BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0168000 Os03g0168000|AK072898
         (457 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60070.1  | chr3:22183572-22185941 REVERSE LENGTH=459          543   e-155
AT2G44280.1  | chr2:18301563-18303927 REVERSE LENGTH=463          529   e-150

>AT3G60070.1 | chr3:22183572-22185941 REVERSE LENGTH=459
          Length = 458

 Score =  543 bits (1399), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 259/430 (60%), Positives = 334/430 (77%), Gaps = 5/430 (1%)

Query: 16  PLGRWPILSYGVGHMLNDITSACWFTYLLLFLQEIGLAPRDAAIVMLSGQVADGLMTILA 75
           P+GRW +  YGVGHMLNDIT++CWFTYLLLFL +IGL+PRDAAIVMLSGQVAD   TI  
Sbjct: 13  PIGRWSVFFYGVGHMLNDITASCWFTYLLLFLTQIGLSPRDAAIVMLSGQVADAFATIFT 72

Query: 76  GEMIDRFGHFKLWHIGGSILVGISFSSVFGGCLLCTVLGTDSYLVRTIGYSFFAAVFNIG 135
           GE+IDRFGHFK+WH  GS+LV ISFSSVFGGCL C++L  DS  + T  YS FAA+FNIG
Sbjct: 73  GELIDRFGHFKIWHAAGSLLVAISFSSVFGGCLPCSILHNDSLTLETFSYSMFAAIFNIG 132

Query: 136 WAATQVSHMSMVNCMTLNSTSRVALASCRNAFTMVANLGLYAIALVVFALVSAKACSDIV 195
           WAATQVSHM+MVNC++LNSTSRVAL S RNAFTMVANLGLYAIALVVF ++ A +  D  
Sbjct: 133 WAATQVSHMAMVNCISLNSTSRVALTSSRNAFTMVANLGLYAIALVVFGVIKAGSKEDTE 192

Query: 196 LQYRWIAYVSIFVGCCFLVVFYAGTKEPTLQSGSDCKKSARISWGYWFKKALYYQVALLY 255
            QYRWIAY SI +GCCF+V+F  GTKEP L+        ARI W YWF+K LYYQVA++Y
Sbjct: 193 TQYRWIAYSSITIGCCFVVIFLMGTKEPRLRIDLKETSRARIPWVYWFRKILYYQVAMVY 252

Query: 256 MLARLITNVSQSLIAFYVTRDLKMNEYSKAIIPAIIFCCSFLVSVVLQEIKWNSRRLKSL 315
           +L RL+ NVSQ+ +AF+V  DL+M++ +KA++PAII+ CSF+VSV+LQEI WN +RLK+ 
Sbjct: 253 LLTRLVLNVSQAYLAFFVIDDLQMDQSAKALVPAIIYICSFVVSVLLQEIPWNGKRLKAY 312

Query: 316 LTIGAILWVIAGAAVFVLPSQMHNLMYPLAMVIGAANALVMVTTIGLESALVGDDLNGCA 375
            T G I+W+  GAA+ +LP  + + MY +++ IG ANAL+MVT I ++S LVG ++ GCA
Sbjct: 313 YTAGGIIWIFCGAAILLLPRDISSFMYAISVFIGIANALMMVTAISMQSVLVGAEVGGCA 372

Query: 376 FVYGSLSFLDKMSCGIALFVLESYEDSISCGE----TRGLY-TVSRFGTGLIPSCFAVFA 430
           FV GSLSFLDKMSCG+AL+VL+S++ +   G+     + +Y +V+R+G GL+P+  +   
Sbjct: 373 FVCGSLSFLDKMSCGLALYVLQSHQTTSPRGQLNNNQQSVYLSVTRYGLGLVPALCSFVG 432

