BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0157300 Os03g0157300|AK103362
(418 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35920.1 | chr4:17012106-17014192 REVERSE LENGTH=422 590 e-169
AT2G17780.1 | chr2:7725155-7726952 REVERSE LENGTH=417 491 e-139
AT1G49030.1 | chr1:18136794-18137846 FORWARD LENGTH=225 61 1e-09
AT1G14870.1 | chr1:5128591-5129458 REVERSE LENGTH=153 59 5e-09
AT5G35525.1 | chr5:13707084-13707818 FORWARD LENGTH=153 59 5e-09
AT3G18460.1 | chr3:6333048-6333948 REVERSE LENGTH=185 57 1e-08
AT1G52200.1 | chr1:19442271-19443407 REVERSE LENGTH=191 56 3e-08
AT1G14880.1 | chr1:5132791-5133663 REVERSE LENGTH=152 53 4e-07
AT3G18470.1 | chr3:6335000-6335698 REVERSE LENGTH=134 53 4e-07
AT3G18450.1 | chr3:6331229-6332118 REVERSE LENGTH=185 52 4e-07
AT1G68630.1 | chr1:25768653-25769458 FORWARD LENGTH=162 49 7e-06
>AT4G35920.1 | chr4:17012106-17014192 REVERSE LENGTH=422
Length = 421
Score = 590 bits (1522), Expect = e-169, Method: Compositional matrix adjust.
Identities = 286/422 (67%), Positives = 345/422 (81%), Gaps = 10/422 (2%)
Query: 3 SWENLGDVATVVQLTGLDAVRLISMIVKAASTARLHKRNCRRFAQHLKLIGGLLEQLRVS 62
SW+ LG++A+V QLTGLDAV+LI +IVKAA+TA +HK+NCR+FAQHLKLIG LLEQL++S
Sbjct: 4 SWDGLGEIASVAQLTGLDAVKLIGLIVKAANTAWMHKKNCRQFAQHLKLIGNLLEQLKIS 63
Query: 63 ELKKYPETREPLEQLEDALRRAYLLVHSCQDRSYLYLLAMGWNIVYQFRKAQNEIDNYLR 122
E+KKYPETREPLE LEDALRR+YLLV+SC+DRSYLYLLAMGWNIVYQFRK Q+EID +L+
Sbjct: 64 EMKKYPETREPLEGLEDALRRSYLLVNSCRDRSYLYLLAMGWNIVYQFRKHQDEIDRFLK 123
Query: 123 LVPLITLVDNARVRERMEYIERDQCEYSFDDEDKEVQDALLNPDPSTNPTVVLKKTLSCS 182
++PLITLVDNAR+RER EYI+RDQ EY+ D+ED+ VQD +L + + VLKKTLSCS
Sbjct: 124 IIPLITLVDNARIRERFEYIDRDQREYTLDEEDRHVQDVILKQESTREAASVLKKTLSCS 183
Query: 183 YPNLPFNEALRKESEKLQVELQRSQSNMDMGQCEVIQHLLGVTKTVASSIP--EKCATPK 240
YPNL F EAL+ E+EKLQ+ELQRSQ + D+ QCEVIQ L+GVT+ A+ P EK T K
Sbjct: 184 YPNLRFCEALKTENEKLQIELQRSQEHYDVAQCEVIQRLIGVTQAAAAVEPDSEKELTKK 243
Query: 241 VSEKADSNHTKVSEDSAKTYHDDSPKKQKDACTAPRSSPPSSYGHDLVSSRGS---YSDE 297
S+K++ + + +E S Y +DSPKK A RS+ S GHDL+S R S + +E
Sbjct: 244 ASKKSERSSSMKTEYS---YDEDSPKKSSTR-AASRSTSNVSSGHDLLSRRASQAQHHEE 299
Query: 298 WHADLLGCCSEPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACNDIMAYSLILSCCCYT 357
WH DLL CCSEPSLC +TFFFPCGT +KIA+ A NR +SS+EACN++MAYSLILSCCCYT
Sbjct: 300 WHTDLLACCSEPSLCFKTFFFPCGTLAKIATAASNRHISSAEACNELMAYSLILSCCCYT 359
Query: 358 CCVRRKLRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEIRGAYG-ERTKISPPSFQYM 416
CCVRRKLR+ LNI GG IDDFLSH+MCCCCALVQE REVEIRGAYG E+TKISPPS Q+M
Sbjct: 360 CCVRRKLRKTLNITGGFIDDFLSHVMCCCCALVQELREVEIRGAYGTEKTKISPPSSQFM 419
Query: 417 EH 418
EH
Sbjct: 420 EH 421
>AT2G17780.1 | chr2:7725155-7726952 REVERSE LENGTH=417
Length = 416
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/421 (57%), Positives = 316/421 (75%), Gaps = 15/421 (3%)
Query: 3 SWENLGDVATVVQLTGLDAVRLISMIVKAASTARLHKRNCRRFAQHLKLIGGLLEQLRVS 62
SW+ LG++A+V QLTG+DA++LI MIV AA+TAR+HK+NCR+FA HLKLI LLEQ++ S
Sbjct: 4 SWDQLGEIASVAQLTGIDALKLIGMIVNAANTARMHKKNCRQFAHHLKLIRNLLEQIKNS 63
Query: 63 ELKKYPETREPLEQLEDALRRAYLLVHSCQDRSYLYLLAMGWNIVYQFRKAQNEIDNYLR 122
E+ + E EPL+ L+DALRR+Y+LV SCQ++SYLYLLAMGWNIV QF KAQNEID +L+
Sbjct: 64 EMNQRSEILEPLQGLDDALRRSYILVKSCQEKSYLYLLAMGWNIVNQFEKAQNEIDLFLK 123
Query: 123 LVPLITLVDNARVRERMEYIERDQCEYSFDDEDKEVQDALLNPDPSTN-PTVVLKKTLSC 181
