjct: 408 MAARALWKLAKGNSTICKSITESRALLCFAVLIEKGD----EEVRYNSAMALMEITAVAE 463
Query: 464 HNLALRQXXXXXXXXXXXXVVEQLLRIVCKGDVDDLLRPCITSLGCLSRTFTASETRVVR 523
+ LR+ VV+Q+LRI+ D +LL PCI ++G L+RTF A+ETR++
Sbjct: 464 QDADLRRSAFKPNSPACKAVVDQVLRIIEIAD-SELLIPCIRTIGNLARTFRATETRMIG 522
Query: 524 PLVELLDERELPVTKEAVVALTKFACTENHLHVSHCKAIVDGGGARHLVQLVYLGD-QVQ 582
PLV+LLDERE VT EA ALTKFACT N+LH H + I++ GG +HLVQL Y G+ VQ
Sbjct: 523 PLVKLLDEREPEVTGEAAAALTKFACTANYLHKDHSRGIIEAGGGKHLVQLAYFGEGGVQ 582
Query: 583 IEALILLCYIALHVPENEELAQAGVLAVLLWASKQPHMVQDLRVDALLPDAKGRLELFQS 642
I AL LLCYIAL+VP++E+LA+ VLAVL WASKQ + Q ++ALL +AK L+L+Q
Sbjct: 583 IPALELLCYIALNVPDSEQLAKDEVLAVLEWASKQSWVTQLESLEALLQEAKRGLDLYQQ 642
Query: 643 RASR 646
R SR
Sbjct: 643 RGSR 646
>AT4G34940.1 | chr4:16639760-16641754 FORWARD LENGTH=665
Length = 664
Score = 454 bits (1168), Expect = e-128, Method: Compositional matrix adjust.
Identities = 271/679 (39%), Positives = 378/679 (55%), Gaps = 51/679 (7%)
Query: 1 MGEGVKAMLAKPIQLADQVAKQAGW-QCFRAECMDLRSXXXXXX--XXXXXXXXXXXXXX 57
M + VK +L +PIQLADQ+ K + FR EC+++++
Sbjct: 1 MADIVKQILVRPIQLADQITKASDEAYSFRQECLEVKAKTEKLAGLLRQAARASNDLYER 60
Query: 58 PAARIMADTVRALNKAAGMAARCFQSHSRLRRFFTLNPVSGLPRTLAMLDTALEDVAWLL 117
P RI+ DT + L KA + +C ++ ++R FT+ P + + L+ ++ DV+WLL
Sbjct: 61 PTRRIIDDTEQVLFKALALVEKC-RATGLMKRVFTIIPAAAFRKITMQLENSIGDVSWLL 119
Query: 118 RISSPXXXXXXXXXXXXXXXXXXPNIAQNEPILFLIWDHIARLHTGNXXXXXXXXXXXXX 177
R+S+ P IA NEPIL LIW+ +A L TG+
Sbjct: 120 RVSA-------SGDDRDDEYLGLPPIAANEPILCLIWEQVAILFTGSLDDRSDAAASLVS 172
Query: 178 XXRDNPHFAKLIIEEDGVAPLVKLLKDGTDDGQEAAATALGLLARDEESVDKLLLAGVCS 237
RDN + +LIIEE GV L+KL K+G +GQE AA A+GLL RD ESV++++ AGVC
Sbjct: 173 LARDNDRYGRLIIEEGGVPSLLKLAKEGKMEGQENAARAIGLLGRDPESVEQIVNAGVCQ 232
Query: 238 VFAAALKVPPMRXXXXXXXXXXXXXHHNQKCQDLLAQTNAVRHLVGHLAAGTIQEHSRYY 297
VFA LK M+ ++ KCQD AQ N +R LV HLA T+QEHS+Y
Sbjct: 233 VFAKILKEGHMKVQTVVAWAVSELASNHPKCQDHFAQNNIIRFLVSHLAFETVQEHSKYA 292
Query: 298 VAWTGSRNMNMTSLHSVVLAKTLSVHQGGSGSPANEPPSSSEYPGSQQQAGKNQMQSVVQ 357
+ S ++S+H+VV+A + + +E S+ +P S Q +QM S++
