BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0137700 Os03g0137700|AK069498
(435 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G58970.1 | chr3:21789659-21791163 REVERSE LENGTH=437 309 2e-84
AT4G28580.1 | chr4:14123489-14125003 FORWARD LENGTH=409 225 4e-59
AT5G09690.2 | chr5:3000990-3003415 REVERSE LENGTH=398 202 2e-52
AT5G64560.1 | chr5:25807025-25809395 REVERSE LENGTH=395 182 3e-46
AT1G16010.2 | chr1:5495462-5497082 REVERSE LENGTH=443 181 8e-46
AT1G80900.1 | chr1:30398289-30399870 REVERSE LENGTH=444 176 2e-44
AT3G19640.1 | chr3:6820969-6823104 FORWARD LENGTH=485 165 4e-41
AT2G03620.1 | chr2:1100489-1102168 REVERSE LENGTH=422 137 1e-32
AT5G09720.1 | chr5:3012328-3014399 REVERSE LENGTH=295 127 2e-29
>AT3G58970.1 | chr3:21789659-21791163 REVERSE LENGTH=437
Length = 436
Score = 309 bits (791), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/394 (45%), Positives = 238/394 (60%), Gaps = 20/394 (5%)
Query: 52 GNSKRKAANTRLWMRLDRRGGCEMILCDKSFVARRSGLPARDXXXXXXXXXXXXXILARE 111
G +K+K RLWMR DR G E++ CDKS + +R+ +PARD ILARE
Sbjct: 53 GKAKKKTGGARLWMRFDRTGAMEVVECDKSTIIKRASVPARDLRILGPVFSHSSNILARE 112
Query: 112 KAMVINLEFVRAIVTADEVLVLEPLAQEVLPFVEKLRKHFPLKSLDVDDVSTHMHTENQ- 170
KA+V+NLE ++AIVTA+EVL+L+PL EVLPFVE+L++ FP ++ + + + + ++
Sbjct: 113 KAIVVNLEVIKAIVTAEEVLLLDPLRPEVLPFVERLKQQFPQRNGNENALQASANVQSPL 172
Query: 171 DGELAQDVSCYEVEGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAVLDDLMKSV 230
D E A EG ELPFEFQVL+ ALE VC + +++ L A VLD+L K+V
Sbjct: 173 DPEAA--------EGLQSELPFEFQVLEIALEVVCSFVDKSVAALETEAWPVLDELTKNV 224
Query: 231 STRNLERVWSLKSSLTRLLASVQKVRDEVEHILDDNEAMAHLCTARK--TKGQKDLL--- 285
ST NLE V SLKS+LTRLLA VQKVRDE+EH+LDDNE MA L RK Q + +
Sbjct: 225 STENLEYVRSLKSNLTRLLARVQKVRDELEHLLDDNEDMADLYLTRKWIQNQQTEAILAG 284
Query: 286 ---NTILFPETRLCRTHSSIEN-STGIRTCVPSDSDAHILDMLLEAYFKQLDGIRNRIFL 341
N+I P H N S + T + D L+MLLEAYF QLDG+RN+I
Sbjct: 285 TASNSIALPAHNTSNLHRLTSNRSASMVTSNTEEDDVEDLEMLLEAYFMQLDGMRNKILT 344
Query: 342 VRQYIVDTEDYISIQLDNKRNELLGLQLTLIIASFGXXXXXXXXXXXXXXXPHRGYHFVI 401
VR+YI DTEDY++IQLDN+RNEL+ LQLTL IASF P Y +
Sbjct: 345 VREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFAIAAETLLASLFGMNIPCPLYS-IH 403
Query: 402 GVPFGQFVGATSFLCMSIVILLFTYAWRNRLLCT 435
GV FG FV + + LC+ + ++ YA +LL +
Sbjct: 404 GV-FGYFVWSVTALCIVLFMVTLGYARWKKLLGS 436
