BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0178300 Os03g0178300|AK121217
(317 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G21950.1 | chr5:7254067-7255866 REVERSE LENGTH=309 174 4e-44
AT4G33180.1 | chr4:16000282-16002055 FORWARD LENGTH=308 167 6e-42
AT1G78210.1 | chr1:29422820-29424294 REVERSE LENGTH=315 120 8e-28
AT4G39955.1 | chr4:18530573-18532088 FORWARD LENGTH=329 112 2e-25
AT1G17430.1 | chr1:5982310-5983919 FORWARD LENGTH=333 109 2e-24
AT5G09430.1 | chr5:2932162-2933362 FORWARD LENGTH=312 107 6e-24
AT1G72620.1 | chr1:27341079-27342401 FORWARD LENGTH=336 102 2e-22
AT2G18360.1 | chr2:7976848-7979221 REVERSE LENGTH=314 101 4e-22
AT4G36610.1 | chr4:17265545-17267274 REVERSE LENGTH=318 100 2e-21
>AT5G21950.1 | chr5:7254067-7255866 REVERSE LENGTH=309
Length = 308
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 154/317 (48%), Gaps = 20/317 (6%)
Query: 3 FGVIPLMEYIARRAFLAAGLRPSTVTLPSTSGDGEARTIHYW-----AXXXXXXXXXXXX 57
V +E + RR F +AGL T+++ S + TI +W +
Sbjct: 6 LSVARFVEALLRRRFSSAGLSLQTLSIDSET------TIQFWGPPPSSSSENTQKPSLLL 59
Query: 58 IHGFGPMATWQWRRQVGPFSRRFHIIVPDLLCFGXXXXXXXXXXXXXXXXXXXXXXXXXX 117
+HGFGP A WQW QV P S F + VPDL+ FG
Sbjct: 60 LHGFGPSAVWQWSHQVKPLSHFFRLYVPDLVFFGGSSSSGENRSEMFQALCMGKLMEKLE 119
Query: 118 XXXXXXXXXXXXSYGGFVAYAMARKAGPERVGPVAISNSDLLKTAEDDGAFLERAGSGWT 177
SYGGFVAY MA K PE+V V +++S + D+ AF+ RA
Sbjct: 120 VERFSVVGT---SYGGFVAYNMA-KMFPEKVEKVVLASSGVNLRRSDNEAFIARAKCHRI 175
Query: 178 HPADVLMPLDARGARRLMELTFYRKQAGAMLPDFVIRDIMKKLFSDKREEKIELMNATTV 237
+V++P A RR + ++ +PDFV+ D +K++S+KREEK EL+ ++
Sbjct: 176 K--EVMLPASATDLRRFSGMVSSKRLD--YVPDFVLNDFCQKMYSEKREEKAELLEGLSI 231
Query: 238 GTD-AFQLTPLAQDVLLIWGDHDQIFPLDKAFAVKSCLGDHVRLEIIKKTGHVPQMEDPD 296
G D ++P+ QDV+LIWG+ DQ+FPL A +K LG L++I+KT H+PQ E
Sbjct: 232 GKDDKTNVSPIQQDVMLIWGEQDQVFPLKMAHDLKEMLGTKATLKVIQKTSHIPQTEKSK 291
Query: 297 RFNKIVLDFLLGSQGSP 313
FN V+ FLL SP
Sbjct: 292 EFNGFVMSFLLPPSPSP 308
>AT4G33180.1 | chr4:16000282-16002055 FORWARD LENGTH=308
Length = 307
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 148/309 (47%), Gaps = 20/309 (6%)
Query: 8 LMEYIARRAFLAAGLRPSTVTLPSTSGDGEARTIHYWA-----XXXXXXXXXXXXIHGFG 62
L+E RR AAGL T+++ S + TIH+W +HGFG
Sbjct: 12 LLEGYLRRCLRAAGLTSQTLSIDSET------TIHFWGPPPLDHRSDDDRPVMLLLHGFG 65
