BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0223700 Os03g0223700|AK068416
         (711 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01690.2  | chr2:309144-313499 REVERSE LENGTH=745              999   0.0  

>AT2G01690.2 | chr2:309144-313499 REVERSE LENGTH=745
          Length = 744

 Score =  999 bits (2584), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/735 (69%), Positives = 585/735 (79%), Gaps = 29/735 (3%)

Query: 3   ADALSIIPGAVLRNLSDKLYEKRKNAALEIEGIVKQLATSGEHDKISAVIALLTNDFTMS 62
           +DALS IP AV RNLSDKLYEKRKNAALE+E IVK L +SG+HDKIS VI +L  +F  S
Sbjct: 2   SDALSAIPAAVHRNLSDKLYEKRKNAALELENIVKNLTSSGDHDKISKVIEMLIKEFAKS 61

Query: 63  PQANHRKGGLIGLAAVTVGLTSEAAQHLEQIVPPVLTSFLDQDSRVRYYACEALYNIAKV 122
           PQANHRKGGLIGLAAVTVGL++EAAQ+LEQIVPPV+ SF DQDSRVRYYACEALYNIAKV
Sbjct: 62  PQANHRKGGLIGLAAVTVGLSTEAAQYLEQIVPPVINSFSDQDSRVRYYACEALYNIAKV 121

Query: 123 VRGDFIIYFNKIFDALCKLSADSDANVQSAAHLLDRLVK-DIVTESDQFSIEEFIPLLRE 181
           VRGDFII+FNKIFDALCKLSADSDANVQSAAHLLDRLVK DIVTESDQFSIEEFIPLL+E
Sbjct: 122 VRGDFIIFFNKIFDALCKLSADSDANVQSAAHLLDRLVKQDIVTESDQFSIEEFIPLLKE 181

Query: 182 RMNVLNPYVRQFLVGWITVLDSVPDIDMXXXXXXXXXXXXNMLSDSSHEIRQQADAALSE 241
           RMNVLNPYVRQFLVGWITVLDSVPDIDM            NMLSDSSHEIRQQAD+ALSE
Sbjct: 182 RMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSE 241

Query: 242 FLQEIKNSPNVDYGRMAEILVRRAGSSDEFTRLTSITWINEFVKLGGEQLVPYYADILGA 301
           FLQEIKNSP+VDYGRMAEILV+RA S DEFTRLT+ITWINEFVKLGG+QLV YYADILGA
Sbjct: 242 FLQEIKNSPSVDYGRMAEILVQRAASPDEFTRLTAITWINEFVKLGGDQLVRYYADILGA 301

Query: 302 ILPCISDQEEKIRVVARETNEELCAIKADPTEGFDIGAILSIAKRELNSEHEATRIESLH 361
           ILPCISD+EEKIRVVARETNEEL +I  +P++GFD+GAILS+A+R+L+SE EATRIE+L+
Sbjct: 302 ILPCISDKEEKIRVVARETNEELRSIHVEPSDGFDVGAILSVARRQLSSEFEATRIEALN 361

Query: 362 WFSTLLVRYRAEFLAYLNDIFDPLLNALSDPSDAVVLLVLEVHARIAEESHHFHHLVSYL 421
           W STLL ++R E L +LNDIFD LL ALSD SD VVLLVLEVHA +A++  HF  L+ +L
Sbjct: 362 WISTLLNKHRTEVLCFLNDIFDTLLKALSDSSDDVVLLVLEVHAGVAKDPQHFRQLIVFL 421

Query: 422 IHTFHNNHVLLEKRGALIVRRLCILLGAEKVYREFSTILETEGDLEFASTMVQALNLILL 481
           +H F  ++ LLE+RGALIVRR+C+LL AE+VYRE STILE E +L+FASTMVQALNLILL
Sbjct: 422 VHNFRADNSLLERRGALIVRRMCVLLDAERVYRELSTILEGEDNLDFASTMVQALNLILL 481

Query: 482 TSTELAELRSLLKKTLVDSCGKDLFQSLYASWCHSPMATISLCLLAQAYNHAISVIQSLG 541
           TS EL++LR LLK +LV+  GK+LF +LY SWCHSPMA ISLCLLAQAY HA  VIQSL 
Sbjct: 482 TSPELSKLRELLKGSLVNREGKELFVALYTSWCHSPMAIISLCLLAQAYQHASVVIQSLV 541

Query: 542 EEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGKHTWXXXXXXXXXXXXPQQSAAFKI 601
           EEDINVKFLVQLDKLIRLLETP+F YLRLQLLEPG++TW            PQQSAAFKI
Sbjct: 542 EEDINVKFLVQLDKLIRLLETPIFTYLRLQLLEPGRYTWLLKTLYGLLMLLPQQSAAFKI 601

Query: 602 LRTRLKTVP---FS--ENLKRTSSTNPYSQILQVTEDGNRNHD--TQSYNAINFPSRLHQ 654
           LRTRLKTVP   FS    + R +S  P+SQ     EDG+   D    S+  INF  RL Q
Sbjct: 602 LRTRLKTVPTYSFSTGNQIGRATSGVPFSQYKHQNEDGDLEDDNINSSHQGINFAVRLQQ 661

Query: 655 FESMQQQHRVHLKNQLQSQKSASAIVLSQEIQRYEE---------------------AHS 693
           FE++Q  HR   + ++     +S+   S+E++R EE                     + S
Sbjct: 662 FENVQNLHRGQARTRVNYSYHSSSSSTSKEVRRSEEQQQQQQQQQQQQQQQQRPPPSSTS 721

Query: 694 SSTSEIGRPPSRTSR 708
           SS ++  RPPSRTSR
Sbjct: 722 SSVADNNRPPSRTSR 736



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.134    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,374,717
Number of extensions: 510824
Number of successful extensions: 1599
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1591
Number of HSP's successfully gapped: 1
Length of query: 711
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 605
Effective length of database: 8,200,473
Effective search space: 4961286165
Effective search space used: 4961286165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)