Sbjct: 293 IV---SNKQTLSSIHTVVMASNTNPADKKENNEQDETKSNISHPLSNQTP--SQMHSLIA 347
Query: 358 SAMAAK--------------TTANGATVPPGCRHQ-LTPNGSSGRGS------------- 389
+ +A K T +HQ T GS+ RG+
Sbjct: 348 NTLAMKGSGPSSGSGSGSGSGTNKNQIKQSNQQHQNHTKGGSNPRGNNPTHVSLMGTSIK 407
Query: 390 -REAEDPXXXXXXXXXXXXXXXXXXRGHVGVCKSITESRALLCFAKLLEQGDGGAGTDLQ 448
RE EDP RG++ +C+SITESRALLCFA LLE+GD +++
Sbjct: 408 GREYEDPATKAQMKAMAARALWQLSRGNLQICRSITESRALLCFAVLLEKGDD----EVK 463
Query: 449 FYSAMAIMEITRVAEHNLALRQXXXXXXXXXXXXVVEQLLRIVCKGDVDDLLRPCITSLG 508
YSA+A+MEIT VAE LR+ VVEQLL+++ + ++ DLL PCI S+G
Sbjct: 464 SYSALAMMEITDVAEQYPELRRSAFKPTSPAAKAVVEQLLKVI-ENEILDLLIPCIKSIG 522
Query: 509 CLSRTFTASETRVVRPLVELLDERELPVTKEAVVALTKFACTENHLHVSHCKAIVDGGGA 568
LSRTF A+ETR++ PLV+LLDERE + EA VAL KF+CTEN L +H KAI+ GGA
Sbjct: 523 SLSRTFRATETRIIGPLVKLLDEREAEIAMEAAVALIKFSCTENFLRDNHSKAIIAAGGA 582
Query: 569 RHLVQLVYLGDQ-VQIEALILLCYIALHVPENEELAQAGVLAVLLWASKQPHMVQDLRVD 627
+HL+QLVY G+Q VQ+ AL+LLCYIAL+VP++E LAQ VL VL W++KQ H+V+ +D
Sbjct: 583 KHLIQLVYFGEQMVQVPALMLLCYIALNVPDSETLAQEEVLVVLEWSTKQAHLVEAPTID 642
Query: 628 ALLPDAKGRLELFQSRASR 646
+LP+AK RLEL+QSR SR
Sbjct: 643 EILPEAKSRLELYQSRGSR 661
>AT4G36030.1 | chr4:17045084-17047096 REVERSE LENGTH=671
Length = 670
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 259/683 (37%), Positives = 358/683 (52%), Gaps = 54/683 (7%)
Query: 1 MGEGVKAMLAKPIQLADQVAKQAGWQCF-RAECMDLRSXXXXXXXXXXXXXXXXX--XXX 57
MG+ K +L++PIQLADQV K + EC D++S
Sbjct: 1 MGDLAKQILSRPIQLADQVVKAGDEATINKQECADIKSKTEKLAALLRQAARASSDLYER 60
Query: 58 PAARIMADTVRALNKAAGMAARCFQSHSRLRRFFTLNPVSGLPRTLAMLDTALEDVAWLL 117
P RI+ DT L KA M RC + + R F + P + + ++ L+ ++ DV+WLL
Sbjct: 61 PTRRILDDTENVLEKALTMVQRC-RDDGYIMRLFNIIPAAAFRKMISQLENSVGDVSWLL 119
Query: 118 RISSPXXXXXXXXXXXXXXXXXXPNIAQNEPILFLIWDHIARLHTGNXXXXXXXXXXXXX 177
R+S+P P IA NEPIL LIW+ IA L TG+
Sbjct: 120 RVSTPAGNDDDEGFGYLGL----PPIAANEPILCLIWEQIAVLMTGSPEDKSDAAASLAS 175
Query: 178 XXRDNPHFAKLIIEEDGVAPLVKLLKDGTDDGQEAAATALGLLARDEESVDKLLLAGVCS 237
RDN + KLI+EE GV PL+KL+K+G DGQE AA +GLL RD ESV+ ++ GVCS
