BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0187500 Os03g0187500|AK059536
(252 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G49980.1 | chr5:20334420-20336531 REVERSE LENGTH=620 352 1e-97
AT4G24390.2 | chr4:12613909-12615966 REVERSE LENGTH=624 331 2e-91
AT1G12820.1 | chr1:4368879-4370780 REVERSE LENGTH=578 275 1e-74
AT3G26810.1 | chr3:9868342-9870464 FORWARD LENGTH=576 260 5e-70
AT4G03190.1 | chr4:1405108-1407057 REVERSE LENGTH=586 253 6e-68
AT3G62980.1 | chr3:23273479-23276181 REVERSE LENGTH=595 232 1e-61
AT2G39940.1 | chr2:16672848-16675486 REVERSE LENGTH=593 127 7e-30
AT4G15475.1 | chr4:8845927-8848701 FORWARD LENGTH=611 66 2e-11
AT5G23340.1 | chr5:7856314-7857983 FORWARD LENGTH=406 52 2e-07
AT4G30640.1 | chr4:14952670-14953682 FORWARD LENGTH=302 51 5e-07
AT5G57900.1 | chr5:23449916-23450915 REVERSE LENGTH=301 51 5e-07
AT5G27920.1 | chr5:9942063-9944507 REVERSE LENGTH=643 51 6e-07
AT2G25490.1 | chr2:10848018-10850275 REVERSE LENGTH=629 49 3e-06
>AT5G49980.1 | chr5:20334420-20336531 REVERSE LENGTH=620
Length = 619
Score = 352 bits (903), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 164/251 (65%), Positives = 204/251 (81%)
Query: 2 LDSVRDEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLTAIAEGCRGLRSTLYFCQ 61
LDS+ DEGLQA A TCK+L+ L + P + ED++ VSE+GL AI+EGCR L S LYFCQ
Sbjct: 369 LDSICDEGLQAVAATCKELRELRIFPFDPREDSEGPVSELGLQAISEGCRKLESILYFCQ 428
Query: 62 SMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLSTSGH 121
MTNAAVIA+S+NC +L VFRLCIMGRH+PDHVTG+PMDEGFGAIV+NC KLTRL+ SG
Sbjct: 429 RMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIVKNCKKLTRLAVSGL 488
Query: 122 LTDRAFEYIGKYAKSLRTLSVAFAGDSNLALQHILQGCSKLEKLEIRDCPFGDAGLLSGM 181
LTD+AF Y+G+Y K +RTLSVAFAGDS++AL+H+L+GC +L+KLEIRD PFGD L SGM
Sbjct: 489 LTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPRLQKLEIRDSPFGDVALRSGM 548
Query: 182 HHFYNMRFLWMSGCNLTLQGCKEVARRLPRLVVELINSQPENERTDSVDILYMYRSLEGP 241
H +YNMRF+WMS C+L+ CK++AR +P LVVE+I S +++ D V+ LYMYRSL+GP
Sbjct: 549 HRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVIGSDDDDDNRDYVETLYMYRSLDGP 608
Query: 242 REDVPPFVKIL 252
R D P FV IL
Sbjct: 609 RNDAPKFVTIL 619
>AT4G24390.2 | chr4:12613909-12615966 REVERSE LENGTH=624
Length = 623
Score = 331 bits (849), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 156/255 (61%), Positives = 198/255 (77%), Gaps = 4/255 (1%)
Query: 2 LDSVRDEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLTAIAEGCRGLRSTLYFCQ 61
LDS+RDEGLQA A TCK+L+ L + P + ED++ VS VGL AI+EGCR L S LYFCQ
Sbjct: 369 LDSIRDEGLQAVAATCKELRELRIFPFDPREDSEGPVSGVGLQAISEGCRKLESILYFCQ 428
Query: 62 SMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLSTSGH 121
+MTN AV A+S+NC L VFRLCIMGRH+PDHVTG+PMD+GFGAIV+NC KLTRL+ SG
Sbjct: 429 NMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAVSGL 488
Query: 122 LTDRAFEYIGKYAKSLRTLSVAFAGDSNLALQHILQGCSKLEKLEIRDCPFGDAGLLSGM 181
LTD AF YIG+Y K +RTLSVAFAG+S+ AL+++L+GC KL+KLEIRD PFGD GL SGM
Sbjct: 489 LTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRDSPFGDVGLRSGM 548
Query: 182 HHFYNMRFLWMSGCNLTLQGCKEVARRLPRLVVELINSQPENERT----DSVDILYMYRS 237
H + NMRF+W+S C ++ GC+ V+ LP +VVE+ + +++ D V+ LY+YRS
