BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0162200 Os03g0162200|AK121533
(138 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54560.1 | chr3:20196532-20197466 FORWARD LENGTH=137 209 3e-55
AT1G52740.1 | chr1:19645409-19646221 FORWARD LENGTH=135 204 2e-53
AT2G38810.1 | chr2:16219444-16220679 REVERSE LENGTH=137 203 2e-53
AT4G13570.2 | chr4:7884582-7885664 FORWARD LENGTH=125 146 3e-36
AT1G08880.1 | chr1:2847144-2847676 REVERSE LENGTH=143 127 2e-30
AT1G54690.1 | chr1:20414607-20415206 REVERSE LENGTH=143 126 4e-30
AT4G27230.1 | chr4:13637515-13638325 REVERSE LENGTH=132 124 1e-29
AT5G54640.1 | chr5:22196540-22197279 FORWARD LENGTH=131 124 1e-29
AT3G20670.1 | chr3:7229472-7229963 FORWARD LENGTH=133 123 3e-29
AT1G51060.1 | chr1:18926948-18927443 FORWARD LENGTH=133 123 4e-29
AT5G59870.1 | chr5:24115605-24116144 REVERSE LENGTH=151 119 5e-28
AT5G27670.1 | chr5:9792807-9793365 REVERSE LENGTH=151 117 1e-27
AT5G02560.2 | chr5:575437-576456 FORWARD LENGTH=178 112 7e-26
>AT3G54560.1 | chr3:20196532-20197466 FORWARD LENGTH=137
Length = 136
Score = 209 bits (533), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/109 (92%), Positives = 108/109 (99%)
Query: 30 PVSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKD 89
P+SRS+RAG+QFPVGRIHRQLK+R SAHGRVGATAAVY+A+ILEYLTAEVLELAGNASKD
Sbjct: 28 PISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKD 87
Query: 90 LKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 138
LKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKT+KE
Sbjct: 88 LKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 136
>AT1G52740.1 | chr1:19645409-19646221 FORWARD LENGTH=135
Length = 134
Score = 204 bits (518), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/109 (89%), Positives = 108/109 (99%)
Query: 30 PVSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKD 89
P++RSSRAGLQFPVGR+HR LK+R++AHGRVGATAAVY+AAILEYLTAEVLELAGNASKD
Sbjct: 26 PITRSSRAGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKD 85
Query: 90 LKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 138
LKVKRI+PRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK++KE
Sbjct: 86 LKVKRISPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSAKE 134
>AT2G38810.1 | chr2:16219444-16220679 REVERSE LENGTH=137
Length = 136
Score = 203 bits (517), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/108 (90%), Positives = 105/108 (97%)
Query: 31 VSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDL 90
+SRSSRAG+QFPVGRIHRQLK R SAHGRVGATAAVY+A+ILEYLTAEVLELAGNASKDL
Sbjct: 29 ISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDL 88
Query: 91 KVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 138
KVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSL+NK +K+
Sbjct: 89 KVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLVNKVTKD 136
>AT4G13570.2 | chr4:7884582-7885664 FORWARD LENGTH=125
Length = 124
Score = 146 bits (369), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 76/90 (84%)
Query: 39 LQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPR 98
++F V RIH+QLK+R SAH VGAT VY +ILEYLT EVL+LA N SKDLKVKRITPR
Sbjct: 35 IRFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPR 94
Query: 99 HLQLAIRGDEELDTLIKGTIAGGGVIPHIH 128
HLQLAIRGDEELDTLIKGTI GG VIPHIH
Sbjct: 95 HLQLAIRGDEELDTLIKGTIIGGSVIPHIH 124
>AT1G08880.1 | chr1:2847144-2847676 REVERSE LENGTH=143
Length = 142
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
Query: 31 VSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDL 90
VSRSS+AGLQFPVGRI R LKS A RVGA A VY +A+LEYL AEVLELAGNA++D
Sbjct: 23 VSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDN 81
Query: 91 KVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLI 132
K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+
Sbjct: 82 KKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL 124
>AT1G54690.1 | chr1:20414607-20415206 REVERSE LENGTH=143
Length = 142
Score = 126 bits (316), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/103 (65%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
Query: 31 VSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDL 90
VSRSS+AGLQFPVGRI R LK+ A RVGA A VY +A+LEYL AEVLELAGNA++D
Sbjct: 23 VSRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDN 81
Query: 91 KVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLI 132
K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+
Sbjct: 82 KKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL 124
>AT4G27230.1 | chr4:13637515-13638325 REVERSE LENGTH=132
Length = 131
Score = 124 bits (311), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 80/107 (74%), Gaps = 2/107 (1%)
