BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0208900 Os03g0208900|AK070806
(415 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G74910.1 | chr1:28135770-28138456 REVERSE LENGTH=416 709 0.0
AT2G04650.1 | chr2:1621986-1624486 REVERSE LENGTH=407 649 0.0
AT2G39770.1 | chr2:16589401-16590741 FORWARD LENGTH=362 190 1e-48
AT3G55590.1 | chr3:20617479-20618881 FORWARD LENGTH=365 186 2e-47
AT4G30570.1 | chr4:14930706-14931951 REVERSE LENGTH=332 174 6e-44
>AT1G74910.1 | chr1:28135770-28138456 REVERSE LENGTH=416
Length = 415
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/414 (81%), Positives = 373/414 (90%), Gaps = 1/414 (0%)
Query: 2 AASEQRVVAVIMVGGPTKGTRFRPLSLNVPKPLFPLAGQPMVHHPISACRRIPNLAQIYL 61
++ E++VVAVIMVGGPTKGTRFRPLSLN+PKPLFP+AGQPMVHHPISAC+RIPNLAQIYL
Sbjct: 3 SSMEEKVVAVIMVGGPTKGTRFRPLSLNIPKPLFPIAGQPMVHHPISACKRIPNLAQIYL 62
Query: 62 VGFYEEREFALYVSSISNELRVPVRYLREDKPHGSAGGLYSFRDYIMEDSPSHIVLLNCD 121
VGFYEEREFALYVS+ISNEL+VPVRYLREDKPHGSAGGLY FR+ IMEDSPSHI LLNCD
Sbjct: 63 VGFYEEREFALYVSAISNELKVPVRYLREDKPHGSAGGLYHFRNLIMEDSPSHIFLLNCD 122
Query: 122 VCSSFPLPDMLEAHKKYGGMGTLLVNKVSAESANQFGELVADPETNELLHYTEKPETFVS 181
VC SFPLP MLEAH+ YGG+GTLLV KVS ESA+QFGELVADP TNELLHYTEKPETFVS
Sbjct: 123 VCCSFPLPKMLEAHRGYGGIGTLLVIKVSPESASQFGELVADPVTNELLHYTEKPETFVS 182
Query: 182 DLINCGVYIFTPNIFNAIEDVLKQKKDRANLRRVSSFEALHSATKALPADYVRLDQDILS 241
D INCGVY+FTP IFNAI DV Q+KDRA L+RVSSFEAL AT+ +P D+VRLDQDILS
Sbjct: 183 DRINCGVYVFTPEIFNAIGDVSTQRKDRATLKRVSSFEALQPATR-IPTDFVRLDQDILS 241
Query: 242 PLAGKKELYTYQTLDFWEQIKTPGMSLRCSGLYLSQFRHTSPHLLASGDGKRSATIIGDV 301
PLAGKK LYTY+T+DFWEQIK+PGMSLRCSGLYLSQFR TSP LLASGDG RSA +IGDV
Sbjct: 242 PLAGKKRLYTYETMDFWEQIKSPGMSLRCSGLYLSQFRLTSPQLLASGDGTRSAIVIGDV 301
Query: 302 YIHPSAKVHPTAKIGPNVSISANARIGAGARLIHCIILDDVEIMENAVVIHSIVGWKSTV 361
YIHPSAKVHPTAKIGPNVSISANAR+G G RL+ CIILDDVEIMENAVV ++IVGWKS++
Sbjct: 302 YIHPSAKVHPTAKIGPNVSISANARVGPGVRLMSCIILDDVEIMENAVVTNAIVGWKSSI 361
Query: 362 GKWSRVQGEGDHNAKLGITILGEAXXXXXXXXXXNSIVLPNKTLNVSVQEEIIL 415
G+WSRVQ EG +N+KLG+TILG++ +SIVLPNKTLNVSVQ+EIIL
Sbjct: 362 GRWSRVQAEGVYNSKLGVTILGDSVAVEDEVVVTSSIVLPNKTLNVSVQDEIIL 415
>AT2G04650.1 | chr2:1621986-1624486 REVERSE LENGTH=407
