BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0194300 Os03g0194300|J075156H17
(417 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G04850.1 | chr2:1704298-1705608 FORWARD LENGTH=405 381 e-106
AT3G25290.1 | chr3:9208955-9210353 FORWARD LENGTH=394 167 7e-42
AT5G35735.1 | chr5:13900913-13902934 REVERSE LENGTH=405 158 6e-39
AT4G12980.1 | chr4:7589670-7591074 REVERSE LENGTH=395 155 5e-38
AT5G47530.1 | chr5:19281471-19282870 FORWARD LENGTH=396 136 3e-32
AT4G17280.1 | chr4:9678887-9680277 REVERSE LENGTH=403 135 4e-32
AT3G59070.1 | chr3:21832364-21834514 REVERSE LENGTH=467 127 1e-29
AT5G48750.1 | chr5:19770052-19770819 REVERSE LENGTH=256 93 2e-19
AT3G07570.1 | chr3:2418205-2420206 REVERSE LENGTH=370 89 6e-18
AT3G61750.1 | chr3:22857897-22859254 REVERSE LENGTH=399 80 1e-15
AT3G07390.1 | chr3:2365452-2366273 FORWARD LENGTH=274 49 7e-06
>AT2G04850.1 | chr2:1704298-1705608 FORWARD LENGTH=405
Length = 404
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/365 (53%), Positives = 247/365 (67%), Gaps = 4/365 (1%)
Query: 40 RCTTSTPLKTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPA 99
CTT+T K++ KCI+LPTQ A++AWTY NATLD F G+FISPSGWV WG+N D+PA
Sbjct: 24 HCTTTTATKSFEKCISLPTQQASIAWTYHPHNATLDLCFFGTFISPSGWVGWGINPDSPA 83
Query: 100 -MTGARVLAAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPAR-- 156
MTG+RVL AF DP++G L+ LP++L VKLQ PL+SRPLD+ L+SS++ + +
Sbjct: 84 QMTGSRVLIAFPDPNSGQLILLPYVLDSSVKLQKGPLLSRPLDLVRLSSSSASLYGGKMA 143
Query: 157 TVRDGATVTIAATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILX-X 215
T+R+GA+V I A+++LS N TK+H VWNRGLYVQGYSPTIHPT ++DL+S +T D+
Sbjct: 144 TIRNGASVQIYASVKLSSNNTKIHHVWNRGLYVQGYSPTIHPTTSTDLSSFSTFDVTSGF 203
Query: 216 XXXXXXXXXXXLQWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXX 275
L+ THG +NA+SWGFLLP GA ARYLR S GP WFY HAAIQ
Sbjct: 204 ATVNQNSGSRALKVTHGVVNAISWGFLLPAGAVTARYLRQMQSIGPTWFYIHAAIQLTGF 263
Query: 276 XXXXXXXXXXXXXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSY 335
SPGVTY LHR LGIA TA +LQTLA+LFRPKTTN++R+YWKSY
Sbjct: 264 LLGTIGFSIGIVLGHNSPGVTYGLHRSLGIATFTAAALQTLALLFRPKTTNKFRRYWKSY 323
Query: 336 HHLXXXXXXXXXXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEVNAWVVFCRRQ 395
HH + G SY KLGYC+ L+TL G CVA+EVN+WVVFCR+
Sbjct: 324 HHFVGYACVVMGVVNVFQGFEVLREGRSYAKLGYCLCLSTLVGVCVAMEVNSWVVFCRKA 383
Query: 396 QEEKL 400
+EEK+
Sbjct: 384 KEEKM 388
>AT3G25290.1 | chr3:9208955-9210353 FORWARD LENGTH=394
Length = 393
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 162/371 (43%), Gaps = 21/371 (5%)
Query: 40 RCTTSTPLKTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPA 99
+ T + KTY C+ LP A L ++YDA N TL F+ P GW+AW +N A
Sbjct: 29 KSQTFSGDKTYPHCLDLPQLKAFLHYSYDASNTTLAVVFSAPPAKPGGWIAWAINPKATG 88
Query: 100 MTGARVLAAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVR 159