Query: 63 PMATWQWRRQVGPFS-RRFHIIVPDLLCFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 121
P + WQWRRQ+ FS F + PDL+ FG
Sbjct: 66 PSSMWQWRRQMQAFSPSAFRVYSPDLVFFGDSTSSSTNRTEVFQAECMAKLMAKIGIGKY 125
Query: 122 XXXXXXXXSYGGFVAYAMARKAGPERVGPVAISNSDLLKTAEDDGAFLERAGSGWTHPAD 181
SYGGFVAY MA K PE+V V I++S + D + L+R+
Sbjct: 126 NVAGT---SYGGFVAYHMA-KMWPEKVEKVVIASSGINMRKCDGESLLQRSNCECIE--K 179
Query: 182 VLMPLDARGARRLMELTFYRKQAGAMLPDFVIRDIMKKLFSDKREEKIELMNATTVG-TD 240
V++P A R LM L + M PD + D++ L+ R+EKIEL+ T G ++
Sbjct: 180 VMLPSTATEFRTLMALASSWRLV-RMFPDALWNDVINNLYKKNRKEKIELLKGVTFGRSE 238
Query: 241 AFQLTPLAQDVLLIWGDHDQIFPLDKAFAVKSCLGDHVRLEIIKKTGHVPQMEDPDRFNK 300
+ L+Q+VL++WGD DQIFP+ A+ +K LGD +LEII T HVPQ+E FN
Sbjct: 239 NLNIDSLSQEVLIVWGDKDQIFPVKMAYELKEILGDKTKLEIIDNTSHVPQIECAQEFNN 298
Query: 301 IVLDFLLGS 309
IVL FL GS
Sbjct: 299 IVLRFLKGS 307
>AT1G78210.1 | chr1:29422820-29424294 REVERSE LENGTH=315
Length = 314
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 135/311 (43%), Gaps = 15/311 (4%)
Query: 3 FGVIPLMEYIARRAFLAAGLRPSTVTLPSTSGDGEARTIHYWAXXXXXXXX---XXXXIH 59
F + +E + F +GLRP T+ L DG +++W IH
Sbjct: 5 FSLSEALERTYKSGFKRSGLRPVTIDL----KDGTV--VNFWVSKTKPESKPKPNLLLIH 58
Query: 60 GFGPMATWQWRRQVGPFSRRFHIIVPDLLCFGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 119
G G A WQW SR F++ +PDL+ FG
Sbjct: 59 GLGATAIWQWYDVARRLSRYFNLYIPDLVFFGGSSTTRPERSDIFQAQTLMRALEAQSVK 118
Query: 120 XXXXXXXXXXSYGGFVAYAMARKAGPERVGPVAISNSDLLKTAEDDGAFLERAGSGWTHP 179
SYGGFV Y MA + V V I + + +D A + + S
Sbjct: 119 KFSLVGL---SYGGFVGYRMASMYA-DAVEKVVICCAAVCVEEKDMKAGVFKV-SDLDEA 173
Query: 180 ADVLMPLDARGARRLMELTFYRKQAGAMLPDFVIRDIMKK-LFSDKREEKIELMNATTVG 238
+ +L+P + R LM FY+ ++P ++ D ++ L D EEK EL+ A
Sbjct: 174 SKILVPESVKKLRELMGYIFYKPALARLVPTCLLHDFIEHALTRDNMEEKRELIKAIPKD 233
Query: 239 TDAFQLTPLAQDVLLIWGDHDQIFPLDKAFAVKSCLGDHVRLEIIKKTGHVPQMEDPDRF 298
++ L Q L+IWG+HDQ+FPL+ ++ +GD+ +L IIK+TGH+ E P +F
Sbjct: 234 RIISEIPKLKQPTLIIWGEHDQVFPLEMGKRLEKHVGDNGKLVIIKRTGHIFNFEKPKKF 293
Query: 299 NKIVLDFLLGS 309
K++ FLL +
Sbjct: 294 IKLLKSFLLET 304
>AT4G39955.1 | chr4:18530573-18532088 FORWARD LENGTH=329
Length = 328
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 129/306 (42%), Gaps = 19/306 (6%)
Query: 16 AFLAAGLRPSTVTLPSTSGDGEARTIHYWAXXXXXXXX-XXXXIHGFGPMATWQWRRQVG 74