>AT4G28580.1 | chr4:14123489-14125003 FORWARD LENGTH=409
Length = 408
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 208/388 (53%), Gaps = 25/388 (6%)
Query: 50 GKGNSKRKAANTRLWMRLDRRGGCEMILCDKSFVARRSGLPARDXXXXXXXXXXXXXILA 109
G G SK++ LW R DR G E+ CDKS + RS + A+D ILA
Sbjct: 41 GTGKSKKRRGGVCLWTRFDRTGFMEVAGCDKSTIIERSSVSAKDLRTAFSHSSK---ILA 97
Query: 110 REKAMVINLEFVRAIVTADEVLVLEPLAQEVLPFVEKLRKHFPLKSLDVDDVSTHMHTEN 169
REKA+V+NLE ++A++T+++V++L+ L EVL ++L+ HFP K + + H
Sbjct: 98 REKAIVLNLEVIKAVITSEQVMLLDSLRPEVLTLTDRLKHHFPRKDGPENILQASSHGHQ 157
Query: 170 QDGELAQDVSCYEVEGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAVLDDLMKS 229
+ GE EG +LPFEF+VL+ A E C +S + DL A ++LD+L K
Sbjct: 158 EGGE----------EGLKSKLPFEFRVLEIAFEVFCSFVDSNVVDLETQAWSILDELTKK 207
Query: 230 VSTRNLERVWSLKSSLTRLLASVQKVRDEVEHILDDNEAMAHLCTARK--TKGQKDLLNT 287
VS NL+ + SLK+SLT LLA VQKVRDE+EH LDD E M L RK Q + +
Sbjct: 208 VSNENLKDLRSLKTSLTHLLARVQKVRDEIEHFLDDKEDMEDLYLTRKWIQNQQTEAASN 267
Query: 288 ILFPETRLCRTHSSIENSTGIRTCVPSDSDAHILDMLLEAYFKQLDGIRNRIFLVRQYIV 347
+ + L R H+S ST + V + D ++MLLEAYF QL+G+RN+I L++++I
Sbjct: 268 SIVSQPNLQR-HTSNRISTSM---VTEEDDIDDMEMLLEAYFMQLEGMRNKILLMKEHID 323
Query: 348 DTEDYISIQLDNKRNELLGLQLTLIIASFGXXXXXXXXXXXXXXXPHRGYHFVIGVP--F 405
TE Y+ I +++RN L+ L + + I ++ P Y P F
Sbjct: 324 STEAYVKILQNSRRNGLIHLMMLVNIGNYAITAGTVVVNLFGMNIPIGLY----STPDIF 379
Query: 406 GQFVGATSFLCMSIVILLFTYAWRNRLL 433
G V A LC+ + I+ YA +LL
Sbjct: 380 GYVVWAVVALCIVLFIVTVGYAKWKKLL 407
>AT5G09690.2 | chr5:3000990-3003415 REVERSE LENGTH=398
Length = 397
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 198/381 (51%), Gaps = 25/381 (6%)
Query: 53 NSKRKAAN-TRLWMRLDRRGGCEMILCDKSFVARRSGLPARDXXXXXXXXXXXXXILARE 111
+KRK + +R W+ +D G ++ DK + R + ARD IL RE
Sbjct: 28 TAKRKTSQLSRSWISIDATGQKTVLDVDKHVIMHRVQIHARDLRILDPNLFYPSAILGRE 87
Query: 112 KAMVINLEFVRAIVTADEVLVLEPLAQEVLPFVEKLRKHFPLKSLDVDDVSTHMHTENQD 171
+A+V+NLE ++AI+TA+EVL+ + + V+P +E+ ++ P V H + D
Sbjct: 88 RAIVLNLEHIKAIITAEEVLIRDSSDENVIPVLEEFQRRLP--------VGNEAHGVHGD 139
Query: 172 GELAQDVSCYEVEGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAVLDDLMKSVS 231
G+L G E PFEF+ L+ ALEA+C + ++L + A LD+L +S
Sbjct: 140 GDL----------GEEDESPFEFRALEVALEAICSFLAARTTELEKFAYPALDELTLKIS 189
