BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0132900 Os03g0132900|AK099355
(267 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336 284 4e-77
AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281 251 4e-67
AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273 237 4e-63
AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322 145 3e-35
AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349 144 5e-35
AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265 132 2e-31
AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274 128 2e-30
AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266 122 1e-28
AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278 117 8e-27
AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282 114 5e-26
AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284 110 6e-25
AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281 96 2e-20
AT3G47540.2 | chr3:17521044-17522467 FORWARD LENGTH=284 90 1e-18
AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274 90 2e-18
>AT3G12500.1 | chr3:3962501-3963984 REVERSE LENGTH=336
Length = 335
Score = 284 bits (726), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/245 (56%), Positives = 172/245 (70%), Gaps = 16/245 (6%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFF 96
+ II+ + F+ ML HR D C FYTY+AFI AA FP FGTTG+ TR++E+AAFF
Sbjct: 86 LSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFF 145
Query: 97 GQTSHETTGGWATAPDGPFAWGYCRVNEITP--------------SDPPYYGRGPIQLTH 142
GQTSHETTGGWATAPDGP++WGYC E P S YYGRGP+QL+
Sbjct: 146 GQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSW 205
Query: 143 KYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGD 202
YNY L G A+G+DL+NNPDLV++D V+AF+ AIWFWMTAQ PKPSCH VI QW PS
Sbjct: 206 NYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDA 265
Query: 203 DRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQK 262
DR++GRLPGYG+ TNIINGG ECG+G DR+G+Y+RYC++F V G N+ C +Q+
Sbjct: 266 DRAAGRLPGYGVITNIINGGLECGRG-QDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQR 324
Query: 263 PYGGG 267
+ G
Sbjct: 325 SFVNG 329
>AT4G01700.1 | chr4:732413-733487 REVERSE LENGTH=281
Length = 280
Score = 251 bits (640), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 162/243 (66%), Gaps = 17/243 (6%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQGA-FYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFF 96
+ S++ R +++ + H+ + C FY Y+AF++A FP+FG+ GN TRRRE+AAF
Sbjct: 38 IMSLVPRTLYDQIFIHKDNNACPAKGFYPYEAFVEATRSFPKFGSVGNFWTRRREVAAFL 97
Query: 97 GQTSHETTGGWATAPDGPFAWGYCRVNEITP---------------SDPPYYGRGPIQLT 141
Q SHETTGGWATAPDGP+AWG C E++P S Y GRGPIQL+
Sbjct: 98 AQISHETTGGWATAPDGPYAWGLCFKEEVSPQSNYCDASNKDWPCVSGKSYKGRGPIQLS 157
Query: 142 HKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSG 201
YNY AG ALG D + NP+LV+++ V+AF+TA+WFWMT Q+PKPSCH+V+ N++ P+
Sbjct: 158 WNYNYGQAGRALGFDGLQNPELVANNSVLAFKTALWFWMTEQTPKPSCHNVMVNRYRPTK 217
Query: 202 DDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQ 261