Query: 31 VSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDL 90
SRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D
Sbjct: 17 TSRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDN 75
Query: 91 KVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTS 136
K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K +
Sbjct: 76 KKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122
>AT5G54640.1 | chr5:22196540-22197279 FORWARD LENGTH=131
Length = 130
Score = 124 bits (311), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 80/106 (75%), Gaps = 2/106 (1%)
Query: 32 SRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 91
SRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 18 SRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Query: 92 VKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTS 136
RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K +
Sbjct: 77 KTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122
>AT3G20670.1 | chr3:7229472-7229963 FORWARD LENGTH=133
Length = 132
Score = 123 bits (309), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 79/104 (75%), Gaps = 2/104 (1%)
Query: 32 SRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLK 91
SRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K
Sbjct: 18 SRSSKAGLQFPVGRIARFLKNGKYAT-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNK 76
Query: 92 VKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 134
RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K
Sbjct: 77 KTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPK 120
>AT1G51060.1 | chr1:18926948-18927443 FORWARD LENGTH=133
Length = 132
Score = 123 bits (308), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 79/107 (73%), Gaps = 2/107 (1%)
Query: 31 VSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDL 90
+RSS+AGLQFPVGRI R LK A RVGA A VY AA+LEYL AEVLELAGNA++D
Sbjct: 17 TTRSSKAGLQFPVGRIARFLKKGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDN 75
Query: 91 KVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTS 136
K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K +
Sbjct: 76 KKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122
>AT5G59870.1 | chr5:24115605-24116144 REVERSE LENGTH=151
Length = 150
Score = 119 bits (298), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 78/107 (72%), Gaps = 2/107 (1%)
Query: 31 VSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDL 90
VS+S +AGLQFPVGRI R LK A R+G A VY AA+LEYL AEVLELAGNA++D
Sbjct: 25 VSKSMKAGLQFPVGRITRFLKKGRYAQ-RLGGGAPVYMAAVLEYLAAEVLELAGNAARDN 83
Query: 91 KVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTS 136
K RI PRHL LAIR DEEL L+ G TIA GGV+P+I+ L+ K S
Sbjct: 84 KKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKS 130
>AT5G27670.1 | chr5:9792807-9793365 REVERSE LENGTH=151
Length = 150
Score = 117 bits (294), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 78/107 (72%), Gaps = 2/107 (1%)
Query: 31 VSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDL 90
VS+S +AGLQFPVGRI R LK A R G+ A VY AA+LEYL AEVLELAGNA++D
Sbjct: 26 VSKSVKAGLQFPVGRIARYLKKGRYAL-RYGSGAPVYLAAVLEYLAAEVLELAGNAARDN 84
Query: 91 KVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTS 136
K RI PRHL LAIR DEEL L+ G TIA GGV+P+I+ L+ K S
Sbjct: 85 KKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKS 131
>AT5G02560.2 | chr5:575437-576456 FORWARD LENGTH=178
Length = 177
Score = 112 bits (279), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 83/134 (61%), Gaps = 26/134 (19%)
Query: 30 PVSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAE----------- 78
PVSRS ++GLQFPVGRI R LK + RVG A VY AA+LEYL AE
Sbjct: 24 PVSRSVKSGLQFPVGRIGRYLK-KGRYSKRVGTGAPVYLAAVLEYLAAENSCGFCSVASL 82
Query: 79 -------------VLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVI 124
VLELAGNA++D K RI PRH+ LA+R DEEL TL+KG TIA GGV+
Sbjct: 83 TIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVL 142
Query: 125 PHIHKSLINKTSKE 138
P+I+ L+ K S++
Sbjct: 143 PNINPILLPKKSEK 156
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.132 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,000,272
Number of extensions: 64498
Number of successful extensions: 181
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 162
Number of HSP's successfully gapped: 13
Length of query: 138
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 50
Effective length of database: 8,693,961
Effective search space: 434698050
Effective search space used: 434698050
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 106 (45.4 bits)