BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0241900 Os03g0241900|AK111568
(482 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17840.1 | chr2:7755923-7757798 REVERSE LENGTH=453 369 e-102
AT3G51250.1 | chr3:19028227-19030442 FORWARD LENGTH=464 356 1e-98
AT4G35985.1 | chr4:17032268-17033862 REVERSE LENGTH=449 346 2e-95
AT4G15450.1 | chr4:8839437-8841162 FORWARD LENGTH=382 143 2e-34
AT3G21600.1 | chr3:7606735-7608364 REVERSE LENGTH=375 130 2e-30
AT3G21590.1 | chr3:7604636-7605789 REVERSE LENGTH=199 52 1e-06
>AT2G17840.1 | chr2:7755923-7757798 REVERSE LENGTH=453
Length = 452
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/458 (43%), Positives = 275/458 (60%), Gaps = 40/458 (8%)
Query: 6 SLYPEVNQSHPDLNTAFLANPNRAATASPGGSLYPSVDPQQLAENLF----XXXXXXXXX 61
SLYP V+ S+P+ P +++S +LYPS+D LA NLF
Sbjct: 11 SLYPTVDTSNPEA-------PINPSSSSSTNNLYPSLDMNDLARNLFPEQPETSSIPVSA 63
Query: 62 XXXXXXXXLVAVPGAQLHLVDPDRSMDLGAGTLSVVRLRQGDHSVAVLARLVPEKRSQRR 121
++ + GA LHL+D S++L G L ++R+ QG++ VAVLA + E
Sbjct: 64 PPAATEEVILKISGAILHLIDKSYSVELACGDLEIIRIVQGENVVAVLASVSDE------ 117
Query: 122 XXXXXXXXXXXXXXXXXXQEPVQWPLTRDVAAVKLDTAHYFFSLHVPHTDHXXXXXXXXX 181
+QWPLT+D +VK+D +HYFF+L P +
Sbjct: 118 ---------------------IQWPLTKDENSVKVDESHYFFTLR-PTKEISHDSSDEED 155
Query: 182 XXXXXXXXXXLSYGLTVASKGQEAVLAQLDKVLEEYTTFSVKQVEPAAKEKSE-VMDTKA 240
L+YGLT+ASKGQE +L +L+K+LE+Y++FSV++V AKE E V+D
Sbjct: 156 GDGGKNTNEMLNYGLTIASKGQEHLLVELEKILEDYSSFSVQEVSEEAKEAGEKVLDVTV 215
Query: 241 VTEITPEEAVGDKKEVVEEQSAAFWTTIAPNVDDYSSSVARLIARGSGQLVRGIIWCGDI 300
E +P E G++KE+VE Q +A+WTT+APNV+DYS A+LIA GSG L++GI+WCGD+
Sbjct: 216 ARETSPVELTGERKEIVERQCSAYWTTLAPNVEDYSGKAAKLIATGSGHLIKGILWCGDV 275
Query: 301 TAEGLRCGEAVVKKSVGPSGKPSQVKPSTIRRMKRARRVTKMSNRVANSILSGVLKVSGF 360
T + L G +K+ + + K S+V P T++R++R +R+TKM+ VANSILSGVLKVSGF
Sbjct: 276 TMDRLIWGNGFMKRRLSKAEKESEVHPDTLKRIRRVKRMTKMTESVANSILSGVLKVSGF 335
Query: 361 VTSTVLNSKPAQKFFKLMLGEVILASLDGFGKVWDAVEVSGKNVMRXXXXXXXXXXXHRY 420
TS+V N+K +KFF L+ GEVILASLDGF KV DAVEV+G+NVM H+Y
Sbjct: 336 FTSSVANTKVGKKFFSLLPGEVILASLDGFNKVCDAVEVAGRNVMSTSSTVTTELVDHKY 395
Query: 421 GDQAGQVTQDYLHASGNALGVAWAVFKIRKALDPKGNL 458
G +A + T + L A+G ALG AW FKIRKA++PK L
Sbjct: 396 GGKAAEATNEGLDAAGYALGTAWVAFKIRKAINPKSVL 433
>AT3G51250.1 | chr3:19028227-19030442 FORWARD LENGTH=464
Length = 463
Score = 356 bits (914), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/460 (41%), Positives = 267/460 (58%), Gaps = 42/460 (9%)