Query: 232 TRNLERVWSLKSSLTRLLASVQKVRDEVEHILDDNEAMAHLCTARKTKGQKDLL----NT 287
+RNLERV LKS++TRL A VQKVRDE+E +LDD+ MA L RK G +
Sbjct: 190 SRNLERVRKLKSAMTRLTARVQKVRDELEQLLDDDGDMADLYLTRKLVGASSSVSVSDEP 249
Query: 288 ILFPETRLCRTHSSIENSTGIRTCVPSD-SDAHILDMLLEAYFKQLDGIRNRIFLVRQYI 346
I +P + + S + + T D +D L+MLLEAYF Q+D N++ +R+YI
Sbjct: 250 IWYPTSPTIGSMISRASRVSLVTVRGDDETDVEELEMLLEAYFMQIDSTLNKLTELREYI 309
Query: 347 VDTEDYISIQLDNKRNELLGLQLTLIIASFGXXXXXXXXXXXXXXXPHRGYHFVIGVPFG 406
DTEDYI+IQLDN RN+L+ L+L L + P+ H G F
Sbjct: 310 DDTEDYINIQLDNHRNQLIQLELMLSAGTVCVSVYSMIAGIFGMNIPNTWNHDH-GYIFK 368
Query: 407 QFVGATSFLCMSIVILLFTYA 427
V T C+ + +++ +YA
Sbjct: 369 WVVSLTGTFCIVLFVIILSYA 389
>AT5G64560.1 | chr5:25807025-25809395 REVERSE LENGTH=395
Length = 394
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 202/373 (54%), Gaps = 22/373 (5%)
Query: 64 WMRLDRRGGCEMILCDKSFVARRSGLPARDXXXXXXXXXXXXXILAREKAMVINLEFVRA 123
W +D G E + DK + R + ARD IL RE+A+V+NLE ++A
Sbjct: 27 WALIDATGQSEPLDVDKYEIMHRVQIHARDLRILDPNLSYPSTILGRERAIVLNLEHIKA 86
Query: 124 IVTADEVLVLEPLAQEVLPFVEKLRKHFPLKSLDVDDVSTHMHTENQDGELAQDVSCYEV 183
I+T++EVL+ +P + V+P VE+LR+ P+ + ++H + E+A + +
Sbjct: 87 IITSEEVLLRDPSDENVIPVVEELRRRLPVGN------ASHNGGQGDGKEIAGAQNDGDT 140
Query: 184 EGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAVLDDLMKSVSTRNLERVWSLKS 243
G E PFEF+ L+ ALEA+C + ++L +A LD+L +S+RNL+RV LKS
Sbjct: 141 -GDEDESPFEFRALEVALEAICSFLAARTAELETAAYPALDELTSKISSRNLDRVRKLKS 199
Query: 244 SLTRLLASVQKVRDEVEHILDDNEAMAHLCTARK---------TKGQKDLLNTILFPETR 294
++TRL A VQKVRDE+E +LDD++ MA L +RK + G+ + T ++
Sbjct: 200 AMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLSSASSPISSIGEPNWYTTSPTIGSK 259
Query: 295 LCRTHSSIENSTGIRTCVPSDSDAHILDMLLEAYFKQLDGIRNRIFLVRQYIVDTEDYIS 354
+ R + + T ++D L+MLLEAYF Q+D NR+ +R+YI DTEDYI+
Sbjct: 260 ISRA-----SRASLATVHGDENDVEELEMLLEAYFMQIDSTLNRLTTLREYIDDTEDYIN 314
Query: 355 IQLDNKRNELLGLQLTLIIASFGXXXXXXXXXXXXXXXPHRGYHFVIGVPFGQFVGATSF 414
IQLDN RN+L+ L+L L + P+ ++ G F VG T
Sbjct: 315 IQLDNHRNQLIQLELVLSSGTVCLSMYSLVAGIFGMNIPYT-WNDGHGYMFKYVVGLTGT 373
Query: 415 LCMSIVILLFTYA 427
LC+ + +++ +YA
Sbjct: 374 LCVVVFVIIMSYA 386
>AT1G16010.2 | chr1:5495462-5497082 REVERSE LENGTH=443
Length = 442
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 187/345 (54%), Gaps = 26/345 (7%)
