BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0187600 Os03g0187600|AK068057
(264 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G28200.1 | chr1:9850395-9852300 REVERSE LENGTH=260 293 8e-80
AT2G22475.1 | chr2:9541523-9544778 FORWARD LENGTH=300 284 4e-77
AT4G40100.1 | chr4:18583244-18584524 FORWARD LENGTH=226 198 2e-51
AT5G13200.1 | chr5:4207081-4208079 FORWARD LENGTH=273 175 2e-44
AT4G01600.1 | chr4:693210-694319 FORWARD LENGTH=234 172 2e-43
AT5G23350.1 | chr5:7858545-7859387 REVERSE LENGTH=281 130 8e-31
AT5G23360.1 | chr5:7861817-7862449 FORWARD LENGTH=211 129 1e-30
AT5G23370.1 | chr5:7863542-7864201 REVERSE LENGTH=220 129 2e-30
AT5G08350.1 | chr5:2686417-2687175 REVERSE LENGTH=223 125 2e-29
>AT1G28200.1 | chr1:9850395-9852300 REVERSE LENGTH=260
Length = 259
Score = 293 bits (749), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 162/196 (82%), Gaps = 5/196 (2%)
Query: 62 NPYVSSPAGGVAPASKNTMDTVKDVLGKMGKRFGEAARKTETLTGNFWQHLKTGPSITDA 121
NPYVS +PA +NTMD+VKD LGK GK +A +K E L GNFWQHLKTGPS+ DA
Sbjct: 65 NPYVSP-----SPAPRNTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADA 119
Query: 122 AMGRVSQITKVIAEGGYDKIFHQTFDVLPDEKLKKPYACYLSTSAGPVMGVLYLSNKKLA 181
A+ R++Q TK++AEGGY+K+F QTFD LPDEKL K YACYLSTSAGPV+GV+YLS KLA
Sbjct: 120 AVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLA 179
Query: 182 FCSDNPLAYKVGDKDEWSYYKVVIPHTQLRSVNPSTSRTNASEKYIQVVSVDNHEFWFMG 241
F SDNPL+YK G++ WSYYKVV+P QL++VNPSTSR N S+KYIQV+S+DNHEFWFMG
Sbjct: 180 FSSDNPLSYKEGEQTLWSYYKVVLPANQLKAVNPSTSRVNTSDKYIQVISIDNHEFWFMG 239
Query: 242 FVYYDSAVKNLQEALQ 257
FV Y+SAVK+LQEA+Q
Sbjct: 240 FVTYESAVKSLQEAVQ 255
>AT2G22475.1 | chr2:9541523-9544778 FORWARD LENGTH=300
Length = 299
Score = 284 bits (726), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 135/204 (66%), Positives = 165/204 (80%), Gaps = 2/204 (0%)
Query: 62 NPYVS-SPAGGVAPASKNTMDTVKDVLGKMGKRFGEAARKTETLTGNFWQHLKTGPSITD 120
NPY++ SPA + K+TM+TVK VLG+ GKR EAA+KTE+L GN WQHL+T PS D
Sbjct: 96 NPYIARSPAETSDASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFAD 155
Query: 121 AAMGRVSQITKVIAEGGYDKIFHQTFDVLPDEKLKKPYACYLSTSAGPVMGVLYLSNKKL 180
AAMGR++Q TKV AEGGY+KIF QTF+ P+E+L +ACYLSTSAGPVMGVLY+S+ KL
Sbjct: 156 AAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKL 215
Query: 181 AFCSDNPLAYKVGDKDEWSYYKVVIPHTQLRSVNPSTSRTNASEKYIQVVSVDNHEFWFM 240
A+CSDNPL+YK GD+ EWSYYKVVIP QL++VNPS S N +EKYIQV+SVDNHEFWFM
Sbjct: 216 AYCSDNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNHEFWFM 275
Query: 241 GFVYYDSAVKNLQEALQEAQNLRA 264
GF+ YD AV +LQ++LQ A LR+
Sbjct: 276 GFLNYDGAVTSLQDSLQ-AGALRS 298
>AT4G40100.1 | chr4:18583244-18584524 FORWARD LENGTH=226
Length = 225
Score = 198 bits (504), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 129/197 (65%), Gaps = 35/197 (17%)
Query: 62 NPYVSSPAGGVAPAS-KNTMDTVKDVLGKMGKRFGEAARKTETLTGNFWQHLKTGPSITD 120
