BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0223400 Os03g0223400|AB180688
(357 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G37600.1 | chr5:14933574-14935656 REVERSE LENGTH=357 659 0.0
AT5G16570.1 | chr5:5421898-5424523 REVERSE LENGTH=357 653 0.0
AT1G66200.3 | chr1:24655520-24657520 REVERSE LENGTH=366 652 0.0
AT3G17820.1 | chr3:6097503-6099408 FORWARD LENGTH=355 630 0.0
AT5G35630.1 | chr5:13831220-13833239 FORWARD LENGTH=431 591 e-169
AT1G48470.1 | chr1:17913784-17915926 FORWARD LENGTH=354 581 e-166
>AT5G37600.1 | chr5:14933574-14935656 REVERSE LENGTH=357
Length = 356
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/354 (86%), Positives = 337/354 (95%)
Query: 1 MANLTDLVNLNLSDCSDKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSST 60
M+ ++DL+NLNLSD +DKIIAEYIWVGGSG+D+RSKART+ GP+TD SQLPKWNYDGSST
Sbjct: 1 MSLVSDLINLNLSDSTDKIIAEYIWVGGSGMDMRSKARTLPGPVTDPSQLPKWNYDGSST 60
Query: 61 GQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRHSAAKIFSHPDVV 120
GQAPGEDSEVILYPQAIFKDPFRRG+NILVMCD YTP GEPIPTNKRH+AAK+FS+PDV
Sbjct: 61 GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKVFSNPDVA 120
Query: 121 AEVPWYGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCAAGAEKAFGRDIVDAHYKACI 180
AEVPWYGIEQEYTLLQKDV WP+GWP+GG+PGPQGPYYC GA+K+FGRD+VD+HYKAC+
Sbjct: 121 AEVPWYGIEQEYTLLQKDVKWPVGWPIGGYPGPQGPYYCGIGADKSFGRDVVDSHYKACL 180
Query: 181 YAGINISGINGEVMPGQWEFQVGPSVGIAAADQVWVARYILERVTEVAGVVLSLDPKPIP 240
YAGINISGINGEVMPGQWEFQVGP+VGI+AAD++WVARYILER+TE+AGVV+S DPKPIP
Sbjct: 181 YAGINISGINGEVMPGQWEFQVGPAVGISAADEIWVARYILERITEIAGVVVSFDPKPIP 240
Query: 241 GDWNGAGAHTNFSTKSMREPGGYEVIKKAIDKLALRHKEHIAAYGEGNERRLTGRHETAD 300
GDWNGAGAH N+STKSMRE GGYE+IKKAIDKL LRHKEHIAAYGEGNERRLTG HETAD
Sbjct: 241 GDWNGAGAHCNYSTKSMREEGGYEIIKKAIDKLGLRHKEHIAAYGEGNERRLTGHHETAD 300
Query: 301 INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLLW 354
INTF WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPY+VT MIAETT+LW
Sbjct: 301 INTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYIVTSMIAETTILW 354
>AT5G16570.1 | chr5:5421898-5424523 REVERSE LENGTH=357
Length = 356
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/355 (85%), Positives = 334/355 (94%)
Query: 1 MANLTDLVNLNLSDCSDKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSST 60
M++L DL+NL+LSD +D+IIAEYIW+GGSG+D+RSKART+ GP+TD SQLPKWNYDGSST
Sbjct: 1 MSSLADLINLDLSDSTDQIIAEYIWIGGSGLDMRSKARTLPGPVTDPSQLPKWNYDGSST 60
Query: 61 GQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRHSAAKIFSHPDVV 120
GQAPG+DSEVI+YPQAIFKDPFRRG+NILVMCD YTP GEPIPTNKRH+AAKIF P VV
Sbjct: 61 GQAPGDDSEVIIYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFEDPSVV 120
Query: 121 AEVPWYGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCAAGAEKAFGRDIVDAHYKACI 180