Query: 55 KRKAANTRLWMRLDRRGGCEMILCDKSFVARRSGLPARDXXXXXXXXXXXXXILAREKAM 114
K++ R W+R+D G +++ DK + RR LPARD IL REKA+
Sbjct: 44 KKRGQGLRSWIRVDTSGNTQVMEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAI 103
Query: 115 VINLEFVRAIVTADEVLVLEPLAQEVLPFVEKLRKHFPLKSLDVDDVSTHMHTENQDGEL 174
V+NLE +R I+TADEVL+L L VL +V +L++ LK+ V ++ +++
Sbjct: 104 VVNLEQIRCIITADEVLLLNSLDNYVLRYVVELQQR--LKTSSVGEMWQQENSQLSRRRS 161
Query: 175 AQDVSCYEVEGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAVLDDLMKSVSTRN 234
+ +E ++ LPFEF+ L+ ALEA C +S S+L A +LD+L +ST N
Sbjct: 162 RSFDNAFENSSPDY-LPFEFRALEIALEAACTFLDSQASELEIEAYPLLDELTSKISTLN 220
Query: 235 LERVWSLKSSLTRLLASVQKVRDEVEHILDDNEAMAHLCTARKTK-------GQKDLLN- 286
LERV LKS L L VQKVRDE+E ++DD+ MA + K + G + LL
Sbjct: 221 LERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMEGSMYGDQSLLGY 280
Query: 287 ------TILFPETRLCRTHSS--IENSTGIR-----TCVPSDSDAHI--LDMLLEAYFKQ 331
++ P + + S ++ S I + S+ +I L+MLLEAYF
Sbjct: 281 RSNDGLSVSAPVSPVSSPPDSRRLDKSLSIARSRHDSARSSEGAENIEELEMLLEAYFVV 340
Query: 332 LDGIRNRIFLVRQYIVDTEDYISIQLDNKRNELLGLQLTLIIASF 376
+D N++ +++YI DTED+I+IQLDN RN+L+ +L L A+F
Sbjct: 341 IDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATF 385
>AT1G80900.1 | chr1:30398289-30399870 REVERSE LENGTH=444
Length = 443
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 187/352 (53%), Gaps = 39/352 (11%)
Query: 55 KRKAANTRLWMRLDRRGGCEMILCDKSFVARRSGLPARDXXXXXXXXXXXXXILAREKAM 114
K++ + W+R+D ++I DK + RR LPARD IL REKA+
Sbjct: 44 KKRGQGLKSWIRVDTSANSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAI 103
Query: 115 VINLEFVRAIVTADEVLVLEPLAQEVLPFVEKLRKHFPLKSLDVDDVSTHMHTENQDG-E 173
V+NLE +R I+TADEVL+L L VL +V +L++ LK+ V +V NQD E
Sbjct: 104 VVNLEQIRCIITADEVLLLNSLDNYVLRYVVELQQR--LKASSVTEVW------NQDSLE 155
Query: 174 LAQDVS-----CYEVEGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAVLDDLMK 228
L++ S + ++ LPFEF+ L+ ALEA C +S S+L A +LD+L
Sbjct: 156 LSRRRSRSLDNVLQNSSPDY-LPFEFRALEVALEAACTFLDSQASELEIEAYPLLDELTS 214
Query: 229 SVSTRNLERVWSLKSSLTRLLASVQKVRDEVEHILDDNEAMAHL-CTARKTKGQKDLLNT 287
+ST NLER LKS L L VQKVRDE+E ++DD+ MA + T +K + + L
Sbjct: 215 KISTLNLERARRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKKRMEGSLYGD 274
Query: 288 ILFPETRL--CRTHSS-------------IENSTGI--------RTCVPSDSDAHILDML 324
P R C + S+ +E S I R+ + + L+ML