+VPLI + DNAR+RER+E IERDQ EY+ D+ED++VQD +L + + T VLKKTLS
Sbjct: 124 IVPLINMADNARIRERLEAIERDQREYTLDEEDRKVQDVILKQESTREAATSVLKKTLSR 183
Query: 182 SYPNLPFNEALRKESEKLQVELQRSQSNMDMGQCEVIQHLLGVTKTVASSIPEKCATPKV 241
SYPN+ F EAL+ E EKLQ+ELQRS++ D QCEVIQ L+ VT+T A+ P +
Sbjct: 184 SYPNMGFCEALKTEEEKLQLELQRSRARYDADQCEVIQRLIDVTQTAATVEPN--LEKVL 241
Query: 242 SEKADSNHTKVSEDSAKTYHDDSPKKQKDACTAPRSSPPSSYGHDLVSSRG-SYSDEWHA 300
++K + +K +D Y DS + D+ RS+ S GH+L+S R + WHA
Sbjct: 242 TKKEELTSSKKRDD---LYDTDSSSIRADS----RSTSYVSSGHELLSGRSLQHRGNWHA 294
Query: 301 DLLGCCSEPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACNDIMAYSLILSCCCYTCCV 360
DLL CCSEP LCL+T FFPCGT +KI+++A +R +SS+E C +++ YSLILSCCCYTCC+
Sbjct: 295 DLLDCCSEPCLCLKTLFFPCGTLAKISTVATSRQISSTEVCKNLIVYSLILSCCCYTCCI 354
Query: 361 RRKLRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEI-RGAYG---ERTKISPPSFQYM 416
R+KLR+ LNI GGCIDDFLSHLMCCCCALVQE REVEI R +YG ++SPP+ Q+M
Sbjct: 355 RKKLRKTLNITGGCIDDFLSHLMCCCCALVQELREVEIHRASYGTEKSNKEMSPPTPQFM 414
Query: 417 E 417
E
Sbjct: 415 E 415
>AT1G49030.1 | chr1:18136794-18137846 FORWARD LENGTH=225
Length = 224
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 283 YGHDLVSSRGSYSDEWHADLLGCCSEPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACN 342
YG + + W + L C ++ L T FP TF +IA + S A
Sbjct: 73 YGVSMAGPVHTQPSNWTSGLFDCMNDGENALITCCFPFVTFGQIAEVIDEGATSCGTAG- 131
Query: 343 DIMAYSLILSC----CCYTCCVRRKLRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEI 398
M Y LI C YTC R KLR K + D+++H C CAL QE+RE++
Sbjct: 132 --MLYGLICCLFAIPCVYTCTFRTKLRSKYGLPDAPAPDWITHCFCEYCALCQEYRELKN 189
Query: 399 RG 400
RG
Sbjct: 190 RG 191
>AT1G14870.1 | chr1:5128591-5129458 REVERSE LENGTH=153
Length = 152
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 296 DEWHADLLGCCSEPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACNDIMAYSLILSCCC 355
EW C S+ C TF+ PC TF ++A I S A +++ C C
Sbjct: 14 GEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCAC 73
Query: 356 -YTCCVRRKLRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEIRG 400
Y+C R K+R + NI G D L H C C+L Q++RE++ RG
Sbjct: 74 IYSCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRG 119
>AT5G35525.1 | chr5:13707084-13707818 FORWARD LENGTH=153
Length = 152
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 296 DEWHADLLGCCSEPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACNDIMAYSLILSC-C 354
EW C S+ C T+ PC TF ++A I S A + + I C C
Sbjct: 14 GEWSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRGNTSCGTAGALYVLLAAITGCGC 73
Query: 355 CYTCCVRRKLRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEIRG 400
Y+C R K+R + NI G D L H C CAL QE+RE++ RG
Sbjct: 74 LYSCIYRGKIRAQYNIRGDGCTDCLKHFCCELCALTQEYRELKHRG 119
>AT3G18460.1 | chr3:6333048-6333948 REVERSE LENGTH=185
Length = 184
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 298 WHADLLGCCSEPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACNDIMAYSLILSCCC-- 355
W +DL C ++ + T PC T +IA I ++ + Y +I
Sbjct: 54 WSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDE---GATPCATGGLLYGMIFFIGVPF 110
Query: 356 -YTCCVRRKLRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEIRG----------AYGE 404
Y+C R K+R K + D+++HL C CAL QE+RE++ RG +
Sbjct: 111 VYSCMFRAKMRNKYGLPDAPAPDWITHLFCEHCALCQEYRELKHRGFDPNIGWAGNVQAQ 170
Query: 405 RTKISPPSFQYM 416
+ +SPP+ Q M
Sbjct: 171 QPVMSPPTGQRM 182