M G++ L A+ DP G + +S L S L D+ R
Sbjct: 89 MVGSQTLVAYKDPGNGVAVVKTLNISSYSSLIPSKLAFDVWDM----------KAEEAAR 138
Query: 160 DGATVTIAATIRLSPN---RTKLHFVWNRGLYVQ-GYSPTIHPTDASDLASHATVDILXX 215
DG ++ I A +++ + + K++ VW G + G H D+++LAS +++D+
Sbjct: 139 DGGSLRIFARVKVPADLVAKGKVNQVWQVGPELGPGGMIGRHAFDSANLASMSSLDLKGD 198
Query: 216 XXXXXXXXXXXL------QWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAA 269
+ + HG LNA+SWG L P+GA +ARY+R S PAWFY H +
Sbjct: 199 NSGGTISGGDEVNAKIKNRNIHGILNAVSWGILFPIGAIIARYMRVFDSADPAWFYLHVS 258
Query: 270 IQXXXXXXXXXXXXXXXXXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYR 329
Q + S G+ + HR +GIA T ++Q AML RPK ++YR
Sbjct: 259 CQFSAYVIGVAGWATGLKLGNESEGIRFSAHRNIGIALFTLATIQMFAMLLRPKKDHKYR 318
Query: 330 KYWKSYHHLXXXXXXXXXXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEVNAWV 389
YW YHH + +Y K Y +A L G + LE WV
Sbjct: 319 FYWNIYHHGVGYAILTLGIINVFKGLNILKPQDTY-KTAYIAVIAVLGGIALLLEAITWV 377
Query: 390 VFCRRQQEEKL 400
V +R+ +
Sbjct: 378 VVLKRKSNNSM 388
>AT5G35735.1 | chr5:13900913-13902934 REVERSE LENGTH=405
Length = 404
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 149/351 (42%), Gaps = 19/351 (5%)
Query: 50 YAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTGARVLAAF 109
+A C L G+ L WTY+ +N T+ A+ S S WVAWG+N + M G + L AF
Sbjct: 40 FADCSDLSALGSFLHWTYNEQNGTVSIAYRHPGTSASSWVAWGLNPSSTQMVGTQALVAF 99
Query: 110 SDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTIAAT 169
++ +T A + V + L L + SA+LV VTI AT
Sbjct: 100 TNTTTNQFQAY----TSSVSSYGTRLERSSLSFGVSGLSATLVS--------GEVTIFAT 147
Query: 170 IRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDI---LXXXXXXXXXXXXX 226
+ LSPN + +W G V G P H T ++ S +D
Sbjct: 148 LELSPNLITANQLWQVGPVVNGV-PASHQTSGDNMRSSGRIDFRTGQASAGGGGSGDRLR 206
Query: 227 LQWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXXXXXX 286
+ THG LNA+SWG L+P+GA +ARY++ A P WFY H A Q
Sbjct: 207 KRNTHGVLNAVSWGVLMPMGAMMARYMKVFAD--PTWFYLHIAFQVSGYVIGVAGWATGI 264
Query: 287 XXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLXXXXXXXX 346
+ SPG +Y HR LGIA T +LQ A+L RPK ++YR YW YHH
Sbjct: 265 KLGNDSPGTSYSTHRNLGIALFTFATLQVFALLVRPKPDHKYRTYWNVYHHTVGYTTIIL 324
Query: 347 XXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEVNAWVVFCRRQQE 397
+ W+ Y L L + LE W + RR+
Sbjct: 325 SIVNIFKGFDILD-PEDKWRWAYIGILIFLGACVLILEPLTWFIVLRRKSR 374
>AT4G12980.1 | chr4:7589670-7591074 REVERSE LENGTH=395
Length = 394
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 150/366 (40%), Gaps = 21/366 (5%)
Query: 43 TSTPLKTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTG 102
T + +K+Y C+ LP A L ++YDA N TL F+ P GW+AW +N + M G
Sbjct: 33 TFSGVKSYPHCLDLPDLKAILHYSYDASNTTLAVVFSAPPSKPGGWIAWAINPKSTGMAG 92
Query: 103 ARVLAAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGA 162
++ L A DPSTG + L S L D V DG
