BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0139500 Os03g0139500|AK071184
(388 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G04500.1 | chr1:1221757-1224235 REVERSE LENGTH=387 142 2e-34
AT2G33350.1 | chr2:14134116-14136836 FORWARD LENGTH=411 132 3e-31
AT5G41380.1 | chr5:16562129-16563553 REVERSE LENGTH=308 99 4e-21
AT1G63820.1 | chr1:23682529-23684050 REVERSE LENGTH=294 91 8e-19
AT3G12890.1 | chr3:4099223-4100277 FORWARD LENGTH=252 87 1e-17
AT4G27900.1 | chr4:13890858-13892777 FORWARD LENGTH=262 80 2e-15
AT5G53420.1 | chr5:21673683-21675469 FORWARD LENGTH=265 80 2e-15
AT5G59990.1 | chr5:24151206-24153084 REVERSE LENGTH=242 74 2e-13
AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295 60 2e-09
AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407 60 2e-09
AT1G07050.1 | chr1:2164327-2165133 REVERSE LENGTH=196 58 1e-08
AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356 58 1e-08
AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356 57 2e-08
AT5G61380.1 | chr5:24675540-24678176 FORWARD LENGTH=619 56 3e-08
AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348 55 6e-08
AT1G68520.1 | chr1:25709331-25710749 REVERSE LENGTH=407 54 1e-07
AT5G02810.1 | chr5:638283-641461 REVERSE LENGTH=728 54 2e-07
AT1G25440.1 | chr1:8933939-8935284 REVERSE LENGTH=418 54 2e-07
AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374 54 2e-07
AT1G28050.1 | chr1:9775768-9777657 REVERSE LENGTH=434 52 4e-07
AT1G73870.1 | chr1:27779214-27780522 FORWARD LENGTH=393 52 4e-07
AT5G14370.1 | chr5:4632147-4633651 REVERSE LENGTH=340 51 9e-07
AT5G57180.2 | chr5:23168393-23170763 FORWARD LENGTH=436 51 1e-06
AT3G21880.1 | chr3:7706748-7708093 FORWARD LENGTH=365 51 1e-06
AT3G21175.1 | chr3:7422832-7424598 FORWARD LENGTH=298 50 2e-06
AT2G47890.1 | chr2:19608245-19609476 FORWARD LENGTH=333 50 3e-06
AT2G46790.1 | chr2:19232874-19234901 FORWARD LENGTH=469 49 3e-06
AT1G49130.1 | chr1:18174741-18175936 REVERSE LENGTH=327 49 3e-06
>AT1G04500.1 | chr1:1221757-1224235 REVERSE LENGTH=387
Length = 386
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/143 (57%), Positives = 100/143 (69%), Gaps = 12/143 (8%)
Query: 251 ENTQHMVTGCNDSPLTLP--STEGSSLEDTPYKGV-RLTAEQRKEKISRYIKKRNERNFS 307
EN HMV P+ LP TE + L+D + V +L+AEQRKEKI RY+KKRNERNFS
Sbjct: 251 ENQNHMVA----QPV-LPQLGTEITGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFS 305
Query: 308 KKIKYACRKTLADSRPRVRGRFAKNDELCEATRSS-SQDFEQYEHVVGMKGEDML-DSSN 365
KKIKYACRKTLADSRPRVRGRFAKNDE E R + S E + VG+K E+ L DSS+
Sbjct: 306 KKIKYACRKTLADSRPRVRGRFAKNDEFGEPNRQACSSHHEDDDDDVGVKEEEQLVDSSD 365
Query: 366 ILAHLSGMNPYGYKYNSTVESWI 388
I +H+SG+N +K N ++SWI
Sbjct: 366 IFSHISGVN--SFKCNYPIQSWI 386
>AT2G33350.1 | chr2:14134116-14136836 FORWARD LENGTH=411
Length = 410
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 98/146 (67%), Gaps = 14/146 (9%)
Query: 250 GENTQHMVTGCNDSPLTLPS---TEGSSLEDTPYKGV-RLTAEQRKEKISRYIKKRNERN 305
EN H+VT P P+ + + LED+ V +L+ EQRKEKI RY+KKRNERN
Sbjct: 272 AENQSHLVT-----PQAHPALGPVDINGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERN 326
Query: 306 FSKKIKYACRKTLADSRPRVRGRFAKNDELCEATRSS--SQDFEQYEHVVGMKGEDML-D 362
F+KKIKYACRKTLADSRPRVRGRFAKNDE E R + S ++ E +G+K E+ L D
Sbjct: 327 FNKKIKYACRKTLADSRPRVRGRFAKNDEFGEPNRQAFSSHHDDEDEDDMGVKDEEQLVD 386
Query: 363 SSNILAHLSGMNPYGYKYNSTVESWI 388
SS+I AH+SG N +K N ++SWI
