BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0139200 Os03g0139200|AK069718
(582 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G33360.1 | chr2:14140901-14142870 FORWARD LENGTH=604 180 2e-45
AT1G04490.1 | chr1:1218020-1219325 REVERSE LENGTH=402 141 1e-33
AT2G37930.1 | chr2:15873284-15874770 FORWARD LENGTH=468 89 5e-18
AT5G59020.1 | chr5:23827160-23829603 REVERSE LENGTH=781 87 2e-17
AT1G63520.1 | chr1:23560205-23561873 FORWARD LENGTH=529 86 8e-17
AT4G11450.1 | chr4:6959065-6961223 REVERSE LENGTH=695 83 5e-16
AT5G01030.1 | chr5:10638-13003 FORWARD LENGTH=745 74 3e-13
AT2G29510.1 | chr2:12635231-12637838 FORWARD LENGTH=840 74 3e-13
>AT2G33360.1 | chr2:14140901-14142870 FORWARD LENGTH=604
Length = 603
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 189/360 (52%), Gaps = 32/360 (8%)
Query: 231 GLLQCIWKDG-LPHFELSLDNPMAVYTANPTKAHD----NDKPLDYVYLFHSGEQGRKDW 285
G LQ KD PHF SLD+ +Y A+ + + LDY YL H +
Sbjct: 257 GTLQFTMKDNKTPHFVFSLDDQKEIYVASLSTTSVGSGFDRSSLDYSYLIHLKK------ 310
Query: 286 LGNSSSVSRLVGKMKVSSSLVLNPDKSTSMETEFVLYGSPDDYLRQMQSSYGVTKGKGLA 345
G S LVGK+KVS+ ++ ++E +FVL+ S + Q+ + K +GL
Sbjct: 311 -GRGSEPQHLVGKLKVSTLFSVSSTNEKTVERQFVLFSSGGN--PQLPCHKDIRKNRGLP 367
Query: 346 KRVADIMKPSNLNSSPKHVWKFGKSSSQQIDEMTEIPEGEQCSAKESVLKNLVADDLPTN 405
K+V D +K + S + + +F ++SS D + P E S E + +L+ +DLP N
Sbjct: 368 KKVVDALKSTKRTSRQRSISRFSRTSSIP-DFCSWEPFQEHDSDLEPI--SLLDNDLPPN 424
Query: 406 QEIAAIVVRKQ----RRERRKSPVLGGWGLKFLEKAGATHPGSTEDGDVQNKKNNAGSVS 461
E +A+VVR+Q E + +GGWG+KFL+K T+D +K ++ S+
Sbjct: 425 LETSAVVVREQFPVEEEEEEEVEKVGGWGMKFLKKIPLAR---TKDASKCSK--HSTSID 479
Query: 462 AIFPRGYHGGAASKNGSPASLIGRWRSGGRCDCGGWDIGCPIRVLQNDGCGTSPQAESQS 521
+ P G HGG ++NG P+SLI RW+SGG CDC GWD+GCP+ VL+ G Q+E Q
Sbjct: 480 VVIPLGIHGGPRNRNGGPSSLIQRWKSGGCCDCSGWDLGCPLTVLK--GQARKDQSEGQC 537
Query: 522 QDRKSVELSVKGAKKG-PMFRLVNITDDLHIIYFDSSLSPLQCFSAGIAIIHSQAPHLYP 580
EL +G +G P R++N+ D L+ + + +S LQ FS +A IHSQ+ L P
Sbjct: 538 N---LFELFTEGLMQGSPGLRIMNVRDGLYFVQSQAKISVLQSFSIALAYIHSQSQRLRP 594
>AT1G04490.1 | chr1:1218020-1219325 REVERSE LENGTH=402
Length = 401
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 184/371 (49%), Gaps = 62/371 (16%)
Query: 217 NQPVLSSCPSSLSAGLLQCIWK-DGLPHFELSLDNPMAVYTAN-PTKAHDNDKPLDYVYL 274