AE WYGIEQEYTLLQKD+ WP+GWPVGGFPGPQGPYYC GA+KAFGRDIVD+HYKAC+
Sbjct: 121 AEETWYGIEQEYTLLQKDIKWPVGWPVGGFPGPQGPYYCGVGADKAFGRDIVDSHYKACL 180
Query: 181 YAGINISGINGEVMPGQWEFQVGPSVGIAAADQVWVARYILERVTEVAGVVLSLDPKPIP 240
YAGIN+SG NGEVMPGQWEFQVGP+VGIAAADQVWVARYILER+TE+AGVVLSLDPKPIP
Sbjct: 181 YAGINVSGTNGEVMPGQWEFQVGPTVGIAAADQVWVARYILERITELAGVVLSLDPKPIP 240
Query: 241 GDWNGAGAHTNFSTKSMREPGGYEVIKKAIDKLALRHKEHIAAYGEGNERRLTGRHETAD 300
GDWNGAGAHTN+STKSMRE GGYEVIKKAI+KL LRHKEHIAAYGEGNERRLTG+HETAD
Sbjct: 241 GDWNGAGAHTNYSTKSMREDGGYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETAD 300
Query: 301 INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLLWK 355
INTF WGVANRGASIRVGRDTE+ GKGYFEDRRPASNMDPY VT MIAE+T+LWK
Sbjct: 301 INTFLWGVANRGASIRVGRDTEQAGKGYFEDRRPASNMDPYTVTSMIAESTILWK 355
>AT1G66200.3 | chr1:24655520-24657520 REVERSE LENGTH=366
Length = 365
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/363 (84%), Positives = 339/363 (93%), Gaps = 9/363 (2%)
Query: 1 MANLTDLVNLNLSDCSDKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSST 60
M+ L DLVNL++SD S+KIIAEYIWVGGSG+D+RSKART+ GP+TD S+LPKWNYDGSST
Sbjct: 1 MSLLADLVNLDISDNSEKIIAEYIWVGGSGMDMRSKARTLPGPVTDPSKLPKWNYDGSST 60
Query: 61 GQAPGEDSEVILYPQAIFKDPFRRGDNIL---------VMCDCYTPQGEPIPTNKRHSAA 111
GQAPG+DSEVILYPQAIFKDPFRRG+NIL VMCD YTP GEPIPTNKRH+AA
Sbjct: 61 GQAPGQDSEVILYPQAIFKDPFRRGNNILINVFYRFDQVMCDAYTPAGEPIPTNKRHAAA 120
Query: 112 KIFSHPDVVAEVPWYGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCAAGAEKAFGRDI 171
+IF++PDV+AEVPWYGIEQEYTLLQKDVNWPLGWP+GGFPGPQGPYYC+ GA+K+FGRDI
Sbjct: 121 EIFANPDVIAEVPWYGIEQEYTLLQKDVNWPLGWPIGGFPGPQGPYYCSIGADKSFGRDI 180
Query: 172 VDAHYKACIYAGINISGINGEVMPGQWEFQVGPSVGIAAADQVWVARYILERVTEVAGVV 231
VDAHYKA +YAGINISGINGEVMPGQWEFQVGPSVGI+AAD++W+ARYILER+TE+AGVV
Sbjct: 181 VDAHYKASLYAGINISGINGEVMPGQWEFQVGPSVGISAADEIWIARYILERITEIAGVV 240
Query: 232 LSLDPKPIPGDWNGAGAHTNFSTKSMREPGGYEVIKKAIDKLALRHKEHIAAYGEGNERR 291
+S DPKPIPGDWNGAGAHTN+STKSMRE GGYE+IKKAI+KL LRHKEHI+AYGEGNERR
Sbjct: 241 VSFDPKPIPGDWNGAGAHTNYSTKSMREEGGYEIIKKAIEKLGLRHKEHISAYGEGNERR 300
Query: 292 LTGRHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETT 351
LTG HETADINTF WGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVT MIAETT
Sbjct: 301 LTGHHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETT 360
Query: 352 LLW 354
LLW
Sbjct: 361 LLW 363
>AT3G17820.1 | chr3:6097503-6099408 FORWARD LENGTH=355
Length = 354
Score = 630 bits (1626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 292/353 (82%), Positives = 326/353 (92%)
Query: 1 MANLTDLVNLNLSDCSDKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSST 60
M+ L+DLVNLNL+D + KIIAEYIW+GGSG+D+RSKART+ GP+TD S+LPKWNYDGSST
Sbjct: 1 MSLLSDLVNLNLTDATGKIIAEYIWIGGSGMDIRSKARTLPGPVTDPSKLPKWNYDGSST 60
