BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0192500 Os03g0192500|AK068957
         (569 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33500.1  | chr4:16112835-16116243 REVERSE LENGTH=725          263   3e-70
AT5G66720.1  | chr5:26639015-26640545 REVERSE LENGTH=415          188   7e-48
AT4G16580.1  | chr4:9341152-9342555 REVERSE LENGTH=468            171   1e-42
AT2G30170.1  | chr2:12879802-12881474 REVERSE LENGTH=299          117   2e-26

>AT4G33500.1 | chr4:16112835-16116243 REVERSE LENGTH=725
          Length = 724

 Score =  263 bits (671), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 147/340 (43%), Positives = 204/340 (60%), Gaps = 20/340 (5%)

Query: 222 DGMETALEPCVASVGSITQVEEGVDRMETSLDDSEASDG----STTQDFDTDVETESSGS 277
           + MET +EP        + V+E  +++     D E +DG    STT+D  T  +T +   
Sbjct: 385 NPMETFVEPEAVH----SSVDESTEKLVVVTSDVE-NDGENVASTTEDEITVRDTITDSG 439

Query: 278 SIEEQD--MGYGVHIPHTEQAICEVARGNKSSEVKSSDRMSSVTLPTLILASGAAMLPHP 335
           SI   D      + +P  E A  E         +K++     +      L SG A L  P
Sbjct: 440 SISNNDDTKVEDLQLPVPETASLE--------PIKAASGREELVSKAFYLDSGFASLQSP 491

Query: 336 SKVLTGGEDAYFIACDGWFGVADGVGQWSFEGINAGLYARELMDGCKKAVMESQGAPEMR 395
            K L G EDAYFI+   W G+ADGV QWSFEGIN G+YA+ELM  C+K ++ ++ A    
Sbjct: 492 FKALAGREDAYFISHHNWIGIADGVSQWSFEGINKGMYAQELMSNCEK-IISNETAKISD 550

Query: 396 TEEVLAKAADEARSPGSSTVLVAHFDGQVLHACNIGDSGFLVIRNGEIYQKSKPMTYGFN 455
             +VL ++ +E +S GSST L+AH D   LH  NIGDSGF+VIR+G + Q S PM + F 
Sbjct: 551 PVQVLHRSVNETKSSGSSTALIAHLDNNELHIANIGDSGFMVIRDGTVLQNSSPMFHHFC 610

Query: 456 FPLQIEKGDDPFKLVQKYTIDLQEGDAIVTATDGLFDNVYEEEIAAVISKSLEAGLKPSE 515
           FPL I +G D  KL + Y ++L+EGD ++ ATDGLFDN+YE+EI +++  SL+  L+P +
Sbjct: 611 FPLHITQGCDVLKLAEVYHVNLEEGDVVIAATDGLFDNLYEKEIVSIVCGSLKQSLEPQK 670

Query: 516 IAEFLVARAKEVGRSATCRSPFSDAALAVGYLGYSGGKLD 555
           IAE + A+A+EVGRS T R+PF+DAA   GY G+ GGKLD
Sbjct: 671 IAELVAAKAQEVGRSKTERTPFADAAKEEGYNGHKGGKLD 710



>AT5G66720.1 | chr5:26639015-26640545 REVERSE LENGTH=415
          Length = 414

 Score =  188 bits (477), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/245 (44%), Positives = 144/245 (58%), Gaps = 6/245 (2%)

Query: 316 SSVTLPTLILASGAAMLPHPSKVLTGGEDAYFIACD--GWFGVADGVGQWSFEGINAGLY 373
           ++ +L +L L SG+  LPHP K  TGGEDA+FI CD     GVADGVG W+  G+NAGL+
Sbjct: 161 TTTSLKSLRLVSGSCYLPHPEKEATGGEDAHFI-CDEEQAIGVADGVGGWAEVGVNAGLF 219

Query: 374 ARELMDGCKKAVMESQGAPEMRTEEVLAKAADEARSPGSSTVLVAHFDGQVLHACNIGDS 433
           +RELM     A+ E      +    VL KA  + ++ GSST  +     + LHA N+GDS
Sbjct: 220 SRELMSYSVSAIQEQHKGSSIDPLVVLEKAHSQTKAKGSSTACIIVLKDKGLHAINLGDS 279

Query: 434 GFLVIRNGEIYQKSKPMTYGFNFPLQIEKGD--DPFKLVQKYTIDLQEGDAIVTATDGLF 491
           GF V+R G    +S    +GFNF  Q+E G+  D     Q +TID+Q GD IV  TDG++
Sbjct: 280 GFTVVREGTTVFQSPVQQHGFNFTYQLESGNSADVPSSGQVFTIDVQSGDVIVAGTDGVY 339