Sbjct: 275 QSLPVYRTNDCFSLSAPVSPVSSPPESRRLEKSLSIVRSRHDSARSSEDATENIEELEML 334
Query: 325 LEAYFKQLDGIRNRIFLVRQYIVDTEDYISIQLDNKRNELLGLQLTLIIASF 376
LEAYF +D N++ +++YI DTED+I+IQLDN RN+L+ +L L A+F
Sbjct: 335 LEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATF 386
>AT3G19640.1 | chr3:6820969-6823104 FORWARD LENGTH=485
Length = 484
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 177/378 (46%), Gaps = 65/378 (17%)
Query: 64 WMRLDRRGGCEMILCDKSFVARRSGLPARDXXXXXXXXXXXXXILAREKAMVINLEFVRA 123
W+ L+ G E K + RR+GLPARD +L RE+A+VINLE ++A
Sbjct: 47 WLVLNSSGQSEPKEEGKHSIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKA 106
Query: 124 IVTADEVLVLEPLAQEVLPFVEKLRK-----HFPLKSLD-----------VDDVSTHMHT 167
I+TA EVL+L V PF+++L++ H K + VD T
Sbjct: 107 IITAQEVLLLNSKDPSVSPFIDELQRRILCHHHATKPQEEQNSGGEPHTRVDPAQGEAGT 166
Query: 168 ENQDGELAQDV-----SCYEVEGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAV 222
E G+ + E + + LPFEF L+ LEA S L A
Sbjct: 167 EQSSGDQGSEAKKDAKQSLENQDGSKVLPFEFVALEACLEAASSSLEHEALRLELEAHPA 226
Query: 223 LDDLMKSVSTRNLERVWSLKSSLTRLLASVQKVRDEVEHILDDNEAMAHL-CTARKTKGQ 281
LD L +ST NLERV +KS L + VQKVRDE+EH+LDD+E MA + T + +
Sbjct: 227 LDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLAQKL 286
Query: 282 KDLLNTI-------------------LFPE------------------TRLCRTHSSIE- 303
+D N+ L PE L T S++
Sbjct: 287 EDSSNSSMNESDTFEVDLPQGDEDDRLPPEFASEANRDGRYLQANDAHELLMSTQSALSR 346
Query: 304 NSTG-----IRTCVPSDSDAHILDMLLEAYFKQLDGIRNRIFLVRQYIVDTEDYISIQLD 358
NS G R+ + + D L+MLLEAYF Q+DGI N++ +R+Y+ DTEDYI+I LD
Sbjct: 347 NSRGTHTSSTRSAMTNKLDVEELEMLLEAYFVQIDGILNKLSTLREYVDDTEDYINIMLD 406
Query: 359 NKRNELLGLQLTLIIASF 376
+K+N LL + + L A+
Sbjct: 407 DKQNHLLQMGVMLTTATL 424
>AT2G03620.1 | chr2:1100489-1102168 REVERSE LENGTH=422
Length = 421
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 177/351 (50%), Gaps = 57/351 (16%)
Query: 55 KRKAANTRLWMRLDRRGGCEMILCDKSFVARRSGLPARDXXXXXXXXXXXXXILAREKAM 114
K++ ++R W+++D+ G ++ DK+ + +R LP+RD IL RE+A+
Sbjct: 42 KKRGQSSRSWVKIDQDGNSAVLELDKATIMKRCSLPSRDLRLLDPLFIYPSSILGRERAI 101
Query: 115 VINLEFVRAIVTADEVLVLEPLAQEVLPFVEKLRKHFPLK-SLDVDDVSTHMHTENQDGE 173
V++LE +R I+TA+EV+++ V+ + +L K +L+V D
Sbjct: 102 VVSLEKIRCIITAEEVILMNARDASVVQYQSELCKRLQSNHNLNVKD------------- 148