+F AGLR ST L GDG H W +HG G A WQW R +
Sbjct: 18 SFSRAGLRSSTSDL----GDGT--VFHCWIPLTHIHTKPTLLLLHGIGANAMWQWDRFID 71
Query: 75 PFSRRFHIIVPDLLCFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYGGF 134
F RF++ VPDL+ FG SYGGF
Sbjct: 72 RFIPRFNVYVPDLIFFGDSYTTRPDRSESFQATCVMKAMDAYGVRTMTVAGL---SYGGF 128
Query: 135 VAYAMARKAGPERVGPVAI--SNSDLLKTAEDDGAFLERAGSGWTHPADVLMPLDARGAR 192
VAY++A + ERV V + + L + +DG F ++ A VL P R
Sbjct: 129 VAYSLAAQFK-ERVDRVVLICAGVALEEKDSEDGMFKVKSPE---EAAAVLFPQSPSMLR 184
Query: 193 RLMELTFYRKQAGAMLPDFVIRDIMKKLFSDKREEKIELMNATTVGTDAFQLTPLAQDVL 252
RL++L+FY+ +P D + + D +E+ EL+ A G L + Q L
Sbjct: 185 RLLQLSFYK--PPIWIPSCFAMDYIHVMCKDYLQERKELVEALHKGRRFANLPKITQPTL 242
Query: 253 LIWGDHDQIFPLDKAFAVKSCLG-DHVRLEIIKKTGHVPQMEDPDRFNKIVLDFLLGSQG 311
+IWG+ DQ+FP++ A +K LG D +L ++KKTGH E P K + FL
Sbjct: 243 MIWGEEDQVFPVELAHRLKRYLGEDRAQLVLLKKTGHAINEEKPKEMYKHMKSFLCTDAM 302
Query: 312 SPSNEH 317
P N
Sbjct: 303 IPQNHQ 308
>AT1G17430.1 | chr1:5982310-5983919 FORWARD LENGTH=333
Length = 332
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 131/291 (45%), Gaps = 13/291 (4%)
Query: 22 LRPSTVTLPSTSGDGEARTIHYW-AXXXXXXXXXXXXIHGFGPMATWQWRRQVGPFSRRF 80
LRP TV L DGE T+H+W + +HG+G + WQ+ QV S+ F
Sbjct: 52 LRPVTVDLD----DGET-TVHFWISGHRRISRQNLVMLHGYGGNSKWQFVHQVSDLSKSF 106
Query: 81 HIIVPDLLCFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXSYGGFVAYAM 139
++ +PDL+ FG SYGGFVAY M
Sbjct: 107 NLFIPDLVFFGKSYSKNRDRSVEIQARSVVGGLKKLGCVEGGGGISIYSISYGGFVAYKM 166
Query: 140 ARKAGPERVGPVAISNSDLLKTAEDDGAFLERAGSGWTHPADVLMPLDARGARRLMELTF 199
A + P V + I +S + T + A L++ G + +L+P R L++++
Sbjct: 167 A-EIWPAMVEKLVIVSSGVGFTQQQKTAELKKHGGD---CSKILVPKTPMDLRLLIKISM 222
Query: 200 YRKQAGA-MLPDFVIRDIMKKLFSDKREEKIELMNATTVGTDAFQLTPLAQDVLLIWGDH 258
+PDF + + ++ R+E +EL + +L ++Q L++WGD
Sbjct: 223 NTGLTFVDWVPDFFLSQFIAVMYEKNRQELLELAKNLLEREEEPELPVISQKTLIVWGDK 282
Query: 259 DQIFPLDKAFAVKSCLGDHVRLEIIKKTGHVPQMEDPDRFNKIVLDFLLGS 309
D++FPL+ A+ ++ L RLEIIK+TGH +E P N + F+L +
Sbjct: 283 DKVFPLEHAYRLQRHLQSS-RLEIIKETGHAVNIEAPTTLNNFITSFVLSA 332
>AT5G09430.1 | chr5:2932162-2933362 FORWARD LENGTH=312
Length = 311
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 135/308 (43%), Gaps = 23/308 (7%)
Query: 10 EYIARRAFLAAGLRPSTVTLPSTSGDGEART-IHYWAXXXXXXXX-XXXXIHGFGPMATW 67
+++ R++F AGLR T L + G+ A T +H W +HGFG A W
