BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0145200 Os03g0145200|J090048J08
(219 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54810.2 | chr3:20296957-20298236 FORWARD LENGTH=323 120 4e-28
AT1G08010.1 | chr1:2486202-2487402 REVERSE LENGTH=304 117 3e-27
AT1G08000.1 | chr1:2483460-2484564 REVERSE LENGTH=309 117 4e-27
AT3G24050.1 | chr3:8686060-8687462 FORWARD LENGTH=275 117 7e-27
AT3G60530.1 | chr3:22373348-22374147 FORWARD LENGTH=241 116 7e-27
AT2G45050.1 | chr2:18582958-18583845 FORWARD LENGTH=265 115 1e-26
AT5G25830.1 | chr5:9004398-9005502 REVERSE LENGTH=332 115 1e-26
AT4G32890.1 | chr4:15875598-15876615 FORWARD LENGTH=309 115 2e-26
AT4G36240.1 | chr4:17147376-17148211 REVERSE LENGTH=239 113 8e-26
AT5G66320.1 | chr5:26496208-26497309 REVERSE LENGTH=340 112 2e-25
AT4G34680.1 | chr4:16553700-16554610 FORWARD LENGTH=270 110 4e-25
AT3G51080.1 | chr3:18973639-18974668 FORWARD LENGTH=313 108 2e-24
AT2G28340.1 | chr2:12103672-12106172 FORWARD LENGTH=292 102 1e-22
AT3G45170.1 | chr3:16537538-16538232 FORWARD LENGTH=205 99 2e-21
AT2G18380.1 | chr2:7982868-7984017 REVERSE LENGTH=209 52 2e-07
AT4G36620.1 | chr4:17268906-17269662 REVERSE LENGTH=212 52 3e-07
AT5G26930.1 | chr5:9479592-9480061 FORWARD LENGTH=121 51 4e-07
AT3G50870.1 | chr3:18911112-18912369 FORWARD LENGTH=296 51 5e-07
AT3G06740.1 | chr3:2126658-2127265 FORWARD LENGTH=150 50 6e-07
AT5G49300.1 | chr5:19984849-19985475 REVERSE LENGTH=140 50 1e-06
AT4G26150.1 | chr4:13253210-13254659 FORWARD LENGTH=353 50 1e-06
AT5G56860.1 | chr5:22989630-22991351 REVERSE LENGTH=399 49 2e-06
AT3G21175.1 | chr3:7422832-7424598 FORWARD LENGTH=298 48 4e-06
AT4G16141.1 | chr4:9131872-9132893 REVERSE LENGTH=198 48 4e-06
AT4G24470.3 | chr4:12645785-12647734 FORWARD LENGTH=318 47 6e-06
AT1G51600.1 | chr1:19133176-19135252 FORWARD LENGTH=303 47 9e-06
AT3G16870.1 | chr3:5763752-5764576 REVERSE LENGTH=191 47 1e-05
>AT3G54810.2 | chr3:20296957-20298236 FORWARD LENGTH=323
Length = 322
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 61/77 (79%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
C HC V +TPQWRLGP GP+TLCNACGVR+KSGRLFPEYRPA SPTF+P LHSNSH++V
Sbjct: 231 CMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNSHKKVA 290
Query: 184 EMRLQSEEDASAASRVN 200
EMR + D S + N
Sbjct: 291 EMRNKRCSDGSYITEEN 307
>AT1G08010.1 | chr1:2486202-2487402 REVERSE LENGTH=304
Length = 303
Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 58/68 (85%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
CTHC +TPQWR GP GP+TLCNACGVRF+SGRL PEYRPA+SPTF P +HSNSHR+++
Sbjct: 222 CTHCETTKTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHRKII 281
Query: 184 EMRLQSEE 191
EMR + +E
Sbjct: 282 EMRRKDDE 289
>AT1G08000.1 | chr1:2483460-2484564 REVERSE LENGTH=309
Length = 308
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 57/68 (83%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
CTHC TPQWR GP GP+TLCNACGVRFKSGRL PEYRPA+SPTF P +HSNSHR+++
Sbjct: 220 CTHCETITTPQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPASSPTFIPSVHSNSHRKII 279
Query: 184 EMRLQSEE 191
EMR + +E
Sbjct: 280 EMRKKDDE 287
>AT3G24050.1 | chr3:8686060-8687462 FORWARD LENGTH=275
Length = 274
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 57/67 (85%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
C HC ++TPQWR GP GP+TLCNACGVR+KSGRL PEYRPANSPTF+ LHSNSHR+++
Sbjct: 196 CQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRKIV 255
Query: 184 EMRLQSE 190
EMR Q +
Sbjct: 256 EMRKQYQ 262
>AT3G60530.1 | chr3:22373348-22374147 FORWARD LENGTH=241
Length = 240