DR++ R GYG+ TNIINGG ECG DRVGY++RY +F+V G N+ C +Q
Sbjct: 218 ADRAANRTVGYGLVTNIINGGLECGIP-GDGRVTDRVGYFQRYAQLFKVTTGPNLDCENQ 276
Query: 262 KPY 264
+P+
Sbjct: 277 RPF 279
>AT1G02360.1 | chr1:472138-473116 REVERSE LENGTH=273
Length = 272
Score = 237 bits (605), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/244 (45%), Positives = 157/244 (64%), Gaps = 17/244 (6%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFF 96
+ ++ R ++ + H+ + C FYTY++F++A FPRFG+ G+ T+R E+AAF
Sbjct: 30 IERLVPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRFPRFGSVGSPVTQRLEVAAFL 89
Query: 97 GQTSHETTGGWATAPDGPFAWGYCRVNEITPS---------------DPPYYGRGPIQLT 141
Q SHETTGGWATAPDGP+AWG C E++P + Y GRGPIQL+
Sbjct: 90 AQISHETTGGWATAPDGPYAWGLCFKEEVSPQSTYCDSSDTQWPCFPNKTYQGRGPIQLS 149
Query: 142 HKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSG 201
YNY AG ALG D + NP+ VS++ V+AF+TA+WFWMT QSPKPSCHDV+ ++ P+
Sbjct: 150 WNYNYGPAGRALGFDGLRNPETVSNNSVIAFQTALWFWMTPQSPKPSCHDVMIGKYRPTA 209
Query: 202 DDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQ 261
D ++ R G+G+ TNIINGG ECG DR+G+++RY +F+V G N+ C +Q
Sbjct: 210 ADLAANRTGGFGLTTNIINGGLECGIP-GDGRVNDRIGFFQRYTGLFKVATGPNLDCENQ 268
Query: 262 KPYG 265
+PY
Sbjct: 269 RPYA 272
>AT1G05850.1 | chr1:1766833-1768117 REVERSE LENGTH=322
Length = 321
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 123/243 (50%), Gaps = 26/243 (10%)
Query: 47 FESMLSHRGDQGCQGA-FYTYDAFIKAAGDFPR--FGTTGNDETRRRELAAFFGQTSHET 103
FE + S R F+ Y +FI AA F FGTTG ++E+AAF G + +T
Sbjct: 69 FEQLFSKRNTPIAHAVGFWDYQSFITAAALFEPLGFGTTGGKLMGQKEMAAFLGHVASKT 128
Query: 104 TGGWATAPDGPFAWGYCRVNEITPSD----------------PPYYGRGPIQLTHKYNYQ 147
+ G+ A GP AWG C E++P YYGRG + + +NY
Sbjct: 129 SCGYGVATGGPLAWGLCYNREMSPMQSYCDESWKFKYPCSPGAEYYGRGALPIYWNFNYG 188
Query: 148 LAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMT-AQSPKPSCHDVITNQWTPSGDDRSS 206
AG+AL DL+N+P+ + + +AF+ AIW WMT + +PS HD+ W P+ +D S
Sbjct: 189 AAGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLS 248
Query: 207 GRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGY-----GDNIACRDQ 261
R P +G N++ G CG+G S D + + +Y + D+ +G D ++C +Q
Sbjct: 249 KRGPTFGSTMNVLYGEYTCGQG-SIDPMNNIISHYLYFLDLMGIGREDAGPNDELSCAEQ 307
Query: 262 KPY 264
KP+
Sbjct: 308 KPF 310
>AT3G16920.1 | chr3:5776663-5777886 REVERSE LENGTH=349
Length = 348
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 124/243 (51%), Gaps = 25/243 (10%)
Query: 47 FESMLSHRGDQGCQGA-FYTYDAFIKAAGDFPR--FGTTGNDETRRRELAAFFGQTSHET 103
FE++ S R F+ Y +FI AA ++ FGT G +E+AAF G +T
Sbjct: 92 FENLFSKRNSPVAHAVGFWDYRSFITAAAEYQPLGFGTAGEKLQGMKEVAAFLGHVGSKT 151
Query: 104 TGGWATAPDGPFAWGYCRVNEITPSD----------------PPYYGRGPIQLTHKYNYQ 147
+ G+ A GP AWG C E++P Y+GRG + + YNY
Sbjct: 152 SCGYGVATGGPLAWGLCYNKEMSPDQLYCDDYYKLTYPCTPGVSYHGRGALPVYWNYNYG 211
Query: 148 LAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTA-QSPKPSCHDVITNQWTPSGDDRSS 206
G+AL +DL+++P+ + ++ +AF+ AIW WMT + PS HDV +W P+ +D ++