Sbjct: 18 DWLFRQSFANAGLRSVTTDL--SHGNSIASTAMHCWIPKSPNRSKPNLLLLHGFGANAMW 75
Query: 68 QWRRQVGPFSRRFHIIVPDLLCFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 127
Q+ + F+ RF++ VPDLL FG
Sbjct: 76 QYGEHLRAFTGRFNVYVPDLLFFGLSSTSEPNRTESFQARCLMRLMEAHGVQRMNIVGI- 134
Query: 128 XXSYGGFVAYAMARKAGPERVGPVAISNSDLLKTAED--DGAF----LERAGSGWTHPAD 181
SYGGFV Y++A + PE V + + + + +D DG F LE A
Sbjct: 135 --SYGGFVGYSLAAQF-PENVEKLVLCCAGVCLEEKDMEDGLFKVPNLEEA-------TG 184
Query: 182 VLMPLDARGARRLMELTFYRKQAGAMLPDFVIRDIMKKLFSDKREEKIELMNATTVGTDA 241
+L+P + L+ +F + G +P F + D + + ++ EEK +L+ +
Sbjct: 185 ILIPQTPEKLKELIRFSFVKPIKG--VPSFFLWDFIDVMCTEFVEEKRDLIKSILKDRRL 242
Query: 242 FQLTPLAQDVLLIWGDHDQIFPLDKAFAVKSCLGDHVRLEIIKKTGHVPQMEDPDRFNKI 301
L + Q L+IWG+ DQIFPL+ + +K +G+ + +IKK GH +E F K
Sbjct: 243 SDLPRIKQKSLIIWGEEDQIFPLELGYRLKRHIGESAEIVVIKKAGHAVNLEKSKEFVKH 302
Query: 302 VLDFLLGS 309
+ FL+ S
Sbjct: 303 LKSFLIDS 310
>AT1G72620.1 | chr1:27341079-27342401 FORWARD LENGTH=336
Length = 335
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 13/300 (4%)
Query: 11 YIARRAFLAAGLRPSTVTLPSTSGDGEARTIHYW-AXXXXXXXXXXXXIHGFGPMATWQW 69
+++ + LRP TV L DGE T+H+W + +HG+G + WQ+
Sbjct: 45 FLSLYFLIFCDLRPITVDL----NDGET-TLHFWISGHRKINRPNLVMLHGYGGNSKWQF 99
Query: 70 RRQVGPFSRRFHIIVPDLLCFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 129
QV S+ F++ +PDL+ FG
Sbjct: 100 IHQVSDLSKSFNLFIPDLVFFGKSYSRNTDRTIEFQARSIVGGLKRLGCGDGDLSVYSI- 158
Query: 130 SYGGFVAYAMARKAGPERVGPVAISNSDLLKTAEDDGAFLERAGSGWTHPADVLMPLDAR 189
SYGGFVAY +A K PE + + I +S + T + +++ G +++L+P + R
Sbjct: 159 SYGGFVAYRIA-KIWPEMIEKLVIVSSGVGFTQQQKMTEMKKHGGD---VSEILVPSNPR 214
Query: 190 GARRLMELTFYRK-QAGAMLPDFVIRDIMKKLFSDKREEKIELMNATTVGTDAFQLTPLA 248
R L++++ + +PDF++ + ++ R+E ++L + +L ++
Sbjct: 215 DLRLLVKVSMNTGIRFLDWVPDFILSQFIAVMYETNRQELVDLAKNLLEREEEPELFSIS 274
Query: 249 QDVLLIWGDHDQIFPLDKAFAVKSCLGDHVRLEIIKKTGHVPQMEDPDRFNKIVLDFLLG 308
Q L++WGD D +FPL+ ++ L + LE++K+ GH +E P N +++ F+LG
Sbjct: 275 QRTLIVWGDKDNVFPLEHGRRLQRHLPNS-SLEVLKEIGHGVNIEAPTTLNNLIISFVLG 333
>AT2G18360.1 | chr2:7976848-7979221 REVERSE LENGTH=314
Length = 313
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 115/249 (46%), Gaps = 10/249 (4%)
Query: 58 IHGFGPMATWQWRRQVGPFSRRFHIIVPDLLCFGXXXXXXXXXXXXXXXXXXXXXXXXXX 117