Sbjct: 387 SSDIFAHISGAN--SFKCNYPIQSWI 410
>AT5G41380.1 | chr5:16562129-16563553 REVERSE LENGTH=308
Length = 307
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 59/72 (81%), Gaps = 3/72 (4%)
Query: 269 STEGSSL---EDTPYKGVRLTAEQRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRV 325
S+E S++ E+ +K R +AE+RKEKIS+Y KRN+RNF+K IKYACRKTLADSRPR+
Sbjct: 191 SSENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRI 250
Query: 326 RGRFAKNDELCE 337
RGRFA+NDE+ E
Sbjct: 251 RGRFARNDEVVE 262
>AT1G63820.1 | chr1:23682529-23684050 REVERSE LENGTH=294
Length = 293
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 10/120 (8%)
Query: 224 GEGLTRTYSDTDSMHGAFNNAAEMQMGENTQHMVTGCNDSPLTLPSTEGSSLEDTPYKGV 283
+ + R YS G N G+ + SP T+ S + SL +
Sbjct: 136 SDHMRRVYST-----GDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSL-----RVG 185
Query: 284 RLTAEQRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELCEATRSSS 343
R ++E+RKEKIS+Y KR +RNF+K IKYACRKTLAD+RPRVRGRFA+NDE+ E + +S
Sbjct: 186 RYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEVFENPKIAS 245
>AT3G12890.1 | chr3:4099223-4100277 FORWARD LENGTH=252
Length = 251
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 12/110 (10%)
Query: 264 PLTLPST--------EGSSLEDTPYKGVRLTAEQRKEKISRYIKKRNERNFSKKIKYACR 315
PL P+T EG + K R + E+RK++I RY+KK+N+RNF+K IKY CR
Sbjct: 105 PLFRPATGEQSWGNSEGGIQAEPNTKVGRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCR 164
Query: 316 KTLADSRPRVRGRFAKNDELCEATRSSSQDFEQYEHVVGMKGEDMLDSSN 365
KTLAD R RVRGRFA+N++ CE S++ + K EDM S+
Sbjct: 165 KTLADRRVRVRGRFARNNDTCEEQPHMSKNHNNHSE----KEEDMFSGSD 210
>AT4G27900.1 | chr4:13890858-13892777 FORWARD LENGTH=262
Length = 261
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 45/53 (84%)
Query: 283 VRLTAEQRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEL 335
+ T+E R+EK+SRY K+++RNF +KIKYACRK LADS+PR+RGRFAK +E+
Sbjct: 207 ISCTSEDRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEEM 259
>AT5G53420.1 | chr5:21673683-21675469 FORWARD LENGTH=265
Length = 264
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 283 VRLTAEQRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDE 334
V T+E R+EK+SRY K++ RNF +KIKYACRK LADS+PRVRGRFAK +E
Sbjct: 211 VSCTSEDRREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 262
>AT5G59990.1 | chr5:24151206-24153084 REVERSE LENGTH=242
Length = 241
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 5/58 (8%)
Query: 297 YIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELCEATRSSSQDFEQYEHVVG 354
Y KRN RNF+K+IKY CRKTLADSRPR+RGRFA+NDE+ S + + E VVG
Sbjct: 170 YRSKRNLRNFNKRIKYECRKTLADSRPRIRGRFARNDEI-----SQQEQVDVMEAVVG 222
>AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 248 QMGEN--TQHMVTGCNDSPLTLPSTEGSSLE--DTPYKGVRLTAEQRKEKISRYIKKRNE 303
Q G N Q + T D PL +P + G + E +T V+L+ +R+ ++ RY +KR
Sbjct: 184 QQGFNFINQTVSTRTIDVPL-VPESGGVTAEMTNTETPAVQLSPAEREARVLRYREKRKN 242
Query: 304 RNFSKKIKYACRKTLADSRPRVRGRFAK 331
R F K I+YA RK A+ RPR++GRFAK
Sbjct: 243 RKFEKTIRYASRKAYAEMRPRIKGRFAK 270
>AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407
Length = 406
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 264 PLTLPSTEGSSLEDTPYKGVRLTAEQRKEKISRYIKKRNERNFSKKIKYACRKTLADSRP 323
P P+T G+ + + V LT+ +R+ ++ RY +KR R F K I+YA RK A+ RP
Sbjct: 315 PYGGPATSGA--DPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRP 372
Query: 324 RVRGRFAK 331
R++GRFAK