Sbjct: 549 HRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDDDEDTVTGDYVETLYLYRS 608
Query: 238 LEGPREDVPPFVKIL 252
L+GPR+D P FV IL
Sbjct: 609 LDGPRKDAPKFVTIL 623
>AT1G12820.1 | chr1:4368879-4370780 REVERSE LENGTH=578
Length = 577
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/261 (51%), Positives = 181/261 (69%), Gaps = 9/261 (3%)
Query: 1 VLDSVRDEGLQATARTCKKLQVLHVLP--LNALEDADELVSEVGLTAIAEGCRGLRSTLY 58
+LDS+ D+GL A TCK+LQ L V P ++ ED + V+EVGL AI+ GC L S LY
Sbjct: 317 ILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNASVTEVGLVAISAGCPKLHSILY 376
Query: 59 FCQSMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLST 118
FC+ MTNAA+IA+++NC + FRLCI+ H+PDH+T + +DEGFGAIV+ C L RLS
Sbjct: 377 FCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGAIVQACKGLRRLSV 436
Query: 119 SGHLTDRAFEYIGKYAKSLRTLSVAFAGDSNLALQHILQGCSKLEKLEIRDCPFGDAGLL 178
SG LTD+ F YIG YA+ L LS+AFAGD++ + ++L GC K+ KLEIRD PFG+A LL
Sbjct: 437 SGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKLEIRDSPFGNAALL 496
Query: 179 SGMHHFYNMRFLWMSGCNLTLQGCKEVARRLPRLVVELIN-------SQPENERTDSVDI 231
+ + + MR LWMS C +TL GCK +A+ PRL VE+IN Q E + + VD
Sbjct: 497 ADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENENNGMEQNEEDEREKVDK 556
Query: 232 LYMYRSLEGPREDVPPFVKIL 252
LY+YR++ G R+D PP+V+IL
Sbjct: 557 LYLYRTVVGTRKDAPPYVRIL 577
>AT3G26810.1 | chr3:9868342-9870464 FORWARD LENGTH=576
Length = 575
Score = 260 bits (664), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/259 (51%), Positives = 173/259 (66%), Gaps = 7/259 (2%)
Query: 1 VLDSVRDEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLTAIAEGCRGLRSTLYFC 60
+LDS+ D+GL+ A TCK+LQ L V P + L + V+E GL AI+ GC L S LYFC
Sbjct: 317 ILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNTAVTEEGLVAISAGCPKLHSILYFC 376
Query: 61 QSMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLSTSG 120
Q MTNAA++ +++NC + FRLCI+ ++PDHVT +P+DEGFGAIV+ C L RLS SG
Sbjct: 377 QQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAIVKACKSLRRLSLSG 436
Query: 121 HLTDRAFEYIGKYAKSLRTLSVAFAGDSNLALQHILQGCSKLEKLEIRDCPFGDAGLLSG 180
LTD+ F YIG YA L LS+AFAGD++ + ++L GC K++KLEIRD PFGD LL+
Sbjct: 437 LLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLEIRDSPFGDTALLAD 496
Query: 181 MHHFYNMRFLWMSGCNLTLQGCKEVARRLPRLVVELINSQPEN-------ERTDSVDILY 233
+ + MR LWMS C +TL GCK +A + P L VE+IN N E VD LY
Sbjct: 497 VSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNRMEENGHEGRQKVDKLY 556
Query: 234 MYRSLEGPREDVPPFVKIL 252
+YR++ G R D PPFV IL
Sbjct: 557 LYRTVVGTRMDAPPFVWIL 575
>AT4G03190.1 | chr4:1405108-1407057 REVERSE LENGTH=586
Length = 585
Score = 253 bits (647), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 123/252 (48%), Positives = 168/252 (66%), Gaps = 3/252 (1%)
Query: 1 VLDSVRDEGLQATARTCKKLQVLHVLPLNALEDADEL-VSEVGLTAIAEGCRGLRSTLYF 59
V+D + D+GL+A A CK+L+ L V P DA + ++E GL +++GCR L S LYF
Sbjct: 317 VMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGLVFVSKGCRKLESVLYF 376
Query: 60 CQSMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLSTS 119
C TNAA+ I++ +LK FRLC++ PD+ T EP+D+GF AI C L RLS S
Sbjct: 377 CVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFKAIAEGCRDLRRLSVS 436
Query: 120 GHLTDRAFEYIGKYAKSLRTLSVAFAGDSNLALQHILQGCSKLEKLEIRDCPFGDAGLLS 179
G L+D+AF+YIGK+AK +R LS+AFAGDS+L L H+L GC L+KLEIRDCPFGD LL
Sbjct: 437 GLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLKKLEIRDCPFGDTALLE 496
Query: 180 GMHHFYNMRFLWMSGCNLTLQGCKEVARRLPRLVVELINSQPENERTDS--VDILYMYRS 237
MR LWMS C ++ CK +++++PRL VE+I+ P R +S V+ +Y+YR+
Sbjct: 497 HAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVIDEHPPESRPESSPVERIYIYRT 556
Query: 238 LEGPREDVPPFV 249
+ GPR D P FV
Sbjct: 557 VAGPRMDTPEFV 568
>AT3G62980.1 | chr3:23273479-23276181 REVERSE LENGTH=595
Length = 594
Score = 232 bits (592), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/253 (48%), Positives = 170/253 (67%), Gaps = 4/253 (1%)
Query: 1 VLDSVRDEGLQATARTCKKLQVLHVLPLNA-LEDADELVSEVGLTAIAEGCRGLRSTLYF 59
VLD + D GL+ A TCK L+ L V P + + + ++E GL +++ GC L S LYF
Sbjct: 321 VLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYF 380
Query: 60 CQSMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLSTS 119
C+ MTNAA+I I++N ++ FRLCI+ PD++T EP+D GFGAIV +C L RLS S
Sbjct: 381 CRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLS 440
Query: 120 GHLTDRAFEYIGKYAKSLRTLSVAFAGDSNLALQHILQGCSKLEKLEIRDCPFGDAGLLS 179
G LTD+ FEYIG YAK + LSVAFAGDS+L + H+L GC L KLEIRDCPFGD LL+
Sbjct: 441 GLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLA 500
Query: 180 GMHHFYNMRFLWMSGCNLTLQGCKEVARRLPRLVVELINSQ-PENERTDS--VDILYMYR 236
MR LWMS C+++ CK + +++P+L VE+I+ + + R +S V+ +++YR
Sbjct: 501 NASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPDSRPESCPVERVFIYR 560
Query: 237 SLEGPREDVPPFV 249
++ GPR D+P FV
Sbjct: 561 TVAGPRFDMPGFV 573
>AT2G39940.1 | chr2:16672848-16675486 REVERSE LENGTH=593
Length = 592
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 16/262 (6%)
Query: 5 VRDEGLQATARTCKKLQVLHV---LPLNALEDADELVSEVGLTAIAEGCRGLRSTLYFCQ 61
+ D GL+ A+ CK+L+ L + +ED + LVS+ GL A+A+GC+ L +
Sbjct: 329 IGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVS 388
Query: 62 SMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLS---T 118
+TN ++ +I +L FRL ++ R + +T P+D G +++ C KL R +
Sbjct: 389 DITNESLESIGTYLKNLCDFRLVLLDREE--RITDLPLDNGVRSLLIGCKKLRRFAFYLR 446
Query: 119 SGHLTDRAFEYIGKYAKSLRTLSVAFAGDSNLALQHILQGCSKLEKLEIRDCPFGDAGLL 178
G LTD YIG+Y+ ++R + + + G+S+ L +GC L+KLE+R C F + +
Sbjct: 447 QGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIA 506
Query: 179 SGMHHFYNMRFLWMSGCNLTLQGCKEVARRLPRLVVELI--------NSQPENERTDSVD 230
+ + ++R+LW+ G ++ G + P +ELI N Q E +
Sbjct: 507 AAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRVPEVNQQGEIREMEHPA 566
Query: 231 ILYMYRSLEGPREDVPPFVKIL 252
+ Y SL G R D P V++L
Sbjct: 567 HILAYYSLAGQRTDCPTTVRVL 588
>AT4G15475.1 | chr4:8845927-8848701 FORWARD LENGTH=611
Length = 610
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 39/217 (17%)
Query: 5 VRDEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLTAIAEGCRGLRSTLYFCQSMT 64
+ D L+A CK L+VL++ E + + GL A+A+GC L++ C S+T
Sbjct: 231 ITDLSLEAVGSHCKLLEVLYL--------DSEYIHDKGLIAVAQGCHRLKNLKLQCVSVT 282
Query: 65 NAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMD----------------------EG 102
+ A A+ + C L+ L + H T + M +G
Sbjct: 283 DVAFAAVGELCTSLERLAL-----YSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKG 337