Query: 174 LAQDVSCYEVEGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAVLDDLMKSVSTR 233
+LPFEF+ L+ LE CLS ++ +++L VLD+L ++ST
Sbjct: 149 ---------------DLPFEFKALELVLELSCLSLDAQVNELEMEVYPVLDELATNISTL 193
Query: 234 NLERVWSLKSSLTRLLASVQKVRDEVEHILDDNEAMAHL-CTARKTKGQ----------- 281
NLE V LK L L VQKV DE+EH++DD++ MA + T +K + +
Sbjct: 194 NLEHVRRLKGRLLTLTQKVQKVCDEIEHLMDDDDDMAEMYLTEKKERAEAHASEELEDNI 253
Query: 282 -KDLLNTILFPET--------------RLCRTHSSIENSTGIRTCVPS-DSDAHILDMLL 325
+D ++ + ++ +L R SSI S S + L+MLL
Sbjct: 254 GEDFESSGIVSKSAPVSPVGSTSGNFGKLQRAFSSIVGSHKSLLSSSSIGENIDQLEMLL 313
Query: 326 EAYFKQLDGIRNRIFLVRQYIVDTEDYISIQLDNKRNELLGLQLTLIIASF 376
EAYF +D +++ +++YI DTED I+I+L N +N+L+ QL L A+F
Sbjct: 314 EAYFVVVDNTLSKLSSLKEYIDDTEDLINIKLGNVQNQLIQFQLLLTAATF 364
>AT5G09720.1 | chr5:3012328-3014399 REVERSE LENGTH=295
Length = 294
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 30/276 (10%)
Query: 64 WMRLDRRGGCEMILCDKSFVARRSGLPARDXXXXXXXXXXXXXILAREKAMVINLEFVRA 123
W+ +D G ++ DK + R + ARD IL RE+A+V+NLE ++A
Sbjct: 21 WISIDATGKKTVLDVDKYVIMHRVQIHARDLRILDPNLFYPSAILGRERAIVLNLEHIKA 80
Query: 124 IVTADEVLVLEPLAQEVLPFVEKLRKHFPLKSLDVDDVSTHMHTENQDGELAQDVSCYEV 183
I+TA EVL+ + + ++P +E+ + V H DG++ ++
Sbjct: 81 IITAKEVLIQDSSDENLIPTLEEFQTRL--------SVGNKAHGGQLDGDVVEE------ 126
Query: 184 EGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAVLDDLMKSVSTRNLERVWSLKS 243
E FEF+ L+ ALEA+C + +L +SA LD+L +++RNL RV LKS
Sbjct: 127 ----DESAFEFRALEVALEAICSFLAARTIELEKSAYPALDELTLKLTSRNLLRVCKLKS 182
Query: 244 SLTRLLASVQKVRDEVEHILDDNEAMAHLCTARKTKGQKDLL-----NTILFPET----- 293
S+TRL A VQK++DE+E +L+D+E MA L +RK G + +P +
Sbjct: 183 SMTRLTAQVQKIKDELEQLLEDDEDMAELYLSRKLAGASSPAIDSGEHINWYPTSPTIGA 242
Query: 294 RLCRTHSSIENSTGIRTCVPSDSDAHILDMLLEAYF 329
++ R S + S +R +D ++MLLEA+F
Sbjct: 243 KISRAKSHLVRSATVRG--DDKNDVEEVEMLLEAHF 276
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,265,460
Number of extensions: 270090
Number of successful extensions: 939
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 923
Number of HSP's successfully gapped: 11
Length of query: 435
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 334
Effective length of database: 8,337,553
Effective search space: 2784742702
Effective search space used: 2784742702
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 113 (48.1 bits)