++ V+S + S G LQ + +G PHF L+N VY A+ + D + Y+
Sbjct: 83 HKKVISFSSKTFSQGTLQFTMRANGTPHFVFKLENQKDVYVASLSSNVQDQN---SYMIH 139
Query: 275 FHSGEQGRKDWLGNSSSVSRLVGKMKVSSSLVLNPDKSTSMETEFVLYGSPDDYLRQMQS 334
GE +S+S S LVG++ VS+ L +K +E EFVL+ S + L+ ++
Sbjct: 140 LQRGE--------SSASSSHLVGRINVST---LFSEKV--LEREFVLFSSNGENLKIPRT 186
Query: 335 SYGVTKGKGLAKRVADIMKPSNLNSSPKHVWKFGKSSSQQIDEMTEIPEGEQCSAKESVL 394
K +GL+K+V +K + + + ++S I ++ E Q + +L
Sbjct: 187 R----KNRGLSKKVVHAVK------NERRTARLSRTSF--IPDLGSWDEQFQAQNYDCLL 234
Query: 395 KNLVADDLPTNQEIAAIVVRKQRRERRKSPVLGGWGLKFLEKAGATHPGSTEDGDVQNKK 454
KN LPTN E A+VV+++ E +GGWGLKFL+++ P D +
Sbjct: 235 KN----KLPTNLETLAVVVKQETIEDE----IGGWGLKFLKRS----PMFQRSNDASETE 282
Query: 455 NNAGSVS--AIFPRGYHGGAASKNGSPASLIGRWRSGGRCDCGGWDIGCPIRVLQNDGCG 512
+ S+S + P G HGG P+SLI RW+S G CDCGGWD+ C + +L+
Sbjct: 283 TSTSSISMNVVIPSGIHGGPED---GPSSLIERWKSQGNCDCGGWDLCCSLTLLK----- 334
Query: 513 TSPQAESQSQDRKSVELSVKGAKKGPM-FRLVNITDDLHIIYFDSSLSPLQCFSAGIAII 571
Q + + EL ++G+K ++VN++ L+++ F++ L+ LQ F+ +A I
Sbjct: 335 ------GQPRKDQYFELFIEGSKHETTGLKIVNVSGGLYLVQFEAKLTSLQSFAIALAFI 388
Query: 572 HSQA---PHLY 579
HS+ HLY
Sbjct: 389 HSEKLRPLHLY 399
>AT2G37930.1 | chr2:15873284-15874770 FORWARD LENGTH=468
Length = 467
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 458 GSVSAIFPRGYHGGAASKNGSPASLIGRWRSGGRCDCGGWDIGCPIRVLQNDGCGTSPQA 517
+ + I P G H N SP LI RW++GG CDCGGWDIGC +RVL + T +
Sbjct: 321 NTTTIILPSGVHTLPKDGNNSPLPLINRWKTGGECDCGGWDIGCKLRVLSYNHTKTQTLS 380
Query: 518 ESQSQDRKSVELSVKGAKKGPMFRLVNITDDLHIIYFDSSLSPLQCFSAGIAIIHSQA 575
Q D++ E P F++V+ D+LH + F SS+S L+ F +A+ Q+
Sbjct: 381 SFQLFDQERDE---------PAFKMVSHGDELHSVEFGSSISLLEAFFISLAVTSHQS 429
>AT5G59020.1 | chr5:23827160-23829603 REVERSE LENGTH=781
Length = 780
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 13/178 (7%)
Query: 401 DLPTNQEIAAIVVRKQRRERRKSPVLGGWGLKFLEKAGATHPGSTEDGDVQNKKNNAGSV 460
DL E+AAI+V+ R R++P L ++ AT G ED + S
Sbjct: 563 DLQLKNELAAIIVKMPRLFHRRAP------LNTVQDHNAT-SGELEDHIKDKFFDQDISA 615
Query: 461 SAIFPRGYHGGAASKNGSPASLIGRWRSGGRCDCGGWDIGCPIRVLQNDGCGTSPQAESQ 520
+ I G H + + G P+SLI RWR+GG CDCGGWD+GC +R+L N + ++ +
Sbjct: 616 TVILQSGVH--SMPQKGGPSSLIQRWRTGGSCDCGGWDMGCNLRILTNQHNLSYKKSATS 673