Query: 103 FGAIVRNCSKLTRLSTSG--HLTDRAFEYIGKYAKSLRTLSVAFAGD-SNLALQHILQGC 159
AI C +L R+ +G ++ R E IGK L+ L++ + N ALQ I +GC
Sbjct: 338 LEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGC 397
Query: 160 SKLEKLEIRDCP-FGDAGLLSGMHHFYNMRFLWMSGC 195
LE L + DC GD + S N++ L + C
Sbjct: 398 KSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRC 434
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 37/191 (19%)
Query: 5 VRDEGLQATARTCKKLQVLHVLPLNALED--------------------ADELVSEVGLT 44
V D+GL A + CK+L+ L++ L D A ++++ L
Sbjct: 178 VGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLE 237
Query: 45 AIAEGCRGLRSTLYFCQSMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFG 104
A+ C+ L + + + +IA++Q C LK +L Q VT D F
Sbjct: 238 AVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKL------QCVSVT----DVAFA 287
Query: 105 AIVRNCSKLTRLS--TSGHLTDRAFEYIGKYAKSLRTLSVA---FAGDSNLALQHILQGC 159
A+ C+ L RL+ + H TD+ IGK +K L+ L+++ F S L+ I GC
Sbjct: 288 AVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFV--SCKGLEAIAHGC 345
Query: 160 SKLEKLEIRDC 170
+LE++EI C
Sbjct: 346 KELERVEINGC 356
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 47/197 (23%)
Query: 5 VRDEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLTAIAEGCRGLRS--------- 55
+ + LQ + CK L++LH++ + + D + + +IA+GCR L+
Sbjct: 385 IGNSALQEIGKGCKSLEILHLVDCSGIGD-------IAMCSIAKGCRNLKKLHIRRCYEI 437
Query: 56 ------------------TLYFCQSMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGE 97
+L FC + N A+IAI + C + +L + G +Q
Sbjct: 438 GNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGC---SLQQLNVSGCNQIS----- 489
Query: 98 PMDEGFGAIVRNCSKLTRLSTS--GHLTDRAFEYIGKYAKSLRTLSVAFAGD-SNLALQH 154
D G AI R C +LT L S ++ D +G+ L+ L ++ ++ L H
Sbjct: 490 --DAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNH 547
Query: 155 ILQGCSKLEKLEIRDCP 171
++Q C LE + CP
Sbjct: 548 LVQKCKLLETCHMVYCP 564
>AT5G23340.1 | chr5:7856314-7857983 FORWARD LENGTH=406
Length = 405
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 26/197 (13%)
Query: 5 VRDEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLTAIAEGCRGLRST-LYFCQSM 63
+ D GL + R LQ L V L D GL+A+AEGC LR+ L C+ +
Sbjct: 111 ITDTGLASIGRCLSLLQFLDVSYCRKLSDK-------GLSAVAEGCHDLRALHLAGCRFI 163
Query: 64 TNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLSTS--GH 121
T+ ++ ++S+ C DL+ +G ++T D G +V+ C K+ L + +
Sbjct: 164 TDESLKSLSERCRDLEA-----LGLQGCTNIT----DSGLADLVKGCRKIKSLDINKCSN 214
Query: 122 LTDRAFEYIGKY-AKSLRTLSVAFAGD-SNLALQHILQGCSKLEKLEIRDC-PFGDAGLL 178
+ D + K A SL+TL + N ++ + Q C LE L I C D ++
Sbjct: 215 VGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIM 274
Query: 179 ----SGMHHFYNMRFLW 191
S N+R W
Sbjct: 275 LLADSCKDSLKNLRMDW 291
>AT4G30640.1 | chr4:14952670-14953682 FORWARD LENGTH=302
Length = 301
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 7 DEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLTAIAEGCRGLRS-TLYFCQSMTN 65
+ L A C L+VL + + DA + IA C LR + + +T+
Sbjct: 113 ERSLSYAAERCPNLEVLWIKNCPNVTDA-------SMEKIAMNCPNLRELDISYSYGITH 165
Query: 66 AAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLSTSGHLTDR 125
++I + ++C +LK+ + ++ R P T IV L G++ R