Query: 61 GQAPGEDSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRHSAAKIFSHPDVV 120
GQA GEDSEVILYPQAIFKDPFR+G+NILVMCD YTP G+PIPTNKRH+AAKIFSHPDV
Sbjct: 61 GQAAGEDSEVILYPQAIFKDPFRKGNNILVMCDAYTPAGDPIPTNKRHNAAKIFSHPDVA 120
Query: 121 AEVPWYGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCAAGAEKAFGRDIVDAHYKACI 180
E PWYGIEQEYTL+QKDVNWP+GWPVGG+PGPQGPYYC GA+KA GRDIVDAHYKAC+
Sbjct: 121 KEEPWYGIEQEYTLMQKDVNWPIGWPVGGYPGPQGPYYCGVGADKAIGRDIVDAHYKACL 180
Query: 181 YAGINISGINGEVMPGQWEFQVGPSVGIAAADQVWVARYILERVTEVAGVVLSLDPKPIP 240
YAGI ISGINGEVMPGQWEFQVGP GI++ DQVWVARY+LER+TE++GV++S DPKP+P
Sbjct: 181 YAGIGISGINGEVMPGQWEFQVGPVEGISSGDQVWVARYLLERITEISGVIVSFDPKPVP 240
Query: 241 GDWNGAGAHTNFSTKSMREPGGYEVIKKAIDKLALRHKEHIAAYGEGNERRLTGRHETAD 300
GDWNGAGAH N+STK+MR GG EVIKKAI KL L+HKEHIAAYGEGNERRLTG+HETAD
Sbjct: 241 GDWNGAGAHCNYSTKTMRNDGGLEVIKKAIGKLQLKHKEHIAAYGEGNERRLTGKHETAD 300
Query: 301 INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLL 353
INTF WGVANRGAS+RVGRDTEKEGKGYFEDRRPASNMDPYVVT MIAETT+L
Sbjct: 301 INTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 353
>AT5G35630.1 | chr5:13831220-13833239 FORWARD LENGTH=431
Length = 430
Score = 591 bits (1523), Expect = e-169, Method: Compositional matrix adjust.
Identities = 274/349 (78%), Positives = 309/349 (88%)
Query: 7 LVNLNLSDCSDKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSSTGQAPGE 66
L+NL+ SD+IIAEYIW+GGSGIDLRSK+RT++ P+ D S+LPKWNYDGSSTGQAPGE
Sbjct: 65 LLNLDTKPYSDRIIAEYIWIGGSGIDLRSKSRTIEKPVEDPSELPKWNYDGSSTGQAPGE 124
Query: 67 DSEVILYPQAIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRHSAAKIFSHPDVVAEVPWY 126
DSEVILYPQAIF+DPFR G+NILV+CD +TP GEPIPTNKR AA+IFS+ V EVPW+
Sbjct: 125 DSEVILYPQAIFRDPFRGGNNILVICDTWTPAGEPIPTNKRAKAAEIFSNKKVSGEVPWF 184
Query: 127 GIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCAAGAEKAFGRDIVDAHYKACIYAGINI 186
GIEQEYTLLQ++V WPLGWPVG FPGPQGPYYC GA+K +GRDI DAHYKAC+YAGINI
Sbjct: 185 GIEQEYTLLQQNVKWPLGWPVGAFPGPQGPYYCGVGADKIWGRDISDAHYKACLYAGINI 244
Query: 187 SGINGEVMPGQWEFQVGPSVGIAAADQVWVARYILERVTEVAGVVLSLDPKPIPGDWNGA 246
SG NGEVMPGQWEFQVGPSVGI A D VW ARY+LER+TE AGVVL+LDPKPI GDWNGA
Sbjct: 245 SGTNGEVMPGQWEFQVGPSVGIDAGDHVWCARYLLERITEQAGVVLTLDPKPIEGDWNGA 304
Query: 247 GAHTNFSTKSMREPGGYEVIKKAIDKLALRHKEHIAAYGEGNERRLTGRHETADINTFKW 306
G HTN+STKSMRE GG+EVIKKAI L+LRHKEHI+AYGEGNERRLTG+HETA I+ F W
Sbjct: 305 GCHTNYSTKSMREEGGFEVIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDQFSW 364
Query: 307 GVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLLWK 355
GVANRG SIRVGRDTE +GKGY EDRRPASNMDPY+VT ++AETTLLW+
Sbjct: 365 GVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYIVTSLLAETTLLWE 413
>AT1G48470.1 | chr1:17913784-17915926 FORWARD LENGTH=354
Length = 353
Score = 581 bits (1497), Expect = e-166, Method: Compositional matrix adjust.