Sbjct: 373 RIKGRFAK 380
>AT1G07050.1 | chr1:2164327-2165133 REVERSE LENGTH=196
Length = 195
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 247 MQMGENTQHMVTGCNDSPLTLPSTEGSSLEDTPYKG-VRLTAEQRKEK----ISRYIKKR 301
+++ N Q ++ +D L T+ S+L+++ Y+G V + E+R + + RY +KR
Sbjct: 104 LKLNLNHQEVIDAWSDHQKPL-WTDTSTLDNSVYRGEVPVIEEKRNMRREASVLRYKEKR 162
Query: 302 NERNFSKKIKYACRKTLADSRPRVRGRFAKND 333
R FSKKI+Y RK AD RPR +GRF K +
Sbjct: 163 QSRLFSKKIRYQVRKLNADKRPRFKGRFVKRE 194
>AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356
Length = 355
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 290 RKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDE 334
R+ ++ RY +KR R F K I+YA RK A+SRPR++GRFAK E
Sbjct: 285 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTE 329
>AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356
Length = 355
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 261 NDSPLTLPSTEGSSLEDTPYKGVR-LTAEQRKEKISRYIKKRNERNFSKKIKYACRKTLA 319
+D+ ++ P + + + PY + L+ R+ ++ RY +K+ R F K I+YA RK A
Sbjct: 256 SDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYA 315
Query: 320 DSRPRVRGRFAKNDEL 335
+ RPR++GRFAK ++
Sbjct: 316 EKRPRIKGRFAKKKDV 331
>AT5G61380.1 | chr5:24675540-24678176 FORWARD LENGTH=619
Length = 618
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 249 MGENTQHMVTGCNDSPLTLPSTEGSSLEDTPYKGVRLTA-EQRKEKISRYIKKRNERNFS 307
M + QH + +++ S + P VR+ ++R+E + ++ +KRN+R F
Sbjct: 491 MNTSLQHSQMSLQNGQMSMVHHSWSPAGNPPSNEVRVNKLDRREEALLKFRRKRNQRCFD 550
Query: 308 KKIKYACRKTLADSRPRVRGRFAK 331
KKI+Y RK LA+ RPRV+G+F +
Sbjct: 551 KKIRYVNRKRLAERRPRVKGQFVR 574
>AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348
Length = 347
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 284 RLTAEQRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 331
+LT +R+ ++ RY +K+ R F K I+YA RK A+ RPR++GRFAK
Sbjct: 272 QLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
>AT1G68520.1 | chr1:25709331-25710749 REVERSE LENGTH=407
Length = 406
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 290 RKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEL 335
R+ ++SRY +KR R FSKKI+Y RK A+ RPR++GRF K +
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSSI 402
>AT5G02810.1 | chr5:638283-641461 REVERSE LENGTH=728
Length = 727
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 289 QRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 331
QR+ ++++ +KR ER F KK++Y RK LA+ RPRVRG+F +
Sbjct: 668 QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVR 710
>AT1G25440.1 | chr1:8933939-8935284 REVERSE LENGTH=418
Length = 417
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 290 RKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 331
R+ ++SRY +KR R FSKKI+Y RK A+ RPR++GRF K
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 402
>AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 284 RLTAEQRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKND 333
+L+ R+ ++ RY +KR R F K I+YA RK A+ RPRV GRFAK +
Sbjct: 300 QLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKRE 349
>AT1G28050.1 | chr1:9775768-9777657 REVERSE LENGTH=434
Length = 433
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 261 NDSPLTLPSTEGSS----------LEDTPYKGVRLTA---------EQRKEKISRYIKKR 301
N+ P+T S +GS+ + T K RL A + R + + RY +KR
Sbjct: 337 NNRPITFGSEKGSNSSSDLHFTEHIAGTSCKTTRLVATKADLERLAQNRGDAMQRYKEKR 396