Score = 116 bits (291), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 59/71 (83%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
CTHCA ++TPQWR GP GP+TLCNACGVR+KSGRL PEYRPA+SPTF HSNSHR+VM
Sbjct: 160 CTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHRKVM 219
Query: 184 EMRLQSEEDAS 194
E+R Q E+ S
Sbjct: 220 ELRRQKEQQES 230
>AT2G45050.1 | chr2:18582958-18583845 FORWARD LENGTH=265
Length = 264
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 57/67 (85%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
CTHCA ++TPQWR GP GP+TLCNACGVRFKSGRL PEYRPA+SPTF HSNSHR+VM
Sbjct: 181 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRKVM 240
Query: 184 EMRLQSE 190
E+R Q E
Sbjct: 241 ELRRQKE 247
>AT5G25830.1 | chr5:9004398-9005502 REVERSE LENGTH=332
Length = 331
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 55/67 (82%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
C HCA D+TPQWR GP GP+TLCNACGVR+KSGRL PEYRPA SPTF HSNSHR+VM
Sbjct: 221 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRKVM 280
Query: 184 EMRLQSE 190
E+R Q E
Sbjct: 281 ELRRQKE 287
>AT4G32890.1 | chr4:15875598-15876615 FORWARD LENGTH=309
Length = 308
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 56/67 (83%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
C HCA ++TPQWR GP GP+TLCNACGVR+KSGRL PEYRPA+SPTF HSNSHR+VM
Sbjct: 199 CLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVMARHSNSHRKVM 258
Query: 184 EMRLQSE 190
E+R Q E
Sbjct: 259 ELRRQKE 265
>AT4G36240.1 | chr4:17147376-17148211 REVERSE LENGTH=239
Length = 238
Score = 113 bits (282), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 57/69 (82%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
C+HC V +TPQWR+GP G +TLCNACGVRFKSGRL PEYRPA SPTF+ +HSNSHR+V+
Sbjct: 166 CSHCGVQKTPQWRMGPLGAKTLCNACGVRFKSGRLLPEYRPACSPTFTNEIHSNSHRKVL 225
Query: 184 EMRLQSEED 192
E+RL D
Sbjct: 226 ELRLMKVAD 234
>AT5G66320.1 | chr5:26496208-26497309 REVERSE LENGTH=340
Length = 339
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 59/77 (76%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
C+HC V +TPQWR GP G +TLCNACGVR+KSGRL PEYRPA SPTFS LHSN HR+V+
Sbjct: 251 CSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVI 310
Query: 184 EMRLQSEEDASAASRVN 200
EMR + E + + +N
Sbjct: 311 EMRRKKEPTSDNETGLN 327
>AT4G34680.1 | chr4:16553700-16554610 FORWARD LENGTH=270
Length = 269
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 55/67 (82%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
C+HC + TPQWR GP GP+TLCNACGVRFKSGRL PEYRPA+SPTFS +HSN HR+V+
Sbjct: 182 CSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPTFSNEIHSNLHRKVL 241
Query: 184 EMRLQSE 190
E+R E
Sbjct: 242 ELRKSKE 248
>AT3G51080.1 | chr3:18973639-18974668 FORWARD LENGTH=313
Length = 312
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 53/67 (79%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
C HC V +TPQWR GP G +TLCNACGVR+KSGRL PEYRPA SPTFS LHSN H +V+
Sbjct: 223 CGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHSKVI 282
Query: 184 EMRLQSE 190
EMR + E
Sbjct: 283 EMRRKKE 289
>AT2G28340.1 | chr2:12103672-12106172 FORWARD LENGTH=292
Length = 291
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
CTHC TPQWR GP+G +TLCNACG+RF+SGRL EYRPA SPTF P +HSN H++++
Sbjct: 193 CTHCETTTTPQWREGPNGRKTLCNACGIRFRSGRLVLEYRPAASPTFIPTVHSNLHKKII 252
Query: 184 EMRLQSEE 191
MR++ +
Sbjct: 253 YMRMKDND 260
>AT3G45170.1 | chr3:16537538-16538232 FORWARD LENGTH=205
Length = 204
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
C+HC +TP WR GP G TLCNACG+R+++GRL PEYRPA+SP F P +HSN HR+VM
Sbjct: 117 CSHCGTRKTPLWREGPRGAGTLCNACGMRYRTGRLLPEYRPASSPDFKPNVHSNFHRKVM 176
Query: 184 EMRLQ 188
E+R +
Sbjct: 177 EIRRE 181