Identities = 264/338 (78%), Positives = 307/338 (90%)
Query: 16 SDKIIAEYIWVGGSGIDLRSKARTVKGPITDVSQLPKWNYDGSSTGQAPGEDSEVILYPQ 75
+ KIIAEYIW+GGSG+D+RSKART+ GP+++ ++LPKWNYDGSST QA G+DSEVILYPQ
Sbjct: 16 TKKIIAEYIWIGGSGMDIRSKARTLPGPVSNPTKLPKWNYDGSSTDQAAGDDSEVILYPQ 75
Query: 76 AIFKDPFRRGDNILVMCDCYTPQGEPIPTNKRHSAAKIFSHPDVVAEVPWYGIEQEYTLL 135
AIFKDPFR+G+NILVMCD Y P G+PIPTN RH A KIF HP+V AE PW+GIEQEYTLL
Sbjct: 76 AIFKDPFRKGNNILVMCDAYRPAGDPIPTNNRHKAVKIFDHPNVKAEEPWFGIEQEYTLL 135
Query: 136 QKDVNWPLGWPVGGFPGPQGPYYCAAGAEKAFGRDIVDAHYKACIYAGINISGINGEVMP 195
+KDV WPLGWP+GGFPGPQGPYYCA GA+KAFGRDIVDAHYKAC+Y+G++I G NGEVMP
Sbjct: 136 KKDVKWPLGWPLGGFPGPQGPYYCAVGADKAFGRDIVDAHYKACLYSGLSIGGANGEVMP 195
Query: 196 GQWEFQVGPSVGIAAADQVWVARYILERVTEVAGVVLSLDPKPIPGDWNGAGAHTNFSTK 255
GQWEFQ+ P+VGI A DQ+WVARYILER+TE+ GV++S DPKPI GDWNGA AHTNFSTK
Sbjct: 196 GQWEFQISPTVGIGAGDQLWVARYILERITEICGVIVSFDPKPIQGDWNGAAAHTNFSTK 255
Query: 256 SMREPGGYEVIKKAIDKLALRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASI 315
SMR+ GG ++IK+AI KL ++HK+HIAAYGEGNERRLTG+HETADINTF WGVA+RGAS+
Sbjct: 256 SMRKDGGLDLIKEAIKKLEVKHKQHIAAYGEGNERRLTGKHETADINTFSWGVADRGASV 315
Query: 316 RVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLL 353
RVGRDTEKEGKGYFEDRRP+SNMDPY+VT MIAETT+L
Sbjct: 316 RVGRDTEKEGKGYFEDRRPSSNMDPYLVTSMIAETTIL 353
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.137 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,473,558
Number of extensions: 379222
Number of successful extensions: 753
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 751
Number of HSP's successfully gapped: 6
Length of query: 357
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 257
Effective length of database: 8,364,969
Effective search space: 2149797033
Effective search space used: 2149797033
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)