BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0243100 Os03g0243100|AK104056
(143 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144 231 1e-61
AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142 217 2e-57
AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147 177 1e-45
AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141 177 1e-45
AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141 175 8e-45
AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151 175 8e-45
AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140 170 2e-43
AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138 169 4e-43
AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140 166 3e-42
AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138 161 1e-40
AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138 159 4e-40
AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134 101 1e-22
>AT2G16700.1 | chr2:7244717-7245467 FORWARD LENGTH=144
Length = 143
Score = 231 bits (588), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 105/143 (73%), Positives = 125/143 (87%)
Query: 1 MAMAYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEEL 60
MAMA+KMAT GM V +EC FM+MKWKKVHR++V+KI+E+SR V VDKVGG GE Y +L
Sbjct: 1 MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60
Query: 61 VAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDG 120
+LP DDCRYAVFDFDFVTVDNC+KSKIFFIAWSP AS+IRAKILYATSK GLRRVL+G
Sbjct: 61 EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120
Query: 121 VHYEVQATDSSEMGYDVIRGRAQ 143
+HYE+QATD +EMG+D+I+ RA+
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143
>AT4G34970.1 | chr4:16653784-16654593 FORWARD LENGTH=142
Length = 141
Score = 217 bits (552), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 99/141 (70%), Positives = 120/141 (85%)
Query: 3 MAYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVA 62
MA K AT GM + ++C++ FMEMKWKKVHR+VVYK++E+SR V VDKVG GE Y++L A
Sbjct: 1 MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60
Query: 63 ALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVH 122
+LP DDCRYAVFDFD+VTVDNC+ SKIFFI WSP ASRIR K++YATSK GLRRVLDGVH
Sbjct: 61 SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120
Query: 123 YEVQATDSSEMGYDVIRGRAQ 143
YE+QATD +EMG+D I+ RA+
Sbjct: 121 YELQATDPTEMGFDKIQDRAK 141
>AT2G31200.1 | chr2:13294171-13294948 FORWARD LENGTH=147
Length = 146
Score = 177 bits (450), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 106/142 (74%)
Query: 2 AMAYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELV 61
++ A GM V +E + F+E++ KK HR+VV+KIDE + V+V+K G P E Y++ +
Sbjct: 5 GLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFL 64
Query: 62 AALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGV 121
A+LP +DCRYAV+DFDFVT +NCQKSKIFF AWSP+ S IRAK+LY+TSK L R L G+
Sbjct: 65 ASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGI 124
Query: 122 HYEVQATDSSEMGYDVIRGRAQ 143
HYE+QATD +E+ +V+R RA
Sbjct: 125 HYEIQATDPTEVDLEVLRERAN 146
>AT1G01750.1 | chr1:275528-276126 FORWARD LENGTH=141
Length = 140
Score = 177 bits (450), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 106/136 (77%)
Query: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
+ GM+V +EC+ F+E+K K+ +RF+V+KIDE+++ V++DK+G P E YE+ ++P D
Sbjct: 4 SASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPED 63
Query: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
+CRYAV+D+DF T +NCQKSKIFFIAWSP SR+R+K+LYA+SK +R LDG+ E+QA
Sbjct: 64 ECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQA 123
Query: 128 TDSSEMGYDVIRGRAQ 143
TD SEM D+I+GR
Sbjct: 124 TDPSEMSLDIIKGRVN 139
>AT4G00680.1 | chr4:279780-280608 REVERSE LENGTH=141
Length = 140
Score = 175 bits (443), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 106/134 (79%)
Query: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
+ GM+V +EC+ F+E+K K+ +RF+V+KIDE+++ V ++K+G P E Y++ +++P D
Sbjct: 4 SASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDD 63
Query: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
+CRYAV+DFDF T DNCQKSKIFFIAWSP SR+R+K+LYA+SK +R ++G+ E+QA
Sbjct: 64 ECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQA 123
Query: 128 TDSSEMGYDVIRGR 141
TD SEM D+I+GR
Sbjct: 124 TDPSEMSLDIIKGR 137
>AT3G46010.2 | chr3:16909679-16910678 REVERSE LENGTH=151
Length = 150
Score = 175 bits (443), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 103/136 (75%)
Query: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
A GM V ++C+ F+E+K K+ HRF+VYKI+E+ + V+V+KVG P + YEE A LP D
Sbjct: 15 AASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPAD 74
Query: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