Query: 6 SLYPEVNQSHPDLNTAFLANPNRAATASPGGSLYPSVDPQQLAENLF-----XXXXXXXX 60
++YP+V+QS PD A+ N +SP LYPS+ L NLF
Sbjct: 14 AMYPQVDQSIPD---NPFASTNPYVASSP--YLYPSLSSHNLGPNLFPDHGDASNDQSPS 68
Query: 61 XXXXXXXXXLVAVPGAQLHLVDPDRSMDLGAGTLSVVRLRQGDHSVAVLARLVPEKRSQR 120
L+ VPGA L+L+D S++L G ++VR+ QG + VAVLA + E
Sbjct: 69 APPQATEEVLIRVPGAILNLIDKSYSVELACGDFTIVRIIQGQNIVAVLANVGNE----- 123
Query: 121 RXXXXXXXXXXXXXXXXXXQEPVQWPLTRDVAAVKLDTAHYFFSLHVP----HTDHXXXX 176
+QWPLT++ A K+D +HYFFS+H P
Sbjct: 124 ----------------------IQWPLTKNEVAAKVDGSHYFFSIHPPKEKGQGSGSDSD 161
Query: 177 XXXXXXXXXXXXXXXLSYGLTVASKGQEAVLAQLDKVLEEYTTFSVKQVEPAAKEK-SEV 235
L+YGLT+ASKGQE VL LD+VL +Y+ F+ +++ AKE EV
Sbjct: 162 DEQGQKSKSKSDDEILNYGLTIASKGQENVLLVLDQVLRDYSCFTEQRMSEKAKETGEEV 221
Query: 236 MDTKAVTEITPEEAVGDKKEVVEEQSAAFWTTIAPNVDDYSSSVARLIARGSGQLVRGII 295
+ V + +PEE G++K+VVE Q AA+WTT+APNV+DY+ S A++IA GSG+L+RGI+
Sbjct: 222 LGNSVVADTSPEELKGERKDVVEGQCAAYWTTLAPNVEDYTHSTAKMIASGSGKLIRGIL 281
Query: 296 WCGDITAEGLRCGEAVVKKSVGPSGKPSQVKPSTIRRMKRARRVTKMSNRVANSILSGVL 355
WCGD+T E L+ G V+K + + K V P T+RR+KR +RVT+M+ +VA +LSGV+
Sbjct: 282 WCGDVTVERLKKGNEVMKNRLSRAEKEKDVSPETLRRIKRVKRVTQMTEKVATGVLSGVV 341
Query: 356 KVSGFVTSTVLNSKPAQKFFKLMLGEVILASLDGFGKVWDAVEVSGKNVMRXXXXXXXXX 415
KVSGF+T ++ NSK +K F L+ GE++LASLDGF K+ DAVEV+GKNVM
Sbjct: 342 KVSGFITGSMANSKAGKKLFGLLPGEIVLASLDGFSKICDAVEVAGKNVMSTSSTVTTEL 401
Query: 416 XXHRYGDQAGQVTQDYLHASGNALGVAWAVFKIRKALDPK 455
HRYG +A + T + L A+G+A G AW FKIRKA +PK
Sbjct: 402 VNHRYGTKAAEATNEGLDAAGHAFGTAWVAFKIRKAFNPK 441
>AT4G35985.1 | chr4:17032268-17033862 REVERSE LENGTH=449
Length = 448
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/459 (40%), Positives = 273/459 (59%), Gaps = 52/459 (11%)
Query: 7 LYPEVNQSHPDLNTAFLANPNRAATASPGGSLYPSVDPQQLAENLFXXXXXXXXXXX--X 64
LYP V+ S A L + +++++ +LYPS++ L N+F
Sbjct: 10 LYPTVDTS---TTVAPLPKSSSSSSSTNNNNLYPSINVNDLVNNIFPDPTASDSASAPPL 66
Query: 65 XXXXXLVAVPGAQLHLVDPDRSMDLGAGTLSVVRLRQGDHSVAVLARLVPEKRSQRRXXX 124
++ + GA +HL+D S++L G L ++RL QGD +VAV AR+ E
Sbjct: 67 ATEEVILTIHGAMVHLIDKSYSVELACGDLEILRLVQGDITVAVFARVGDE--------- 117
Query: 125 XXXXXXXXXXXXXXXQEPVQWPLTRDVAAVKLDTAHYFFSL----HVPHTDHXXXXXXXX 180
+QWPLT+D AVK+D +HYFFSL +DH
Sbjct: 118 ------------------IQWPLTKDEPAVKVDESHYFFSLRPVKESESSDH-------- 151
Query: 181 XXXXXXXXXXXLSYGLTVASKGQEAVLAQLDKVLEEYTTFSVKQVEPAAKEKSE-VMDTK 239
L+YGLT+ASKGQE +L +LDK+L +Y++F+ ++ K+K E V+D