NPYV+ + AS K TM++VK VLG+ G+R GEAA K E+L GN WQH
Sbjct: 55 NPYVARAPTETSDASLKETMESVKGVLGRWGRRVGEAAMKAESLAGNTWQH------PLR 108
Query: 121 AAMGRVSQITKVIAEGGYDKIFHQTFDVLPDEKLKKPYACYLSTSAGPVMGVLYLSNKKL 180
AAMGR++Q TKV+AEGGY+KIF QTF+ +P+E+L+ +ACYLSTSAGPVMGVLY
Sbjct: 109 AAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLY------ 162
Query: 181 AFCSDNPLAYKVGDKDEWSYYKVVIPHTQLRSVNPSTSRTNASEKYIQVVSVDNHEFWFM 240
VVIP QL+SVNPS S N +EKYIQV+SVD+HEFWFM
Sbjct: 163 ----------------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFM 200
Query: 241 GFVYYDSAVKNLQEALQ 257
GF+ Y+ AV +LQ+ LQ
Sbjct: 201 GFLNYEGAVTSLQDTLQ 217
>AT5G13200.1 | chr5:4207081-4208079 FORWARD LENGTH=273
Length = 272
Score = 175 bits (444), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 116/180 (64%), Gaps = 1/180 (0%)
Query: 82 TVKDVLGKMGKRFGEAARKTETLTGNFWQHLKTGPSITDAAMGRVSQITKVIAEGGYDKI 141
T + L + F +RK ET+ N W +LKTGPS+++ A G+V+ K I +GG++ +
Sbjct: 85 TTNNPLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESL 144
Query: 142 FHQTFDVLPDEKLKKPYACYLSTSAGPVMGVLYLSNKKLAFCSDNPLAYKV-GDKDEWSY 200
F Q F P+E LKK +ACYLST+ GPV G +YLSN ++AFCSD PL + ++ WSY
Sbjct: 145 FRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSY 204
Query: 201 YKVVIPHTQLRSVNPSTSRTNASEKYIQVVSVDNHEFWFMGFVYYDSAVKNLQEALQEAQ 260
Y+VV+P + +VNP + EKYIQ+ +VD H+FWFMGFV Y+ A +L ++ + Q
Sbjct: 205 YRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVSDFQ 264
>AT4G01600.1 | chr4:693210-694319 FORWARD LENGTH=234
Length = 233
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 128/203 (63%), Gaps = 7/203 (3%)
Query: 62 NPYV--SSPAGGVAPASKNTMDTVKDVLGKMGKRFGEAARKTETLTGNFWQHLKTGPSIT 119
NPYV +SP + + K + D V +VL + GK+ +A RK E L G HLK PSI+
Sbjct: 29 NPYVHITSP---TSASDKRSKDKVLEVLNRCGKKVEDATRKAEALVGGLKDHLKFSPSIS 85
Query: 120 DAAMGRVSQITKVIAEGGYDKIFHQTFDVLPDEKLKKPYACYLSTSAGPVMGVLYLSNKK 179
DAAM R+SQ TK+I EGG +++F + F VL EKL + CY+ST++GPV GV+Y+SN++
Sbjct: 86 DAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRR 145
Query: 180 LAFCSDNP--LAYKVGDKDEWSYYKVVIPHTQLRSVNPSTSRTNASEKYIQVVSVDNHEF 237
+AFCSD L G +YYKVV+ ++ S++ ST+ SE+Y+ +V+ D EF
Sbjct: 146 IAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSERYVHMVTRDGFEF 205
Query: 238 WFMGFVYYDSAVKNLQEALQEAQ 260
WFMGFV Y A L +AL ++
Sbjct: 206 WFMGFVSYIDAFNCLNKALLNSR 228
>AT5G23350.1 | chr5:7858545-7859387 REVERSE LENGTH=281
Length = 280
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Query: 99 RKTETLTGNFWQHLKTGPSITDAAMGRVSQITKVIAEGGYDKIFHQTFDVLPDEKLKKPY 158
+KT++ T K GP +T+ ++S K++ GG +KI+ + F V EKL K Y
Sbjct: 117 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAY 176
Query: 159 ACYLSTSAGPVMGVLYLSNKKLAFCSDNPLAYKVGDKD---EWSYYKVVIPHTQLRSVNP 215
CYLST+AGP+ G+L++S+KK+AFCS+ + KV +YKV IP ++ VN
Sbjct: 177 QCYLSTTAGPIAGLLFISSKKIAFCSERSI--KVASPQGVLSRVHYKVSIPLCKINGVNQ 234
Query: 216 STSRTNASEKYIQVVSVDNHEFWFMGFVYYDSAVKNLQEAL 256
S + S+KY+++V++DN +FWFMGFV Y A L++AL