Query: 521 ----SQDRKSVELSVKGAKKGPMFRLVNITDDLHIIYFDSSLSPLQCFSAGIAIIHSQ 574
S +R + + A++ P I + ++ + ++SSLS LQ FS +A+ S+
Sbjct: 674 NSPPSSNRFELFFLGEQAEEHPFLSFKPIKEGIYSVAYNSSLSQLQAFSICMALAESR 731
>AT1G63520.1 | chr1:23560205-23561873 FORWARD LENGTH=529
Length = 528
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 148/359 (41%), Gaps = 73/359 (20%)
Query: 223 SCPSSLSAGLLQCIWKDGLPHFELSLDNPMAVYTANPTKAHDNDKPLDYVYLF-HSGEQG 281
S P L A L + ++ G+P F SLD P VY A+ +DK +VY F + G +
Sbjct: 178 SSPVHLHAHL-RMEYELGMPVFIFSLDLPDDVYMAS---TRMDDKESRFVYSFSYIGGRS 233
Query: 282 RKDWLGNSSSVSRLVGKMKVSSSLVLN-----PDKSTSMETEFVLYGSPDDYLRQMQSSY 336
K+ G SS L+G+M+VS+ + L D S +EFVL+ D R +S +
Sbjct: 234 NKNVSGKESS---LIGQMQVSTQICLEQEPYEEDLVASTVSEFVLF----DIARARRSGF 286
Query: 337 GVTKGKGLAKRVADIMKPSNLNSSPKHVWKFGKSSSQQIDEMTEIPEGEQCSAKESVLKN 396
KH + + G S E+ + +
Sbjct: 287 -------------------------KH---------ENLSRQNSFRRGLIFSETENSVSD 312
Query: 397 LVADDLPTNQEIAAIVVRKQRRERRKSPVLGGWGLKFLEKAGATHPGSTEDGDV-----Q 451
L+ + LP + R + + G W + L HPG V
Sbjct: 313 LLQEKLPRQNSFNRGLTRSLSKHSENT-ASGPWPVSDL------HPGLEIAAIVIQDSSS 365
Query: 452 NKKNNAGSVSAIFPRGYHGGAASKNGSPASLIGRWRSGGRCDCGGWDIGCPIRVLQNDGC 511
N K ++ + I P G HG ++N P ++ RWRSGG CDC GWD+GC + VL+
Sbjct: 366 NSKLSSREMKVIVPTGNHGLPDTENSCPTPILQRWRSGGGCDCSGWDMGCHLFVLE---- 421
Query: 512 GTSPQAESQSQDRKSVELSVKGAKK-GPMFRLVNITDDLHIIYFDSSLSPLQCFSAGIA 569
SP+ + +EL ++ K+ P + I + + + F + LS LQ FS +A
Sbjct: 422 --SPEL---INNHHGLELFIESGKEITPAMTMTCIREGHYEVKFHAKLSALQAFSICVA 475
>AT4G11450.1 | chr4:6959065-6961223 REVERSE LENGTH=695
Length = 694
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 170/378 (44%), Gaps = 44/378 (11%)
Query: 220 VLSSCPSSLSAGLLQCIWKDGLPHFELSLDNPMAVYTANPTKAHDNDKPLDYVYLFHSGE 279
VL S P L L + K+GLP F+ D+P VY A K +D +VY F S
Sbjct: 268 VLKSSPVHLHCRL-KMESKNGLPVFQFVSDSPEEVYAA---KTWKSDNGSTWVYTFSSAG 323
Query: 280 QGRKD-----WLGNSSSVSRLVGKMKVSSSLVLN-----PDKSTSMETEFVLYGSPDDYL 329
++ L + S S LV +M+V+ + D T M EFVLY +
Sbjct: 324 SRKRSSASVRGLTDVSKESLLVAQMQVTCKMCSEVRKKGQDPETLMVNEFVLYD-----I 378
Query: 330 RQMQSSYGVTKGKGLAKRVADIMKPSNLNSSPKHVWKFGKSSSQQIDEMTEIPEGEQCSA 389
Q + S + + L + +++ S + + S D M + + ++ S
Sbjct: 379 AQARRSVSTKEDQSLPLDTVNNASKNSVKSDSE--IRNNSMSGDASDTMKQRSQPKRTSQ 436