Sbjct: 176 LARDNDRYVKLIVEEGGVNPLLKLVKEGKIDGQENAARTIGLLGRDPESVEHMIQLGVCS 235
Query: 238 VFAAALKVPPMRXXXXXXXXXXXXXHHNQ-KCQDLLAQTNAVRHLVGHLAAGTIQEHSRY 296
V ++ LK M+ N KCQ+L AQ N +R LV HLA T+QEHS+Y
Sbjct: 236 VLSSILKEGSMKVQAVVAWAVSELVSGNHAKCQELFAQNNVIRLLVSHLAFETVQEHSKY 295
Query: 297 YVAWTGSRNMNMTSLHSVVLAKTLSVHQGGSGSPA-NEPPSSSEYPGSQQQAGKNQMQSV 355
V + +M+ H+VV+A +S + PA NE + G NQM S+
Sbjct: 296 AVVAGRATSMH----HAVVMASKISSSK--ENLPALNEEEDDDNHIGVSSPM-TNQMHSI 348
Query: 356 VQSAMAAKTTANGATV-------------PP-----------------GCRHQLTPNGSS 385
V + MA K +G+ PP G + N S
Sbjct: 349 VATTMAMKAVGSGSKSNLSSRFVTGDDDKPPEKIPEKSYSMSSQIKAYGSIAHQSRNASV 408
Query: 386 GRGSREAEDPXXXXXXXXXXXXXXXXXXRGHVGVCKSITESRALLCFAKLLEQGDGGAGT 445
RG RE EDP G+ +C+ ITESRALLCFA LL++GD
Sbjct: 409 TRG-RELEDPVTKTYMKAMAARALWKLAVGNSSICRVITESRALLCFAVLLDKGD----E 463
Query: 446 DLQFYSAMAIMEITRVAEHNLALRQXXXXXXXXXXXXVVEQLLRIVCKGDV-DDLLRPCI 504
+ ++ +AMAIMEIT VAE N LR+ VV+QL RIV D DLL PC+
Sbjct: 464 ETKYNTAMAIMEITAVAEENADLRRSAFRRTSPACKAVVDQLFRIVENADAGSDLLIPCV 523
Query: 505 TSLGCLSRTFTASETRVVRPLVELLDERELPVTKEAVVALTKFACTENHLHVSHCKAIVD 564
S+G L+RTF ++ET ++ PLV+LLD+ E + E +AL KFA +N L H + I++
Sbjct: 524 RSIGNLARTFKSAETHMIVPLVKLLDDGEPDLAAEVAIALAKFATEDNFLGKEHSRTIIE 583
Query: 565 GGGARHLVQLVYLGDQ-VQIEALILLCYIALHVPENEELAQAGVLAVLLWASKQPHMVQD 623
GG++ LVQL Y G+ QI A++LL Y+A++VP++E+LA+ VL VL W+SKQ ++++D
Sbjct: 584 AGGSKLLVQLAYFGENGAQIPAMVLLSYVAMNVPDSEQLAKDEVLTVLEWSSKQANVLED 643
Query: 624 LRVDALLPDAKGRLELFQSRASR 646
++ALL +AK RLEL+QSR SR
Sbjct: 644 EDMEALLYEAKSRLELYQSRGSR 666
>AT3G26600.1 | chr3:9769889-9771736 FORWARD LENGTH=616
Length = 615
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 158/587 (26%), Positives = 264/587 (44%), Gaps = 53/587 (9%)
Query: 58 PAARIMADTVRALNKAAGMAARCFQSHSRLRRFFTLNPVSGLPRTLAMLDTALEDVAWLL 117
P R++ D + L + + +C + H+ +RR T+ + + + +L+++ DV W+L
Sbjct: 68 PIRRVIVDVKKNLERGFALVRKC-RRHNIIRRVCTIINAADFRKVINLLESSNGDVKWIL 126
Query: 118 RISSPXXXXXXXXXXXXXXXXXXPNIAQNEPILFLIWDHIARLHTGNXXXXXXXXXXXXX 177
+ P IA N+PIL +W +A + G