Sbjct: 235 SQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKAL 275
>AT5G23360.1 | chr5:7861817-7862449 FORWARD LENGTH=211
Length = 210
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 98/161 (60%), Gaps = 1/161 (0%)
Query: 99 RKTETLTGNFWQHLKTGPSITDAAMGRVSQITKVIAEGGYDKIFHQTFDVLPDEKLKKPY 158
+KT++ T K GP +T+ ++S K++ GG +KI+ + F V EKL K Y
Sbjct: 47 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106
Query: 159 ACYLSTSAGPVMGVLYLSNKKLAFCSDNPLAYKVGDKD-EWSYYKVVIPHTQLRSVNPST 217
CYLST+ G + G+L++S+KK+AFCS+ + D +YKV IP ++ VN S
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQ 166
Query: 218 SRTNASEKYIQVVSVDNHEFWFMGFVYYDSAVKNLQEALQE 258
+ S++Y++VV+VDN++FWFMGFV Y A L++AL E
Sbjct: 167 NTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNE 207
>AT5G23370.1 | chr5:7863542-7864201 REVERSE LENGTH=220
Length = 219
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 101/160 (63%), Gaps = 3/160 (1%)
Query: 99 RKTETLTGNFWQHLKTGPSITDAAMGRVSQITKVIAEGGYDKIFHQTFDVLPDEKLKKPY 158
+K ++ T K GP +T+ ++S +++ GG +KI+ + F V +EKL K Y
Sbjct: 55 KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114
Query: 159 ACYLSTSAGPVMGVLYLSNKKLAFCSDNPL--AYKVGDKDEWSYYKVVIPHTQLRSVNPS 216
CYLST+AGP+ G+L++S+KK+AFCS+ + A G+ + +YKV IP ++ VN S
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRV-HYKVSIPLCKINGVNQS 173
Query: 217 TSRTNASEKYIQVVSVDNHEFWFMGFVYYDSAVKNLQEAL 256
+ T S+KY++VV+VD +FWFMGF+ Y A L++AL
Sbjct: 174 QNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQAL 213
>AT5G08350.1 | chr5:2686417-2687175 REVERSE LENGTH=223
Length = 222
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 104/185 (56%), Gaps = 10/185 (5%)
Query: 73 APASKNTMDTVKDVLGKMGKRFGEAARKTETLTGNFWQHLKTGPSITDAAMGRVSQITKV 132
A + K+ VK +L + +KT+ T K P +T+ ++S ++
Sbjct: 37 ASSKKSEQSNVKSILKR---------KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARI 87
Query: 133 IAEGGYDKIFHQTFDVLPDEKLKKPYACYLSTSAGPVMGVLYLSNKKLAFCSDNPLAYKV 192
+ GG +KIF + F V EKL K Y CYLST+AGP+ G+L++S+KK+AFCS+ +
Sbjct: 88 LQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDS 147
Query: 193 GDKDEWS-YYKVVIPHTQLRSVNPSTSRTNASEKYIQVVSVDNHEFWFMGFVYYDSAVKN 251
D +YKV IP ++ VN S + S+KY++VV+VD +FWFMGF+ Y A
Sbjct: 148 PQGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNC 207
Query: 252 LQEAL 256
L++AL
Sbjct: 208 LEKAL 212
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.131 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,642,056
Number of extensions: 181208
Number of successful extensions: 427
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 419
Number of HSP's successfully gapped: 9
Length of query: 264
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 167
Effective length of database: 8,447,217
Effective search space: 1410685239
Effective search space used: 1410685239
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)