Length = 406
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/413 (74%), Positives = 353/413 (85%), Gaps = 9/413 (2%)
Query: 4 SEQRVVAVIMVGGPTKGTRFRPLSLNVPKPLFPLAGQPMVHHPISACRRIPNLAQIYLVG 63
SE++VVAVIMVGGPTKGTRFRPLS N PKPL PLAGQPM+HHPISAC++I NLAQI+L+G
Sbjct: 2 SEEKVVAVIMVGGPTKGTRFRPLSFNTPKPLIPLAGQPMIHHPISACKKISNLAQIFLIG 61
Query: 64 FYEEREFALYVSSISNELRVPVRYLREDKPHGSAGGLYSFRDYIMEDSPSHIVLLNCDVC 123
FYEEREFALYVSSISNEL++PVRYL+EDKPHGSAG LY FRD IME+ PSH+ LLNCDVC
Sbjct: 62 FYEEREFALYVSSISNELKIPVRYLKEDKPHGSAGALYYFRDRIMEEKPSHVFLLNCDVC 121
Query: 124 SSFPLPDMLEAHKKYGGMGTLLVNKVSAESANQFGELVADPETNELLHYTEKPETFVSDL 183
SFPL +L+AH++YGG+GT+LV KVSAE+A+QFGEL+ADP+T ELLHYTEKPETFVSDL
Sbjct: 122 CSFPLQGILDAHRRYGGIGTMLVIKVSAEAASQFGELIADPDTKELLHYTEKPETFVSDL 181
Query: 184 INCGVYIFTPNIFNAIEDVLKQKKDRANLRRVSSFEALHSATKALPADYVRLDQDILSPL 243
INCGVY+FT +IFNAIE+V Q +D ++ SAT+++PAD+VRLDQDILSPL
Sbjct: 182 INCGVYVFTSDIFNAIEEVYSQIRDTSS--------NYQSATRSVPADFVRLDQDILSPL 233
Query: 244 AGKKELYTYQTLDFWEQIKTPGMSLRCSGLYLSQFRHTSPHLLASGDG-KRSATIIGDVY 302
AGKK+LYTY+ DFWEQIKTPG SL+CS LYLSQFR TSPH+LASGDG R TIIGDVY
Sbjct: 234 AGKKQLYTYENKDFWEQIKTPGKSLKCSALYLSQFRETSPHILASGDGTNRKPTIIGDVY 293
Query: 303 IHPSAKVHPTAKIGPNVSISANARIGAGARLIHCIILDDVEIMENAVVIHSIVGWKSTVG 362
IHPS K+HPTAKIGPNVSISAN R+G G RLI CIILDDVEI ENAVVI+SI+GWKS++G
Sbjct: 294 IHPSVKLHPTAKIGPNVSISANVRVGPGVRLISCIILDDVEIKENAVVINSIIGWKSSIG 353
Query: 363 KWSRVQGEGDHNAKLGITILGEAXXXXXXXXXXNSIVLPNKTLNVSVQEEIIL 415
+WSRVQ GD+N +LGITILGEA SIVL NKTLNVSVQ++IIL
Sbjct: 354 RWSRVQASGDYNDRLGITILGEAVTVEDEVAVIGSIVLQNKTLNVSVQDDIIL 406
>AT2G39770.1 | chr2:16589401-16590741 FORWARD LENGTH=362
Length = 361
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 201/407 (49%), Gaps = 49/407 (12%)
Query: 10 AVIMVGGPTKGTRFRPLSLNVPKPLFPLAGQPMVHHPISACRRIPNLAQIYLVGFYEERE 69
A+I+VGG GTR RPL+L+ PKPL A +PM+ H I A + + + ++ L Y+
Sbjct: 3 ALILVGG--FGTRLRPLTLSFPKPLVDFANKPMILHQIEALKAV-GVDEVVLAINYQPEV 59
Query: 70 FALYVSSISNELRVPVRYLREDKPHGSAGGLYSFRDYIMEDSPSHIVLLNCDVCSSFPLP 129
++ +L + + +E +P G+AG L RD +++ S +LN DV S +PL
Sbjct: 60 MLNFLKDFETKLEIKITCSQETEPLGTAGPLALARDKLLDGSGEPFFVLNSDVISEYPLK 119