Sbjct: 212 QTGEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAA 271
Query: 207 GRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGY-----GDNIACRDQ 261
R PG+G N++ G + C G+ D + V +Y Y D+ VG + ++C DQ
Sbjct: 272 KRTPGFGATINVLYGDQICNSGFDNDEMNNIVSHYLYYLDLIGVGREEAGPHEKLSCADQ 331
Query: 262 KPY 264
+P+
Sbjct: 332 EPF 334
>AT2G43590.1 | chr2:18081592-18082749 REVERSE LENGTH=265
Length = 264
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 113/225 (50%), Gaps = 32/225 (14%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQGA-FYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFF 96
VGSI+T+ F ++++ G+ GC G FYT D+F+ AA FP F + RRE+A F
Sbjct: 68 VGSIVTQGFFNNIINQAGN-GCAGKRFYTRDSFVNAANTFPNFA----NSVTRREIATMF 122
Query: 97 GQTSHETTGGWATAPDGPFAWGYCRV-NEITPSDPP--YYGRGPIQLTHKYNYQLAGDAL 153
+HET YC+ N P P Y+GRGPIQL+ YNY G +L
Sbjct: 123 AHFTHETGHFCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGACGQSL 182
Query: 154 GLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYG 213
GLDL+ P+LV S+P VAFRT +WFWM + P + NQ G+G
Sbjct: 183 GLDLLRQPELVGSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFG 221
Query: 214 MATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIAC 258
ING E G NA R+GYY+ YC V G N++C
Sbjct: 222 ATIRAINGMECNGGNSGAVNA--RIGYYRDYCGQLGVDPGPNLSC 264
>AT3G54420.1 | chr3:20145935-20147034 FORWARD LENGTH=274
Length = 273
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 110/224 (49%), Gaps = 25/224 (11%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQGAFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFG 97
V I+T+ F ++S FY+ AF++A + RFG G+ + RRE+AAFF
Sbjct: 72 VAEIVTQEFFNGIISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFA 131
Query: 98 QTSHETTGGWATAPDGPFAWGYCRVNEIT-PSDPP--YYGRGPIQLTHKYNYQLAGDALG 154
+HET + YC N P +P YYGRGPIQL+ +NY AG A+G
Sbjct: 132 HVTHETGHFCYIEEIDGASKDYCDENATQYPCNPNKGYYGRGPIQLSWNFNYGPAGTAIG 191
Query: 155 LDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGM 214
D +N P+ V++DPV++F+TA+W+W P VI+ G+G
Sbjct: 192 FDGLNAPETVATDPVISFKTALWYWTNRVQP------VISQ---------------GFGA 230
Query: 215 ATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIAC 258
ING EC G +T + RV YY YC V G+N+ C
Sbjct: 231 TIRAINGALEC-DGANTATVQARVRYYTDYCRQLGVDPGNNLTC 273
>AT2G43580.1 | chr2:18078817-18080013 REVERSE LENGTH=266
Length = 265
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 118/234 (50%), Gaps = 50/234 (21%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFF 96
VG+I+T+ F ++++ G+ GC G +FYT D+FI A FP F T RRE+A F
Sbjct: 69 VGNIVTQIFFNNIINQAGN-GCAGKSFYTRDSFINATNTFPSFANT----VTRREIATMF 123
Query: 97 GQTSHETTGGWATAPDGPFAW-----GYCRV-----NEITPSDPP--YYGRGPIQLTHKY 144
++ET G F + G RV N P P Y+GRGP+ L+ +
Sbjct: 124 AHFTYET---------GHFCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNF 174
Query: 145 NYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDR 204
NY G +LGLDL+ P+LVSS+PVVAFRTA+WFWM + P + NQ
Sbjct: 175 NYGACGQSLGLDLLRQPELVSSNPVVAFRTALWFWMKSVRP-------VLNQ-------- 219