Query: 390 KESVLKN-----LVADDLPTNQEIAAIVVRKQRRERRKSPVLGGWGLKFLEKAGATHPGS 444
+ + A +L + EIAAI++ + E+R+S + +EK
Sbjct: 437 SYDLEASNGTNPWSAANLHPDLEIAAIII-QDTIEKRESLKYRRGDKRLMEKTNILGLSP 495
Query: 445 TEDGDVQNKKNNAGSVS-----AIFPRGYHGGAASKNGSPASLIGRWRSGGRCDCGGWDI 499
E + KK GS S + PRG HG ++N P+ LI RWRSGG CDCGGWD+
Sbjct: 496 IE----EEKKELFGSRSLEKLKVVIPRGNHGLPTTENSCPSPLIQRWRSGGGCDCGGWDM 551
Query: 500 GCPIRVLQNDGCGTS---PQAESQSQDRKSVELSVKGAKKG-PMFRLVNITDDLHIIYFD 555
CP+ VL N S P E+Q ++L V+GAK+ P + + + + ++F
Sbjct: 552 ACPLMVLGNPRISCSHDQPLVENQ----HPLQLFVQGAKEHIPALYMSFVEEGQYDVHFH 607
Query: 556 SSLSPLQCFSAGIAIIHS 573
+ LS LQ FS +AI+H+
Sbjct: 608 AQLSTLQAFSICVAILHN 625
>AT5G01030.1 | chr5:10638-13003 FORWARD LENGTH=745
Length = 744
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 460 VSAIFPRGYHGGAASKNGSPASLIGRWRSGGRCDCGGWDIGCPIRVLQNDGCGTSPQAES 519
S I P G H + + G+P+ LI RWRSGG CDCGGWD+GC + VL N T +
Sbjct: 614 TSVIIPGGVH--SFPEKGAPSPLISRWRSGGLCDCGGWDVGCKLHVLSNK---TVLHKFN 668
Query: 520 QSQDRKSVELSVKGAKKGPMFRLVNITDDLHIIYFDSSLSPLQCFSAGIAII 571
QS E+S + + P + + ++ + F S +SPLQ F + ++
Sbjct: 669 QSFTLFDQEVSEQDS--SPALAMTELKTGIYRVEFGSFVSPLQAFFVCVTVL 718
>AT2G29510.1 | chr2:12635231-12637838 FORWARD LENGTH=840
Length = 839
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 459 SVSAIFPRGYHGGAASKNGSPASLIGRWRSGGRCDCGGWDIGCPIRVLQND-GCGTSPQA 517
+ + + P G H + G P+SLI RW+S G CDCGGWD GC +R+L N +P
Sbjct: 665 NATVVLPSGVH--SLPHKGGPSSLIQRWKSDGSCDCGGWDTGCNLRILTNQHNKPINPSP 722
Query: 518 ESQSQDRKSVELSVKGAKKGPMFRLVNITDDLHIIYFDSSLSPLQCFSAGIAIIHSQAP 576
+ + + V+ P + ++ + +++SLS LQ FS IA+ + P
Sbjct: 723 TTSDAFKLFFQGGVQENNNQPYLSFTTYREGVYAVEYNTSLSLLQAFSICIAVNEGRNP 781
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.130 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,551,693
Number of extensions: 606874
Number of successful extensions: 1401
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1385
Number of HSP's successfully gapped: 8
Length of query: 582
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 478
Effective length of database: 8,255,305
Effective search space: 3946035790
Effective search space used: 3946035790
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 114 (48.5 bits)