Query: 130 DMLEAHKKYGGMGTLLVNKVSAESANQFGELVADPETNELLHYTEKPETFVSDLINCGVY 189
+MLE HK +GG +++V KV S ++G +V + T + + EKP+ +V + IN G+Y
Sbjct: 120 EMLEFHKSHGGEASIMVTKVDEPS--KYGVVVMEESTGRVEKFVEKPKLYVGNKINAGIY 177
Query: 190 IFTPNIFNAIEDVLKQKKDRANLRRVSSFEALHSATKALPADYVRLDQDILSPLAGKKEL 249
+ P++ + IE LR S ++++ +A + L
Sbjct: 178 LLNPSVLDKIE-----------LRPTS------------------IEKETFPKIAAAQGL 208
Query: 250 YTYQTLDFWEQIKTPGMSLRCSGLYLSQFRHTSPHLLASGDGKRSATIIGDVYIHPSAKV 309
Y FW I P + LYL R SP L SG I+G+V + +A +
Sbjct: 209 YAMVLPGFWMDIGQPRDYITGLRLYLDSLRKKSPAKLTSG-----PHIVGNVLVDETATI 263
Query: 310 HPTAKIGPNVSISANARIGAGARLIHCIILDDVEIMENAVVIHSIVGWKSTVGKWSRVQG 369
IGP+V+I + +G RL C ++ V I ++A + SI+GW STVG+W+R++
Sbjct: 264 GEGCLIGPDVAIGPGCIVESGVRLSRCTVMRGVRIKKHACISSSIIGWHSTVGQWARIE- 322
Query: 370 EGDHNAKLGITILGEAXXXXXXXXXXNSIVLPNKTLNVSV-QEEIIL 415
+TILGE +VLP+K + ++ + EI++
Sbjct: 323 --------NMTILGEDVHVSDEIYSNGGVVLPHKEIKSNILKPEIVM 361
>AT3G55590.1 | chr3:20617479-20618881 FORWARD LENGTH=365
Length = 364
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 199/404 (49%), Gaps = 53/404 (13%)
Query: 10 AVIMVGGPTKGTRFRPLSLNVPKPLFPLAGQPMVHHPISACRRIPNLAQIYLVGFYEERE 69
A+I+VGG GTR RPL+L++PKPL A +PM+ H I A + I + ++ L YE +
Sbjct: 3 ALILVGG--FGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAI-GVDEVVLAINYEPEQ 59
Query: 70 FALYVSSISNE----LRVPVRYLREDKPHGSAGGLYSFRDYIMEDSPSHIVLLNCDVCSS 125
L +S SN+ L + + +E +P G+AG L RD +++ S +LN DV S
Sbjct: 60 L-LVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISD 118
Query: 126 FPLPDMLEAHKKYGGMGTLLVNKVSAESANQFGELVADPETNELLHYTEKPETFVSDLIN 185
+PL +M+ H +GG +++V KV S ++G +V + T + + EKP+ FV + IN
Sbjct: 119 YPLEEMIAFHNAHGGEASIMVTKVDEPS--KYGVVVMEEATGRVERFVEKPKLFVGNKIN 176
Query: 186 CGVYIFTPNIFNAIEDVLKQKKDRANLRRVSSFEALHSATKALPADYVRLDQDILSPLAG 245
G+Y+ P++ DR LR S ++++I +A
Sbjct: 177 AGIYLLNPSVL-----------DRIELRPTS------------------IEKEIFPQIAE 207
Query: 246 KKELYTYQTLDFWEQIKTPGMSLRCSGLYLSQFRHTSPHLLASGDGKRSATIIGDVYIHP 305
++LY FW I P + LYL R SP LA+G I+G+V +
Sbjct: 208 AEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATG-----PHILGNVLVDE 262
Query: 306 SAKVHPTAKIGPNVSISANARIGAGARLIHCIILDDVEIMENAVVIHSIVGWKSTVGKWS 365