Sbjct: 152 --SVNETENEMLNYGLTMASKGQEPMLEKLDKILADYSSFTAEE-----KQKEENVLDLT 204
Query: 240 AVTEITPEEAVGDKKEVVEEQSAAFWTTIAPNVDDYSSSVARLIARGSGQLVRGIIWCGD 299
A E +PEE G +K++VE+Q A+WTT+APNV+DYS A+LIA GSGQL++GI+WCGD
Sbjct: 205 AAKETSPEELKGKRKKMVEKQCTAYWTTLAPNVEDYSGVAAKLIAAGSGQLIKGILWCGD 264
Query: 300 ITAEGLRCGEAVVKKSVGPSGKPSQVKPSTIRRMKRARRVTKMSNRVANSILSGVLKVSG 359
+T + L G +KK + + K QV P T++R+KR +++TKM+ +VAN +LSGV+KVSG
Sbjct: 265 LTMDRLMWGNDFMKKKLSKAEKERQVSPGTLKRLKRVKKMTKMTEKVANGVLSGVVKVSG 324
Query: 360 FVTSTVLNSKPAQKFFKLMLGEVILASLDGFGKVWDAVEVSGKNVMRXXXXXXXXXXXHR 419
F +S+V+NSK QK F L+ GE++LA+LDGF KV DAVEV+G++VM+ H+
Sbjct: 325 FFSSSVINSKAGQKLFGLLPGEMVLATLDGFNKVCDAVEVAGRHVMKTTSDVTTEIVDHK 384
Query: 420 YGDQAGQVTQDYLHASGNALGVAWAVFKIRKALDPKGNL 458
YG + Q T + L A+G+A G AW VFKIR+AL+PK +
Sbjct: 385 YGAKTAQATNEGLSAAGHAFGTAWTVFKIRQALNPKSAM 423
>AT4G15450.1 | chr4:8839437-8841162 FORWARD LENGTH=382
Length = 381
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 177/396 (44%), Gaps = 78/396 (19%)
Query: 70 LVAVPGAQLHLVDPDRSMDLGAGTLSVVRLRQGDHSVAVLARLVPEKRSQRRXXXXXXXX 129
L+ + G + HL++ +++L AG +V++ + ++A++ R+
Sbjct: 38 LLQIHGCRAHLINGSEAVELAAGDFELVQVLDSNVALAMVVRI----------------- 80
Query: 130 XXXXXXXXXXQEPVQWPLTRDVAAVKLDTAHYFFSLHVPHTDHXXXXXXXXXXXXXXXXX 189
+QWP+ +D VKLD+ Y F+L V +
Sbjct: 81 ----------GNDLQWPVIKDEPVVKLDSRDYLFTLPVKDGE------------------ 112
Query: 190 XXLSYGLTVASKGQEAV-----LAQLDKVLEEYTTFSVKQVEPAAKEKSEVMDTKAVTEI 244
LSYG+T + + + LD L E + FS ++ S
Sbjct: 113 -PLSYGITFFPIDENDIVFVNSIELLDDFLRENSCFSSSPSSSSSSSSSSSSSV------ 165
Query: 245 TPEEAVGDKKEVVEEQSAAFWTTIAPNVDDYSSSVARLIARGSGQLVRGIIWCGD-ITAE 303
+ W AP ++DY++ VA+ IA G+G ++RG+ C + T +
Sbjct: 166 ---------------NNGIDWKEFAPKIEDYNNVVAKAIAGGTGHIIRGMFKCSNAYTNQ 210
Query: 304 GLRCGEAVVKKSVGPSGKPSQVKPSTIRR-----MKRARRVTKMSNRVANSILSGVLKVS 358
+ GE ++ K+ +G S+ +T + ++R R++++ + +++ ++L+GV VS
Sbjct: 211 VHKGGEIMITKAEKKNGASSKRNATTNKNQINKNLQRVRKLSRATEKLSKTMLNGVGVVS 270
Query: 359 GFVTSTVLNSKPAQKFFKLMLGEVILASLDGFGKVWDAVEVSGKNVMRXXXXXXXXXXXH 418
G V V+ SKP + FF ++ GEV+LASLD K+ DA E + + +
Sbjct: 271 GSVMGPVVKSKPGKAFFSMVPGEVLLASLDALNKLLDAAEAAERQTLSATSKATTRMVSE 330
Query: 419 RYGDQAGQVTQDYLHASGNALGVAWAVFKIRKALDP 454
R G+ AG+ T+D L G+A G AW VF IRKA P
Sbjct: 331 RLGESAGEATKDVLGTVGHAAGTAWNVFNIRKAFSP 366
>AT3G21600.1 | chr3:7606735-7608364 REVERSE LENGTH=375
Length = 374
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 173/403 (42%), Gaps = 91/403 (22%)