Sbjct: 166 ESLITLGRSCQNLKILKRNLLPRLGPSLPT----------IVAPLDYLATFPRYGNIEAR 215
Query: 126 AFEYIGKYAKSLRTLSVAFAGDSNLALQHILQGCSKLEKLEIRDC 170
IGKY L+ L + ++ + L + +GCS LE +++R C
Sbjct: 216 I---IGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGC 257
>AT5G57900.1 | chr5:23449916-23450915 REVERSE LENGTH=301
Length = 300
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 23/165 (13%)
Query: 7 DEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLTAIAEGCRGLRS-TLYFCQSMTN 65
D L A C LQVL + + DA +T IA CR L+ + +C +++
Sbjct: 101 DHALSYAADRCPNLQVLAIRSSPNVTDA-------SMTKIAFRCRSLKELDISYCHEISH 153
Query: 66 AAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLSTSGHLTDR 125
++ I +NC +L++ + +M H+ P + L D
Sbjct: 154 DTLVMIGRNCPNLRILKRNLMD-WSSRHIGSVPTE--------------YLDACPQDGDT 198
Query: 126 AFEYIGKYAKSLRTLSVAFAGDSNLALQHILQGCSKLEKLEIRDC 170
+ IGK+ +L L + F+ S L I +GC KLE L++ C
Sbjct: 199 EADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGC 243
>AT5G27920.1 | chr5:9942063-9944507 REVERSE LENGTH=643
Length = 642
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 12/172 (6%)
Query: 38 VSEVGLTAIAEGCRGLRS-TLYFCQSMTNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTG 96
V+++G+ ++A C L++ L C +T+ A+ A++Q+C +L +L + H+
Sbjct: 338 VTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKL------ESCHLIT 391
Query: 97 EPMDEGFGAIVRNCSKLTRLSTSGHLTDRAFEYIGKYAKSLRTLSVAFAGD-SNLALQHI 155
E + G +L G + DR EYI K +L+ L + + S+ + HI
Sbjct: 392 EKGLQSLGCYSMLVQELDLTDCYG-VNDRGLEYISK-CSNLQRLKLGLCTNISDKGIFHI 449
Query: 156 LQGCSKLEKLEIRDCP-FGDAGLLSGMHHFYNMRFLWMS-GCNLTLQGCKEV 205
CSKL +L++ C FGD GL + ++ L +S C LT G +++
Sbjct: 450 GSKCSKLLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQI 501
>AT2G25490.1 | chr2:10848018-10850275 REVERSE LENGTH=629
Length = 628
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 75/255 (29%)
Query: 5 VRDEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLTAIAEGCRGL-RSTLYFCQSM 63
V D GL++ R+C L L + ++ + D GL IAEGC L + L C ++
Sbjct: 164 VSDLGLRSIGRSCPSLGSLSLWNVSTITDN-------GLLEIAEGCAQLEKLELNRCSTI 216
Query: 64 TNAAVIAISQNCVDLKVFRLCIMGRHQPDHVTGEPMDEGFGAIVRNCSKLTRLSTSG--- 120
T+ ++AI+++C +L L DEG AI R+CSKL +S
Sbjct: 217 TDKGLVAIAKSCPNLTELTL---------EACSRIGDEGLLAIARSCSKLKSVSIKNCPL 267
Query: 121 -------------------------HLTDRAFEYIGKYAKS------------------- 136
++TD + +G Y S
Sbjct: 268 VRDQGIASLLSNTTCSLAKLKLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWV 327
Query: 137 ---------LRTLSV-AFAGDSNLALQHILQGCSKLEKLEIRDCP-FGDAGLLSGMHHFY 185
L +L++ A G +++ L+ + +GC ++K I P D GL+S
Sbjct: 328 MGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASL 387
Query: 186 NMRFLWMSGCNLTLQ 200
++ L + C+ Q
Sbjct: 388 SLESLQLEECHRVTQ 402
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,177,128
Number of extensions: 198865
Number of successful extensions: 693
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 667
Number of HSP's successfully gapped: 18
Length of query: 252
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 156
Effective length of database: 8,474,633
Effective search space: 1322042748
Effective search space used: 1322042748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 110 (47.0 bits)