>AT2G18380.1 | chr2:7982868-7984017 REVERSE LENGTH=209
Length = 208
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFK 154
C C TP WR GP GP++LCNACG+RFK
Sbjct: 94 CASCDTTSTPLWRNGPKGPKSLCNACGIRFK 124
>AT4G36620.1 | chr4:17268906-17269662 REVERSE LENGTH=212
Length = 211
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFK 154
C +C TP WR GP GP++LCNACG+RFK
Sbjct: 77 CANCDTTSTPLWRNGPRGPKSLCNACGIRFK 107
>AT5G26930.1 | chr5:9479592-9480061 FORWARD LENGTH=121
Length = 120
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGR 157
C+ C +TP WR GP GP++LCNACG+R + R
Sbjct: 28 CSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQR 61
>AT3G50870.1 | chr3:18911112-18912369 FORWARD LENGTH=296
Length = 295
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFK 154
C +C TP WR GP GP++LCNACG+RFK
Sbjct: 154 CANCDTTSTPLWRNGPRGPKSLCNACGIRFK 184
>AT3G06740.1 | chr3:2126658-2127265 FORWARD LENGTH=150
Length = 149
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLF-----PEYRPANSPTFSPLLHSNS 178
C C +TP WR GP GP++LCNACG+R + R E + S +P +
Sbjct: 43 CAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTLISNRSEDKKKKSHNRNPKFGDSL 102
Query: 179 HRRVMEM 185
+R+ME+
Sbjct: 103 KQRLMEL 109
>AT5G49300.1 | chr5:19984849-19985475 REVERSE LENGTH=140
Length = 139
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGR 157
C C +TP WR GP GP++LCNACG+R + R
Sbjct: 38 CADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR 71
>AT4G26150.1 | chr4:13253210-13254659 FORWARD LENGTH=353
Length = 352
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVR 152
C+ C +TP WR GP GP++LCNACG+R
Sbjct: 201 CSDCNTTKTPLWRSGPRGPKSLCNACGIR 229
>AT5G56860.1 | chr5:22989630-22991351 REVERSE LENGTH=399
Length = 398
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVR 152
C+ C +TP WR GP GP++LCNACG+R
Sbjct: 232 CSDCNTTKTPLWRSGPRGPKSLCNACGIR 260
>AT3G21175.1 | chr3:7422832-7424598 FORWARD LENGTH=298
Length = 297
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 124 CTHCAVDE--TPQWRLGPDGPRTLCNACGV 151
C HC E TP R GPDGPRTLCNACG+
Sbjct: 219 CRHCGTSEKSTPMMRRGPDGPRTLCNACGL 248
>AT4G16141.1 | chr4:9131872-9132893 REVERSE LENGTH=198
Length = 197
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGR 157
C C TP WR GP GP++LCNACG++ + R
Sbjct: 39 CVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKKR 72
>AT4G24470.3 | chr4:12645785-12647734 FORWARD LENGTH=318
Length = 317
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 124 CTHCAVDE--TPQWRLGPDGPRTLCNACGV 151
CTHC + TP R GP GPRTLCNACG+
Sbjct: 214 CTHCGISSKCTPMMRRGPSGPRTLCNACGL 243
>AT1G51600.1 | chr1:19133176-19135252 FORWARD LENGTH=303
Length = 302
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 124 CTHCAVDE--TPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPL 173
C HC + E TP R GP GPRTLCNACG+ + + F + A+ T L
Sbjct: 223 CRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNL 274
>AT3G16870.1 | chr3:5763752-5764576 REVERSE LENGTH=191
Length = 190
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGR 157
C C TP WR GP GP++LCNACG++ + R
Sbjct: 44 CVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKR 77
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.129 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,147,590
Number of extensions: 98749
Number of successful extensions: 208
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 208
Number of HSP's successfully gapped: 28
Length of query: 219
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 124
Effective length of database: 8,502,049
Effective search space: 1054254076
Effective search space used: 1054254076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)