Query: 70 LVAVPGAQLHLVDPDRSMDLGAGTLSVVRLRQGDHSVAVLARLVPEKRSQRRXXXXXXXX 129
L+ +P ++HL+ +++L +G +V++ ++A++ R+
Sbjct: 38 LLQIPRCRVHLIGESEAVELASGDFKLVKVSDNGVTLAMIVRI----------------- 80
Query: 130 XXXXXXXXXXQEPVQWPLTRDVAAVKLDTAHYFFSLHVPHTDHXXXXXXXXXXXXXXXXX 189
+QWP+ RD VKLD Y F+L V D
Sbjct: 81 ----------GHDLQWPVIRDEPVVKLDARDYLFTLPVKDGD------------------ 112
Query: 190 XXLSYGLTVASKGQEAVLAQ----LDKVLEEYTTFSVKQVEPAAKEKSEVMDTKAVTEIT 245
LSYG+T + ++ L LD+ L E + FS A+ + + +D
Sbjct: 113 -PLSYGVTFSGDDRDVALVNSLKLLDQFLSENSCFS----STASSKVNNGID-------- 159
Query: 246 PEEAVGDKKEVVEEQSAAFWTTIAPNVDDYSSSVARLIARGSGQLVRGIIWCGDITAEGL 305
W AP ++DY++ VA+ IA G+G ++RGI + + +
Sbjct: 160 -------------------WQEFAPRIEDYNNVVAKAIAGGTGHIIRGIFSLSNAYSNQV 200
Query: 306 -RCGEAVVKK--------SVGPSGKPSQVKPSTIR-RMKRARRVTKMSNRVANSILSGVL 355
+ G+ ++ K S K + I ++R R+++K + ++ ++L+G
Sbjct: 201 HKGGDIMITKAEESQRNGSYNNGNSSGNEKKNGINTHLQRVRKLSKATENLSKTMLNGAG 260
Query: 356 KVSGFVTSTVLNSKPAQKFFKLMLGEVILASLDGFGKVWDAVEVSGKNVMRXXXXXXXXX 415
VSG V ++ SKP FF ++ GEV+LASLD K+ DA E + + +
Sbjct: 261 VVSGSVMVPMMKSKPGMAFFSMVPGEVLLASLDALNKILDATEAAERQTLSATSRAATRM 320
Query: 416 XXHRYGDQAGQVTQDYLHASGNALGVAWAVFKIRKALDPKGNL 458
R+GD AG+ T D L +G+A G AW V KIRK P +L
Sbjct: 321 VSERFGDNAGEATGDVLATAGHAAGTAWNVLKIRKTFYPSSSL 363
>AT3G21590.1 | chr3:7604636-7605789 REVERSE LENGTH=199
Length = 198
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 276 SSSVARLIARGSGQLVRGIIWCGDITAEGLRCGEAVVKKSVGPSGKPSQVK--------- 326
SS+ A+ IA G+G +++GI C + ++ + + ++ SG SQ+
Sbjct: 65 SSTSAKAIAVGTGHIIKGIFTCSNSYSKKIHEEGTIAEEDEERSGDISQIDGGGNNETNK 124
Query: 327 -PSTIRRMKRARRVTKMSNRVANSILSGVLKVSGFVTSTVLNSKPAQKFFKLMLGEVILA 385
+ ++RA ++ K+S + + L G VS + + V+ SK + GEVILA
Sbjct: 125 KNKLNKNLQRAEKLWKVSEAIGMAALEGGDLVSSSMIAPVVKSKLGKALLSTAPGEVILA 184
Query: 386 SLDGFGKVWDAV 397
SLD F K +D V
Sbjct: 185 SLDSFHKHFDVV 196
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.130 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,881,308
Number of extensions: 263111
Number of successful extensions: 763
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 749
Number of HSP's successfully gapped: 6
Length of query: 482
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 380
Effective length of database: 8,310,137
Effective search space: 3157852060
Effective search space used: 3157852060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)