Query: 492 DNVYEEEIAAVISKSLEAGLKPSEIAEFLVARAKEVGRSATCRSPFSDAALAVGYLGYSG 551
           DN+Y EEI  V+  S+ AGL P   A+ +   A++       +SPF+ AA   GY  Y G
Sbjct: 340 DNLYNEEITGVVVSSVRAGLDPKGTAQKIAELARQRAVDKKRQSPFATAAQEAGYR-YYG 398

Query: 552 GKLDD 556
           GKLDD
Sbjct: 399 GKLDD 403



>AT4G16580.1 | chr4:9341152-9342555 REVERSE LENGTH=468
          Length = 467

 Score =  171 bits (433), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/239 (43%), Positives = 139/239 (58%), Gaps = 9/239 (3%)

Query: 323 LILASGAAMLPHPSKVLTGGEDAYFI-ACDGWFGVADGVGQWSFEGINAGLYARELMDGC 381
           L L SG+  LPHP K  TGGEDA+FI A +   GVADGVG W+  GI+AG Y+RELM   
Sbjct: 216 LKLVSGSCYLPHPDKEATGGEDAHFICAEEQALGVADGVGGWAELGIDAGYYSRELMSNS 275

Query: 382 KKAVM-ESQGAPEMRTEEVLAKAADEARSPGSSTVLVAHFDGQVLHACNIGDSGFLVIRN 440
             A+  E +G+  +    VL KA    +S GSST  +     Q LHA N+GDSGF+V+R 
Sbjct: 276 VNAIQDEPKGS--IDPARVLEKAHTCTKSQGSSTACIIALTNQGLHAINLGDSGFMVVRE 333

Query: 441 GEIYQKSKPMTYGFNFPLQIE---KGDDPFKLVQKYTIDLQEGDAIVTATDGLFDNVYEE 497
           G    +S    + FNF  Q+E    GD P    Q +T+ +  GD I+  TDGLFDN+Y  
Sbjct: 334 GHTVFRSPVQQHDFNFTYQLESGRNGDLP-SSGQVFTVAVAPGDVIIAGTDGLFDNLYNN 392

Query: 498 EIAAVISKSLEAGLKPSEIAEFLVARAKEVGRSATCRSPFSDAALAVGYLGYSGGKLDD 556
           EI A++  ++ A + P   A+ + A A++  +    ++PFS AA   G+  Y GGKLDD
Sbjct: 393 EITAIVVHAVRANIDPQVTAQKIAALARQRAQDKNRQTPFSTAAQDAGFR-YYGGKLDD 450



>AT2G30170.1 | chr2:12879802-12881474 REVERSE LENGTH=299
          Length = 298

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 135/253 (53%), Gaps = 25/253 (9%)

Query: 321 PTLILASGAAMLPHPSKVLTGGEDAYFIACD--GWFGVADGVGQWSFEGINAGLYARELM 378
           P L L+ G   +PHP KV  GGEDA+F++    G   VADGV  W+ + ++  L+++ELM
Sbjct: 43  PELSLSVGIHAIPHPDKVEKGGEDAFFVSSYRGGVMAVADGVSGWAEQDVDPSLFSKELM 102

Query: 379 DGCKKAVMESQGAPEMRTEE--VLAKAADEARSPGSSTVLVAHFDGQ-VLHACNIGDSGF 435
               + V +     E+R +   ++ KA     S GS+T+++A  +   +L   N+GD G 
Sbjct: 103 ANASRLVDDQ----EVRYDPGFLIDKAHTATTSRGSATIILAMLEEVGILKIGNVGDCGL 158

Query: 436 LVIRNGEIYQKSKPMTYGFNFPLQIE-KGDDPFKLVQKYTI-DLQEGDAIVTATDGLFDN 493
            ++R G+I   + P  + F+ P Q+  +G     L   ++I ++Q+GD IV  +DGLFDN
Sbjct: 159 KLLREGQIIFATAPQEHYFDCPYQLSSEGSAQTYLDASFSIVEVQKGDVIVMGSDGLFDN 218

Query: 494 VYEEEIAAVISKSLEAGLKPSEIAEFLVARAKEVGRSATCRSPFSDAALAVGY------- 546
           V++ EI ++++K  +     +E +  L   A    R     SP++  A A G+       
Sbjct: 219 VFDHEIVSIVTKHTDV----AESSRLLAEVASSHSRDTEFESPYALEARAKGFDVPLWKK 274

Query: 547 -LG--YSGGKLDD 556
            LG   +GGKLDD
Sbjct: 275 VLGKKLTGGKLDD 287



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.311    0.131    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,332,211
Number of extensions: 473040
Number of successful extensions: 1157
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1149
Number of HSP's successfully gapped: 4
Length of query: 569
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 465
Effective length of database: 8,255,305
Effective search space: 3838716825
Effective search space used: 3838716825
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 114 (48.5 bits)