Query: 205 SSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIAC 258
G+G I+G + G+ NA R+GYY+ YC + G NI C
Sbjct: 220 ------GFGATIRAISGFDCDGRNLGGVNA--RIGYYRDYCGQLGLDPGANITC 265
>AT2G43570.1 | chr2:18076389-18077435 REVERSE LENGTH=278
Length = 277
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 112/227 (49%), Gaps = 40/227 (17%)
Query: 42 ITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTS 100
+T F S+L+ RGD C G FYT+D F+ AA +P FG + +RE+AAFF +
Sbjct: 81 VTPDFFNSILNQRGD--CPGKGFYTHDTFMAAANSYPSFGAS----ISKREIAAFFAHVA 134
Query: 101 HET-TGGWATAPDGPFAWG---YCRVNEITPSDPP-----YYGRGPIQLTHKYNYQLAGD 151
ET + DGP YC + P P YYGRG IQL+ YNY L G
Sbjct: 135 QETGFMCYIEEIDGPAKAASGEYCDTEK--PEFPCAQGKGYYGRGAIQLSWNYNYGLCGK 192
Query: 152 ALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPG 211
AL +L+ +P+ V+ D V+AF+TA WFW T + R+S + G
Sbjct: 193 ALDENLLASPEKVAQDQVLAFKTAFWFWTT--------------------NVRTSFK-SG 231
Query: 212 YGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIAC 258
+G +N EC G ST A +R+ Y++ YC V GDN+ C
Sbjct: 232 FGATIRAVN-SRECSGGDSTAKAANRIKYFQDYCGKLGVAPGDNLTC 277
>AT2G43610.1 | chr2:18088058-18089184 REVERSE LENGTH=282
Length = 281
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 108/224 (48%), Gaps = 33/224 (14%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQGAFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFG 97
+ S+IT A F S++S G FYT AFI AA F + T +RE+AA
Sbjct: 88 IASVITPAFFNSIMSKVGSGCPAKGFYTRQAFIAAAESFAAYKGT----VAKREIAAMLA 143
Query: 98 QTSHETTGGWATAPDGPFAWG-YCRVNEITPSDP--PYYGRGPIQLTHKYNYQLAGDALG 154
Q SHE+ G + + A G YC + P P YYGRGPIQ+T YNY AG LG
Sbjct: 144 QFSHES-GSFCYKEE--IARGRYCSPSTTYPCQPGKNYYGRGPIQITWNYNYGAAGKFLG 200
Query: 155 LDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGM 214
L L+ +PD+V+ P VAF+ A+WFW P + +Q G+G
Sbjct: 201 LPLLKDPDMVARSPTVAFQCAMWFWNKNVRP-------VLSQ--------------GFGA 239
Query: 215 ATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIAC 258
T INGG EC G + RV +Y +C V G N++C
Sbjct: 240 TTRRINGG-ECNGGRPAA-VQSRVNHYLDFCKKLGVTPGTNLSC 281
>AT2G43620.1 | chr2:18093954-18095025 REVERSE LENGTH=284
Length = 283
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 108/224 (48%), Gaps = 33/224 (14%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQGAFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFG 97
+ +++T A F+ ++S G+ FYT AFI AA F + T +RE+AA
Sbjct: 90 IENVVTPAFFDGIMSKVGNGCPAKGFYTRQAFIAAAQSFDAYKGT----VAKREIAAMLA 145
Query: 98 QTSHETTGGWATAPDGPFAWG-YCRVNEITPSDP--PYYGRGPIQLTHKYNYQLAGDALG 154
Q SHE+ G + + A G YC + P P YYGRGPIQ+T YNY AG LG
Sbjct: 146 QFSHES-GSFCYKEE--IARGKYCSPSTAYPCTPGKDYYGRGPIQITWNYNYGAAGKFLG 202
Query: 155 LDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGM 214
L L+ +PD+V+ P VAF+ A+WFW P + +Q G+G
Sbjct: 203 LPLLTDPDMVARSPQVAFQCAMWFWNLNVRP-------VLDQ--------------GFGA 241
Query: 215 ATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIAC 258
T INGGE G + RV YY +C + G N++C