Query: 431 LLVTSTLKLQ 440
           + VT  ++L+
Sbjct: 433 VAVTFFMELE 442



>AT2G44280.1 | chr2:18301563-18303927 REVERSE LENGTH=463
          Length = 462

 Score =  529 bits (1363), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 256/440 (58%), Positives = 332/440 (75%), Gaps = 4/440 (0%)

Query: 7   DEVLAEGQMPLGRWPILSYGVGHMLNDITSACWFTYLLLFLQEIGLAPRDAAIVMLSGQV 66
           +E       PLGR  +  YGVGHMLNDIT++CWFTYLLLFL +IGL+PRDAAIVMLSGQV
Sbjct: 11  EEEEDPSTKPLGRLSVFYYGVGHMLNDITASCWFTYLLLFLTQIGLSPRDAAIVMLSGQV 70

Query: 67  ADGLMTILAGEMIDRFGHFKLWHIGGSILVGISFSSVFGGCLLCTVLGTDSYLVRTIGYS 126
           ADG  TI  GE+IDRFGHFK+WH  GS+LV ISFSSVFGGCL C++L  +S  + T+ YS
Sbjct: 71  ADGFATIFIGELIDRFGHFKIWHAAGSLLVAISFSSVFGGCLPCSLLHNNSSTIETLSYS 130

Query: 127 FFAAVFNIGWAATQVSHMSMVNCMTLNSTSRVALASCRNAFTMVANLGLYAIALVVFALV 186
            FAA+FNIGWAATQVSHM+MVNC+TLNSTSRVAL S RNAF+MVANLGLYAIALVVF + 
Sbjct: 131 MFAAIFNIGWAATQVSHMAMVNCITLNSTSRVALTSSRNAFSMVANLGLYAIALVVFGVS 190

Query: 187 SAKACSDIVLQYRWIAYVSIFVGCCFLVVFYAGTKEPTLQSGSDCKKSARISWGYWFKKA 246
            A    +   QYRWIAY SI VGCCF+V+F  GTKEP L+        ARI W YWF+K 
Sbjct: 191 EAVTKENTESQYRWIAYSSITVGCCFVVIFLMGTKEPRLRINLRETSRARIPWSYWFRKI 250

Query: 247 LYYQVALLYMLARLITNVSQSLIAFYVTRDLKMNEYSKAIIPAIIFCCSFLVSVVLQEIK 306
           LYYQVA++Y+L RL+ NVSQ+ +AF+V  DL+M + +KA+IPAII+ CSF+VSV+LQEI 
Sbjct: 251 LYYQVAMVYLLTRLVLNVSQAYLAFFVIDDLQMAQSAKALIPAIIYVCSFVVSVMLQEIP 310

Query: 307 WNSRRLKSLLTIGAILWVIAGAAVFVLPSQMHNLMYPLAMVIGAANALVMVTTIGLESAL 366
           WN +RLK+    G I+W+  G ++ +LP  +++ MY +++ IG ANA+++VT+I ++S L
Sbjct: 311 WNGKRLKAYYCAGGIIWIFCGISILLLPRSINSYMYAISVFIGIANAVMLVTSISMQSVL 370

Query: 367 VGDDLNGCAFVYGSLSFLDKMSCGIALFVLESYEDS---ISCGETRGLY-TVSRFGTGLI 422
           +G  L GCAFV GSLSFLDKMSCG+AL+VL+S++ +   +        Y +V+R+G GL+
Sbjct: 371 IGSKLGGCAFVCGSLSFLDKMSCGLALYVLQSHQGTSPKVDVNIKEYFYFSVTRYGLGLV 430

Query: 423 PSCFAVFALLVTSTLKLQDT 442
           P+  ++  ++VT  ++L  T
Sbjct: 431 PAVCSLVGVVVTYFMELDST 450



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.328    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,536,226
Number of extensions: 325039
Number of successful extensions: 976
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 974
Number of HSP's successfully gapped: 2
Length of query: 457
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 355
Effective length of database: 8,310,137
Effective search space: 2950098635
Effective search space used: 2950098635
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 113 (48.1 bits)