IHGF W+ QVG ++++ + +PDLL FG
Sbjct: 68 IHGFAAEGIVTWQFQVGSLAKKYSVYIPDLLFFGGSYSDNADRSPAFQAHCLVKSLRILG 127
Query: 118 XXXXXXXXXXXXSYGGFVAYAMARKAGPERVGPVAISNSDLLKTAEDDGAFLERAGSGWT 177
SYGG VA+ +A + PE V + +S S L T + L + G +
Sbjct: 128 IEKFTLVGF---SYGGMVAFKIAEEY-PEMVQAMVVSGSILAMTDTISESNLNQLG--FK 181
Query: 178 HPADVLMPLDARGARRLMELTFYRKQAGAMLPDFVIRDIMKKLFSDKREEKIELMNATTV 237
AD+L+P +G + L L ++ P + +D ++ + ++ R+E+ EL+ A +
Sbjct: 182 SSADLLLPTSVKGLKTLFTLAVHKPM---WFPKRLFKDFIEVMITN-RKERAELLEALVI 237
Query: 238 GTDAFQLTPLAQDVLLIWGDHDQIFPLDKAFAVKSCLGDHVRLEIIKKTGHVPQMEDPDR 297
+ Q + L+WG+ DQIF L+ A ++K LG++ +E IKK GH+ +E P
Sbjct: 238 SNKDVTIPRFQQKIHLLWGESDQIFNLEFAKSMKEQLGENATMESIKKAGHLAHLERPCV 297
Query: 298 FNKIVLDFL 306
+N+ + FL
Sbjct: 298 YNRRLKKFL 306
>AT4G36610.1 | chr4:17265545-17267274 REVERSE LENGTH=318
Length = 317
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 116/249 (46%), Gaps = 10/249 (4%)
Query: 58 IHGFGPMATWQWRRQVGPFSRRFHIIVPDLLCFGXXXXXXXXXXXXXXXXXXXXXXXXXX 117
IHGF W+ QVG S+++ + +PDLL FG
Sbjct: 66 IHGFAGEGIVTWQFQVGALSKKYSVYIPDLLFFGGSYTDNSDRSPAFQADCLVKGLRILG 125
Query: 118 XXXXXXXXXXXXSYGGFVAYAMARKAGPERVGPVAISNSDLLKTAEDDGAFLERAGSGWT 177
SYGG VA+ +A +A P+ V + +S S T + A L R G ++
Sbjct: 126 VDKFVPVGF---SYGGMVAFKIA-EAYPDMVRAIVVSGSIPTMTDTINEASLNRLG--FS 179
Query: 178 HPADVLMPLDARGARRLMELTFYRKQAGAMLPDFVIRDIMKKLFSDKREEKIELMNATTV 237
D+L+P G + L + ++ P + +D ++ +F++ R+E+ EL+ A V
Sbjct: 180 SSTDLLLPTSVTGLKALFTIAVHKP---LWFPKRLFKDYIEVMFNN-RKERAELLEAVVV 235
Query: 238 GTDAFQLTPLAQDVLLIWGDHDQIFPLDKAFAVKSCLGDHVRLEIIKKTGHVPQMEDPDR 297
Q+ + + +WG+ DQIF L+ A +K +G++ +E IKK GH+ Q+E P
Sbjct: 236 SNKEAQIPHFPRKIHFLWGESDQIFDLELARDMKEQIGENATIESIKKAGHLVQLERPCV 295
Query: 298 FNKIVLDFL 306
+N+ + FL
Sbjct: 296 YNRRLKKFL 304
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.140 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,876,398
Number of extensions: 213433
Number of successful extensions: 455
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 440
Number of HSP's successfully gapped: 13
Length of query: 317
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 218
Effective length of database: 8,392,385
Effective search space: 1829539930
Effective search space used: 1829539930
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)