Sbjct: 93 SQALVASKDPSTGVASVTTLNIVSYSSLVPSKLSFDVWD----------VKAEEAANDGG 142
Query: 163 TVTIAATIRLSPN---RTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILXXXXXX 219
+ I A +++ + K++ VW G V H +L S ++D+
Sbjct: 143 ALRIFAKVKVPADLAASGKVNQVWQVGPGVSNGRIQAHDFSGPNLNSVGSLDLTGTTPGV 202
Query: 220 XXXXXXXL-------QWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQX 272
+ HG LNA+SWG L P+GA +ARY+R S PAWFY H + Q
Sbjct: 203 PVSGGGGAGNSRIHKRNIHGILNAVSWGLLFPIGAMIARYMRIFESADPAWFYLHVSCQF 262
Query: 273 XXXXXXXXXXXXXXXXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYW 332
S S G+ Y HR +GI + +LQ AML RP+ +++R W
Sbjct: 263 SAYVIGVAGWATGLKLGSESKGIQYNTHRNIGICLFSIATLQMFAMLLRPRKDHKFRFVW 322
Query: 333 KSYHHLXXXXXXXXXXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEVNAWVVFC 392
YHH + +Y K Y + TL G + LEV WV+
Sbjct: 323 NIYHHGVGYSILILGIINVFKGLSILNPKHTY-KTAYIAVIGTLGGITLLLEVVTWVIVL 381
Query: 393 RRQQEE 398
+R+ +
Sbjct: 382 KRKSAK 387
>AT5G47530.1 | chr5:19281471-19282870 FORWARD LENGTH=396
Length = 395
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 147/356 (41%), Gaps = 19/356 (5%)
Query: 48 KTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTGARVLA 107
+ + C LP + L +TYD+ + L A+ + ++P WVAW VN + M GA+ +
Sbjct: 36 RLFESCNDLPVLDSFLHYTYDSSSGNLQIAYRHTKLTPGKWVAWAVNPTSTGMVGAQAIV 95
Query: 108 AFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTIA 167
A+ S G V+ SP+ S + S ++ + T ++ V A
Sbjct: 96 AYPQ-SDGT-----------VRAYTSPISSYQTSLLEAELSFNVSQLSATYQNNEMVIYA 143
Query: 168 ATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILXXXXXXXXX----- 222
N ++ VW G + G +P HPT +++ S +T++++
Sbjct: 144 ILNLPLANGGIINTVWQDG-SLSGNNPLPHPTSGNNVRSVSTLNLVSGASGSTSTGAGGA 202
Query: 223 XXXXLQWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXX 282
+ HG LN +SWG ++P+GA +ARYL+ S PAWFY H Q
Sbjct: 203 SKLRKRNIHGILNGVSWGIMMPIGAIIARYLKVSKSADPAWFYLHVFCQSSAYIIGVAGW 262
Query: 283 XXXXXXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLXXXX 342
+ S G+ + HR +GIA ++Q AM RPK ++YR YW YHH
Sbjct: 263 ATGLKLGNESAGIQFTFHRAVGIALFCLATIQVFAMFLRPKPEHKYRVYWNIYHHTVGYS 322
Query: 343 XXXXXXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEVNAWVVFCRRQQEE 398
+ W+ Y + L V LE W V +R + E
Sbjct: 323 VIILAVVNVFKGLDILS-PEKQWRNAYTAIIVVLGIVAVVLEGFTWYVVIKRGKAE 377
>AT4G17280.1 | chr4:9678887-9680277 REVERSE LENGTH=403
Length = 402
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 151/363 (41%), Gaps = 32/363 (8%)
Query: 48 KTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTGARVLA 107
+ C LP + L +TY++ +L A+ + ++ WVAW VN + M GA+ +
Sbjct: 43 NVFDSCNDLPFLDSFLHYTYESSTGSLHIAYRHTKLTSGKWVAWAVNPTSTGMVGAQAIV 102
Query: 108 AFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASL-VDPARTVRDGATVTI 166
A+ P + V++ SP+ R LL S V + +
Sbjct: 103 AY--PQSDG----------TVRVYTSPI--RSYQTSLLEGDLSFNVSGLSATYQNNEIVV 148