+CRYA++DFDFVT +NCQKSKIFFIAW P +++R+K++YA+SK +R LDG+ E+QA
Sbjct: 75 ECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQA 134
Query: 128 TDSSEMGYDVIRGRAQ 143
TD +EM DV R RA
Sbjct: 135 TDPTEMDLDVFRSRAN 150
>AT5G59890.1 | chr5:24122545-24123596 FORWARD LENGTH=140
Length = 139
Score = 170 bits (431), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 103/134 (76%)
Query: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
A GM V ++C+ F+E+K K+ HRF+VYKI+E+ + V+V+KVG P YE+ A+LP D
Sbjct: 4 AASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPAD 63
Query: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
+CRYA++DFDFVT +NCQKSKIFFIAW P +++R+K++YA+SK +R LDG+ E+QA
Sbjct: 64 ECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQA 123
Query: 128 TDSSEMGYDVIRGR 141
TD +EM DV++ R
Sbjct: 124 TDPTEMDLDVLKSR 137
>AT4G25590.1 | chr4:13059137-13060050 REVERSE LENGTH=138
Length = 137
Score = 169 bits (428), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 106/135 (78%), Gaps = 2/135 (1%)
Query: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
A GM V++EC+ F+E+K K+ +RF++++ID + V+V+K+G P E Y++ A+LP +
Sbjct: 4 AASGMAVEDECKLKFLELKSKRNYRFIIFRID--GQQVVVEKLGNPDETYDDFTASLPAN 61
Query: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
+CRYAVFDFDF+T +NCQKSKIFFIAWSP +SR+R K++YA+SK +R LDG+ E+QA
Sbjct: 62 ECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121
Query: 128 TDSSEMGYDVIRGRA 142
TD SEM +D+I+ RA
Sbjct: 122 TDPSEMSFDIIKSRA 136
>AT5G59880.1 | chr5:24120382-24121628 FORWARD LENGTH=140
Length = 139
Score = 166 bits (421), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 103/136 (75%)
Query: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
A GM V ++C+ FME+K K+ HRF++YKI+E + V+V+K+G PG+ +E+L A+LP D
Sbjct: 4 AASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPAD 63
Query: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
+CRYA+FDFDFV+ + +S+IFF+AWSP +R+R+K++YA+SK +R LDG+ E+QA
Sbjct: 64 ECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQA 123
Query: 128 TDSSEMGYDVIRGRAQ 143
TD +EM DV + RA
Sbjct: 124 TDPTEMDLDVFKSRAN 139
>AT3G46000.1 | chr3:16907743-16908822 REVERSE LENGTH=138
Length = 137
Score = 161 bits (407), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 100/136 (73%), Gaps = 2/136 (1%)
Query: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
A GM V ++C+ FME+K K+ R +VYKI+++ V+V+K+G P + Y++ A+LP D
Sbjct: 4 AASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQ--VIVEKLGEPEQSYDDFAASLPAD 61
Query: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
DCRY ++DFDFVT +NCQKSKIFFIAWSP +++R K++YA+SK +R LDG+ E+QA
Sbjct: 62 DCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQA 121
Query: 128 TDSSEMGYDVIRGRAQ 143
TD +EMG DV + R
Sbjct: 122 TDPTEMGLDVFKSRTN 137
>AT5G52360.1 | chr5:21258157-21259229 REVERSE LENGTH=138
Length = 137
Score = 159 bits (403), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 101/135 (74%), Gaps = 2/135 (1%)
Query: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTD 67
A GM V++EC+ F+E+K K+ +RF++++ID + V+V+K+G P E Y++ LP +
Sbjct: 4 AASGMAVEDECKLKFLELKAKRNYRFIIFRID--GQQVVVEKLGSPQENYDDFTNYLPPN 61
Query: 68 DCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQA 127
+CRYAV+DFDF T +N QKSKIFFIAWSP +SR+R K++YA+SK +R LDG+ E+QA
Sbjct: 62 ECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQA 121
Query: 128 TDSSEMGYDVIRGRA 142
TD SEM D+I+ RA
Sbjct: 122 TDPSEMSLDIIKSRA 136
>AT3G45990.1 | chr3:16900778-16904136 REVERSE LENGTH=134
Length = 133
Score = 101 bits (252), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 84/136 (61%), Gaps = 11/136 (8%)
Query: 12 MNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKV------GGPGEGYEELVAALP 65
M + ++C+ F+E+K ++ R +VYKI E + V+V+K G + YEE +LP
Sbjct: 1 MVLHDDCKLTFLELKERRTFRSIVYKI-EDNMQVIVEKHHYKKMHGEREQSYEEFANSLP 59
Query: 66 TDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEV 125
D+CRYA+ D +FV + KI FIAWSP+ +++R K++Y+++K +R LDG+ E
Sbjct: 60 ADECRYAILDIEFVPGER----KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEF 115
Query: 126 QATDSSEMGYDVIRGR 141
ATD +++ D IR R
Sbjct: 116 HATDLTDISLDAIRRR 131
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,015,653
Number of extensions: 114246
Number of successful extensions: 226
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 221
Number of HSP's successfully gapped: 12
Length of query: 143
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 54
Effective length of database: 8,666,545
Effective search space: 467993430
Effective search space used: 467993430
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 106 (45.4 bits)