Query: 302 NERNFSKKIKYACRKTLADSRPRVRGRFAKNDE 334
R + K I+Y RK AD+R RVRGRF K E
Sbjct: 397 KTRRYDKTIRYESRKARADTRLRVRGRFVKASE 429
>AT1G73870.1 | chr1:27779214-27780522 FORWARD LENGTH=393
Length = 392
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 289 QRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEL 335
+R+ ++ RY +KR R FSKKI+Y RK A+ RPR++GRF K L
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTSL 390
>AT5G14370.1 | chr5:4632147-4633651 REVERSE LENGTH=340
Length = 339
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 284 RLTAEQRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDE 334
RL R+ + RY +KR R FSK+I+Y RK A+ RPRV+GRF K ++
Sbjct: 288 RLWRGHREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKRED 338
>AT5G57180.2 | chr5:23168393-23170763 FORWARD LENGTH=436
Length = 435
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 290 RKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 331
R+ + RY +KR R FSKKI+Y RK AD RPR++GRF +
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVR 424
>AT3G21880.1 | chr3:7706748-7708093 FORWARD LENGTH=365
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 250 GENTQHMVTGCNDSPLTLPSTEGSSLEDTPYK-GVRLTAEQ-RKEKISRYIKKRNERNFS 307
GEN C SP G + + P++ ++ Q R E RY +K+ +R+F
Sbjct: 272 GENNAADYQDCGMSP-------GFIMSEAPWETNFEVSCPQARNEAKLRYKEKKLKRSFG 324
Query: 308 KKIKYACRKTLADSRPRVRGRFAK 331
K+I+YA RK AD+R RV+GRF K
Sbjct: 325 KQIRYASRKARADTRKRVKGRFVK 348
>AT3G21175.1 | chr3:7422832-7424598 FORWARD LENGTH=298
Length = 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 256 MVTGCNDSPLTLPSTEGSSLEDTPYKGV-----RLTAEQRKEKISRYIKKRNERNFSKKI 310
++ G + P TLP+T GS ++ G+ RL+ QR + R+ +KR RNF K I
Sbjct: 104 LLLGGREVPHTLPTTLGSPHQNNRVLGLSGTPQRLSVPQRLASLLRFREKRKGRNFDKTI 163
Query: 311 KYACRKTLADSRPRVRGRFAKNDELCEATRSSSQDF 346
+Y RK +A R +G+F + + S+ D+
Sbjct: 164 RYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDW 199
>AT2G47890.1 | chr2:19608245-19609476 FORWARD LENGTH=333
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 289 QRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 331
+R +SRY +K+ R + K I+Y RK A+SR R+RGRFAK
Sbjct: 286 ERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
>AT2G46790.1 | chr2:19232874-19234901 FORWARD LENGTH=469
Length = 468
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 284 RLTAEQRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 331
R + QR+ + ++ KR +R F KK++Y RK LA+ RPRV+G+F +
Sbjct: 411 RWSRSQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR 458
>AT1G49130.1 | chr1:18174741-18175936 REVERSE LENGTH=327
Length = 326
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 289 QRKEKISRYIKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 331
+R+ ++ RY KR R F KKI+Y RK AD RPR++GRF +
Sbjct: 277 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVR 319
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.128 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,832,257
Number of extensions: 310044
Number of successful extensions: 665
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 663
Number of HSP's successfully gapped: 32
Length of query: 388
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 288
Effective length of database: 8,364,969
Effective search space: 2409111072
Effective search space used: 2409111072
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 113 (48.1 bits)