Query: 167 AATIRLSP---NRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILXXXXXXXXXX 223
A+++L+ N ++ VW G + G S HPT +++ S +T++++
Sbjct: 149 LASLKLAQDLGNGGTINTVWQDG-SMSGNSLLPHPTSGNNVRSVSTLNLVSGVSAAAGGA 207
Query: 224 XXXLQW----THGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXX 279
+ HG LN +SWG ++P+GA +ARYLR S PAWFY H Q
Sbjct: 208 GGSSKLRKRNIHGILNGVSWGIMMPLGAIIARYLRVAKSADPAWFYIHVFCQASAYIIGV 267
Query: 280 XXXXXXXXXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLX 339
SPG+ Y HR +GIA + ++Q AM RPK +++R YW YHH
Sbjct: 268 AGWATGLKLGGDSPGIQYSTHRAIGIALFSLATVQVFAMFLRPKPEHKHRLYWNIYHH-- 325
Query: 340 XXXXXXXXXXXXXXXXXXMGLG----ASYWKLGYCMALATLAGGCVALEVNAWVVFCRRQ 395
GLG WK Y + LA LE W V +R+
Sbjct: 326 ---TIGYTIIILGVVNVFKGLGILSPKKQWKNAYIGIIVVLAIVATLLEAFTWYVVIKRR 382
Query: 396 QEE 398
+ E
Sbjct: 383 KLE 385
>AT3G59070.1 | chr3:21832364-21834514 REVERSE LENGTH=467
Length = 466
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 141/342 (41%), Gaps = 18/342 (5%)
Query: 48 KTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTGARVLA 107
K++ C L + L + Y L+ A+ S + S W++W +N + M GA+ L
Sbjct: 46 KSFRSCTDLLVLNSYLHFNYAQETGVLEIAYHHSNLESSSWISWAINPTSKGMVGAQALV 105
Query: 108 AFSDPSTGALLAL-PFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTI 166
A+ + ++G + A + S LQ SPL R + S+ ++ I
Sbjct: 106 AYRNSTSGVMRAYTSSINSYSPMLQESPLSLRVTQVSAEYSNGEMM-------------I 152
Query: 167 AATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILXXXXXXXXXXXXX 226
AT+ L PN T ++ +W G +G +H +L S A++D+L
Sbjct: 153 FATLVLPPNTTVVNHLWQDGPLKEGDRLGMHAMSGDNLKSMASLDLLSGQVTTTKSVNRN 212
Query: 227 L---QWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXXX 283
+ + H +NALSWG L+P+G ARY++ P WFY H Q
Sbjct: 213 MLLVKQIHAIVNALSWGILMPIGVMAARYMKNYEVLDPTWFYIHVVCQTTGYFSGLIGGL 272
Query: 284 XXXXXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLXXXXX 343
+ G+ LH +G+ G LQ L++ RP ++YRKYW YHH
Sbjct: 273 GTAIYMARHTGMRTTLHTVIGLLLFALGFLQILSLKARPNKDHKYRKYWNWYHHTMGYIV 332
Query: 344 XXXXXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEV 385
+ G S WK+ Y + +A V +E+
Sbjct: 333 IVLSIYNIYKGLSILQPG-SIWKIAYTTIICCIAAFAVVMEI 373
>AT5G48750.1 | chr5:19770052-19770819 REVERSE LENGTH=256
Length = 255
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 15/221 (6%)
Query: 48 KTYAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPSGWVAWGVNKDAPAMTGARVLA 107
K + C+ LP + L ++Y L+ A+ + I S W+AWG+N + M GA+ L
Sbjct: 43 KHFRSCVDLPVLDSFLHYSYVRETGVLEVAYRHTNIESSSWIAWGINPTSKGMIGAQTLL 102
Query: 108 AFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDIPLLASSASLVDPARTVRDGATVTIA 167
A+ + ++G + A + + L PL + SA ++ +TI
Sbjct: 103 AYRNSTSGFMRA----YTSSINGYTPMLQEGPLSFRVTQLSAEYLNRE--------MTIF 150
Query: 168 ATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASHATVDILXXXXXXXXXXXXXL 227