>AT1G52200.1 | chr1:19442271-19443407 REVERSE LENGTH=191
Length = 190
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 250 TKVSEDSAKTYHDDSPKKQKDACTAPRS--SPPSSYGHDLVSSRGSYSDEWHADLLGCCS 307
T EDS P P S +PP+ ++ S G W L C +
Sbjct: 6 TPSEEDSNNGLPVQQPGTPNQRTRVPVSQFAPPNYQQANVNLSVGR---PWSTGLFDCQA 62
Query: 308 EPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACNDIMAYSLILSCCCYTCCV----RRK 363
+ + + T PC TF +IA + M+ Y L++ C + R K
Sbjct: 63 DQANAVLTTIVPCVTFGQIAEVMDEGEMTCPLG---TFMYLLMMPALCSHWVMGSKYREK 119
Query: 364 LRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEIR 399
+R+K N+ D SH++C CC+L QE+RE++IR
Sbjct: 120 MRRKFNLVEAPYSDCASHVLCPCCSLCQEYRELKIR 155
>AT1G14880.1 | chr1:5132791-5133663 REVERSE LENGTH=152
Length = 151
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 296 DEWHADLLGCCSEPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACNDIMAYSLILSCC- 354
EW C S+ C T PC TF ++A I S A M LI SC
Sbjct: 13 GEWSTGFCDCFSDCRNCCITLCCPCITFGQVAEIVDRGSKSCCAAGALYMLIDLITSCGR 72
Query: 355 CYTCCVRRKLRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEIRG 400
Y C K+R + NI G D L H C CAL Q++RE++ RG
Sbjct: 73 MYACFYSGKMRAQYNIKGDGCTDCLKHFCCNLCALTQQYRELKHRG 118
>AT3G18470.1 | chr3:6335000-6335698 REVERSE LENGTH=134
Length = 133
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 297 EWHADLLGCCSEPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACNDIMAYSLILSC--- 353
+W + L C + T F PC TF +IA I+ C + ++ C
Sbjct: 4 QWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDE----GRTGCGRCGVFYGLICCVVG 59
Query: 354 --CCYTCCVRRKLRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEIRG 400
C ++C R K+R K + D ++H C CCAL QE RE++ RG
Sbjct: 60 LPCLFSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRG 108
>AT3G18450.1 | chr3:6331229-6332118 REVERSE LENGTH=185
Length = 184
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 296 DEWHADLLGCCSEPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACNDIMAYSLILSCCC 355
++W + L C ++ + T PC TF +IA I + A A +
Sbjct: 50 NQWSSQLFDCMNDSENAVITLIAPCVTFGQIAEIVDEGATPCATAGLLYGALFFTGASFV 109
Query: 356 YTCCVRRKLRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEIRG 400
Y+ R ++R+K + D+++HL+C AL QE+RE++ G
Sbjct: 110 YSYMFRARIRKKFGLPDAPAPDWITHLVCMPFALCQEYRELKHHG 154
>AT1G68630.1 | chr1:25768653-25769458 FORWARD LENGTH=162
Length = 161
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 298 WHADLLGCCSEPSLCLRTFFFPCGTFSKIASIAKNRPMSSSEACNDIMAYSLILSCCCYT 357
W L C + +C++T PC +F++ I + A +A I Y
Sbjct: 29 WTTGLCDCHEDAHICVQTAIMPCVSFAQNVEIVNRGTIPCMNAGLIHLALGFIGCSWLYA 88
Query: 358 CCVRRKLRQKLNIAGGCIDDFLSHLMCCCCALVQEWREVEIRGA-----------YGERT 406
R +LR+ + DFL HL C CA+ QE RE++ RGA R
Sbjct: 89 FPNRSRLREHFALPEEPCRDFLVHLFCTPCAICQESRELKNRGADPSIGWLSNVEKWSRE 148
Query: 407 KISPP 411
K++PP
Sbjct: 149 KVTPP 153
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.133 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,380,775
Number of extensions: 402491
Number of successful extensions: 1371
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 1359
Number of HSP's successfully gapped: 14
Length of query: 418
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 317
Effective length of database: 8,337,553
Effective search space: 2643004301
Effective search space used: 2643004301
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)