Sbjct: 127 SVFD----SDGDGSFGGGIVISLPPIATNDPILPWVWSLVASIQMGKLVDKIDAANQLGS 182
Query: 178 XXRDNPHFAKLIIEEDGVAPLVKLLKDGTD-DGQEAAATALGLLARDEESVDKLLLAGVC 236
DN K+I++E GV+PL++LLK+ + +GQ AAATALGLLA DE+ V ++
Sbjct: 183 LAGDNDRNKKIIVDEGGVSPLLRLLKESSSAEGQIAAATALGLLACDEDKVRSIVNELGV 242
Query: 237 SVFAAALKVPPMRXXXXXXXXXXXXXHHNQKCQDLLAQTNAVRHLVGHLAAGTIQEHSRY 296
+ L +R H+ QD A+ + ++ LV L
Sbjct: 243 PIIVQVLGDSSVRVQIKVATLVARMAEHDPVAQDEFARQSVIKPLVTLL----------- 291
Query: 297 YVAWTGSRNMNMTSLHSVVLAKTLSVHQGGSGSPANEPPSSSEYPGSQQQAGKNQMQSVV 356
S ++ + +H L+K S+H + E SS+ + + N + +
Sbjct: 292 ------SLDVFVDDIH---LSKHNSIHSLVQMNKEVEKDPSSKLYRPLKSSKSNVYRDIG 342
Query: 357 QSAMAAKTTANGATVPPGCRHQLTPNGSSGRGSREAEDPXXXXXXXXXXXXXXXXXXRGH 416
S G R + + R+ E+P RG+
Sbjct: 343 GS---------------GSR------TGNFKKERDNENPEVKHELKVNCAEALWMLARGN 381
Query: 417 VGVCKSITESRALLCFAKLLEQGDGGAGTDLQFYSAMAIMEITRVAEHNLALRQXXXXXX 476
V + ITE++ LL AK++E+ G +LQ+ M +MEIT AE + LR+
Sbjct: 382 VANSRRITETKGLLSLAKIVEKEVG----ELQYNCLMTLMEITAAAESSADLRRAAFKTN 437
Query: 477 XXXXXXVVEQLLRIVCKGDVDDLLRPCITSLGCLSRTFTASETRVVRPLVELLDERELPV 536
V++Q+L I+ D L P I S+G L+RTF A ETR+++PLVE L V
Sbjct: 438 SPAAKAVIDQMLWIIKDVDSPILKIPAIQSIGSLARTFPARETRMIKPLVEKLGSSNQEV 497
Query: 537 TKEAVVALTKFACTENHLHVSHCKAIVDGGGARHLVQLVY-LGDQVQIEALILLCYIALH 595
AV++L KF C EN L H K I++ G L++L+ + Q+Q++ L LLCY++++
Sbjct: 498 AITAVISLQKFVCPENFLCAEHSKNIIEYGAIPLLMKLIRNVEQQMQLQCLALLCYLSVN 557
Query: 596 VPENEELAQAGVLAVLLWASKQPHMVQDLRVDALLPDAKGRLELFQS 642
+++L QA VL VL A + + Q++ + L+ A +L L+ +
Sbjct: 558 ASNHQQLEQAKVLTVLEGAERLAGL-QNMELRELVSKAIYQLSLYNA 603
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,111,825
Number of extensions: 375841
Number of successful extensions: 1089
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1058
Number of HSP's successfully gapped: 5
Length of query: 646
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 541
Effective length of database: 8,227,889
Effective search space: 4451287949
Effective search space used: 4451287949
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)