AT+ N T ++ +W G +G +H + L S A +D+L +
Sbjct: 151 ATMVWPSNTTVVNHLWQDGPLKEGDRLGMHAMSGNHLKSMANLDLLSGQVMTTKAANDNM 210
Query: 228 ---QWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFY 265
+ HG +NA+ WG +P+G ARY+R P WFY
Sbjct: 211 LLVKSIHGLVNAVCWGIFIPIGVMAARYMRTYKGLDPTWFY 251
>AT3G07570.1 | chr3:2418205-2420206 REVERSE LENGTH=370
Length = 369
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
Query: 227 LQWTHGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXXXXXX 286
L+ THG +N WG L+ VGA VAR+++ P WFYAH A+Q
Sbjct: 209 LKKTHGLMNMFGWGILIIVGAIVARHMKQW---DPTWFYAHIALQTTGFLLGLTGVICGL 265
Query: 287 XXXSASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLXXXXXXXX 346
+ H+GLGI G LQ LA+L RP ++YRKYW YHH
Sbjct: 266 VLENRLKANNVSKHKGLGITILVMGVLQMLALLARPDKQSKYRKYWNWYHHNIGRLLIIL 325
Query: 347 XXXXXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEVNAWV 389
G S W GY A+A LA + LEV ++
Sbjct: 326 AISNIFYGIHLAKAGTS-WNGGYGFAVAVLALTAIGLEVRKFL 367
>AT3G61750.1 | chr3:22857897-22859254 REVERSE LENGTH=399
Length = 398
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 62/156 (39%), Gaps = 6/156 (3%)
Query: 231 HGSLNALSWGFLLPVGAAVARYLRPCASTGPAWFYAHAAIQXXXXXXXXXXXXXXXXXXS 290
HG + L WGFLLPVGA +ARYLR P W+Y H Q +
Sbjct: 220 HGVMAILGWGFLLPVGAILARYLR---HKDPLWYYLHIGFQFTGFIFGLAAVILGIQLYN 276
Query: 291 -ASPGVTYKLHRGLGIAAATAGSLQTLAMLFRPKTTNRYRKYWKSYHHLXXXXXXXXXXX 349
P + HRG+GI +LQ LA RP+ + R+YW YHH
Sbjct: 277 RIQPDI--PAHRGIGIFLLVLSTLQVLAFFARPQKETKMRRYWNWYHHWIGRISLFFGAV 334
Query: 350 XXXXXXXXMGLGASYWKLGYCMALATLAGGCVALEV 385
G WK+GY L+ V LE+
Sbjct: 335 NIVLGIRMADNGGDGWKIGYGFVLSVTLLAFVVLEI 370
>AT3G07390.1 | chr3:2365452-2366273 FORWARD LENGTH=274
Length = 273
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 21/163 (12%)
Query: 50 YAKCIALPTQGATLAWTYDARNATLDAAFTGSFISPS----GWVAWGVNKDAPAMTGARV 105
+ C LP + L +TY++ N++L AF + PS GWVAW +N M G++
Sbjct: 61 FDSCEDLPVLNSYLHYTYNSSNSSLSVAFVAT---PSQANGGWVAWAINPTGTKMAGSQA 117
Query: 106 LAAFSDPSTGALLALPFLLSPDVKLQASPLVSRPLDI-PLLASSASLVDPARTVRDGATV 164
A+ A + + +S L L D L A S S G +
Sbjct: 118 FLAYRSGGGAAPVVKTYNISSYSSLVEGKLA---FDFWNLRAESLS----------GGRI 164
Query: 165 TIAATIRLSPNRTKLHFVWNRGLYVQGYSPTIHPTDASDLASH 207
I T+++ ++ VW G V P +HP +L SH
Sbjct: 165 AIFTTVKVPAGADSVNQVWQIGGNVTNGRPGVHPFGPDNLGSH 207
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.132 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,690,780
Number of extensions: 221243
Number of successful extensions: 445
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 415
Number of HSP's successfully gapped: 11
Length of query: 417
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 316
Effective length of database: 8,337,553
Effective search space: 2634666748
Effective search space used: 2634666748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)