+A++ IGPNV+I + +G RL HC ++ V + A + SI+GW STVG+W+
Sbjct: 263 TAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWA 322
Query: 366 RVQGEGDHNAKLGITILGEAXXXXXXXXXXNSIVLPNKTLNVSV 409
RV+ ++ILG+ +VL NK + +
Sbjct: 323 RVE---------NMSILGKNVYVCDEIYCNGGVVLHNKEIKSDI 357
>AT4G30570.1 | chr4:14930706-14931951 REVERSE LENGTH=332
Length = 331
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 185/377 (49%), Gaps = 47/377 (12%)
Query: 30 VPKPLFPLAGQPMVHHPISACRRIPNLAQIYLVGFYEEREFAL-YVSSISNELRVPVRYL 88
+PKPL +PM+ H I A + + ++ L +++ E L +V +L + + +
Sbjct: 1 MPKPLVDFGNKPMILHQIEALKG-AGVTEVVLAINHQQPEVMLNFVKEYEKKLEIKITFS 59
Query: 89 REDKPHGSAGGLYSFRDYIMEDSPSHIVLLNCDVCSSFPLPDMLEAHKKYGGMGTLLVNK 148
+E +P G+AG L RD ++++S +LN DV +PL +M+E HK +++V +
Sbjct: 60 QETEPLGTAGPLALARDKLVDESGQPFFVLNSDVICEYPLLEMIEFHKTNRAEASIMVTE 119
Query: 149 VSAESANQFGELVADPETNELLHYTEKPETFVSDLINCGVYIFTPNIFNAIEDVLKQKKD 208
V + +++G +V + T + + EKP+ FV + IN G+Y+ +P++ D
Sbjct: 120 V--DDPSKYGVVVTEEGTARVESFVEKPKHFVGNKINAGIYLLSPSVL-----------D 166
Query: 209 RANLRRVSSFEALHSATKALPADYVRLDQDILSPLAGKKELYTYQTLDFWEQIKTPGMSL 268
R LRR S ++++I +A +K+LY FW I P +
Sbjct: 167 RIELRRTS------------------IEKEIFPKIASEKKLYAMVLPGFWMDIGQPKDYI 208
Query: 269 RCSGLYLSQFRHTSPHLLASGDGKRSATIIGDVYIHPSAKVHPTAKIGPNVSISANARIG 328
+YL+ R +P LA+GD IIG+V +H SA + IGP+V I I
Sbjct: 209 TGQRMYLNSLREKTPQELATGD-----NIIGNVLVHESAVIGEGCLIGPDVVIGPGCVID 263
Query: 329 AGARLIHCIILDDVEIMENAVVIHSIVGWKSTVGKWSRVQGEGDHNAKLGITILGEAXXX 388
+G RL C ++ V I E+A + +SIVGW STVG+W+RV IT+LG+
Sbjct: 264 SGVRLFGCTVMRGVWIKEHACISNSIVGWDSTVGRWARV---------FNITVLGKDVNV 314
Query: 389 XXXXXXXNSIVLPNKTL 405
+ +V+ + L
Sbjct: 315 ADAEVYNSGVVIEEQGL 331
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,969,562
Number of extensions: 386727
Number of successful extensions: 851
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 833
Number of HSP's successfully gapped: 5
Length of query: 415
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 314
Effective length of database: 8,337,553
Effective search space: 2617991642
Effective search space used: 2617991642
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)