Sbjct: 242 TTRKINGGE--CNGRRPAAVQSRVNYYLEFCRTLGITPGANLSC 283
>AT1G56680.1 | chr1:21250428-21251417 REVERSE LENGTH=281
Length = 280
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 106/225 (47%), Gaps = 32/225 (14%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQGAFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFG 97
+ SI+T A+F ++ G FYT +AFI A F + T +RE+AA
Sbjct: 84 IESIVTPALFHRLMRKVGSNCTGKGFYTREAFITAVKSFEGYKGT----VAKREIAAILA 139
Query: 98 QTSHETTGGWATAPDGPFAWGYCRVNEITP--SDPPYYGRGPIQLTHKYN--YQLAGDAL 153
Q S+E+ G + + YC ++ P S YYGRG +Q + K+N Y AG L
Sbjct: 140 QFSYES--GNFCYKEEVTSETYCSSSKTYPCQSGKKYYGRGLLQ-SIKWNEFYGEAGKYL 196
Query: 154 GLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYG 213
GL L+ +PD+V+ P VAF+ A+WFW T P S RL G+G
Sbjct: 197 GLPLLKDPDMVARSPEVAFKFAMWFWKTEVGP--------------------SLRL-GFG 235
Query: 214 MATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIAC 258
T ING E G ++ + ++R+ Y C F V G ++ C
Sbjct: 236 ATTMRINGIECGGMSWNAEAMQNRINQYLEICKWFGVNPGKDLYC 280
>AT3G47540.2 | chr3:17521044-17522467 FORWARD LENGTH=284
Length = 283
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQGAFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFG 97
V SI+T+ F ++++ G+ + F T D+FI AA +FP F ++ RRE+A+ F
Sbjct: 30 VSSIVTQGFFNNIINQAGNGCTRKRFNTRDSFIDAANNFPNFASS----VTRREIASMFA 85
Query: 98 QTSHETTGGWATAPDGPFAWGYCRVNEITPSDPPYYGRGPIQLTHKYNYQLAGDALGLDL 157
+HET + G C N + P +G H+ +LGLDL
Sbjct: 86 HVTHETGHFCYIEEIKKRSRGRCDEN-VEQRPCPSQSKGHSGRGHQ--------SLGLDL 136
Query: 158 VNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATN 217
+ P+LV S+P VAFR + FW+ + P + NQ G+G
Sbjct: 137 LRQPELVGSNPTVAFRKGLSFWINSVRP-------VLNQ--------------GFGATIR 175
Query: 218 IINGGEECGKGYSTDNAKDRVGYYKRYCDMFRV 250
IN G EC G S K R+GYY+ YC V
Sbjct: 176 AIN-GMECNGGNS-GAVKARIGYYRDYCRQLGV 206
>AT2G43600.1 | chr2:18086049-18087018 REVERSE LENGTH=274
Length = 273
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 31/215 (14%)
Query: 38 VGSIITRAMFESMLSHRGDQGCQGAFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFG 97
+ ++IT A+F+S++S FYTY+AFI A F FG + +RE+AA
Sbjct: 80 IETVITSALFDSIMSKVESNCSAKGFYTYEAFITA---FKSFGAY-KGKVAKREIAAILA 135
Query: 98 QTSHETTGGWATAPDGPFAWGYCRVNEITPSDP--PYYGRGPIQLTHKYNYQLAGDALGL 155
S+ + + YC ++ P +P YYGRG +Q Y AG LGL
Sbjct: 136 HFSYGSKS--FCYKEEISNERYCSKSKKYPCEPGKNYYGRGLLQSITWNEYYGAGKHLGL 193
Query: 156 DLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMA 215
L+ +PDLVS P VAF+ A+WFW ++ +P+ + G+G
Sbjct: 194 PLLKDPDLVSRSPEVAFKFAMWFW--NRNVRPALY-------------------LGFGEI 232
Query: 216 TNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRV 250
T ++ G ECG + D+ K++V Y +C+M V
Sbjct: 233 TKRVD-GRECG-NWRRDDTKNKVKQYIEFCEMLGV 265
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.139 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,335,624
Number of extensions: 283888
Number of successful extensions: 536
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 500
Number of HSP's successfully gapped: 14
Length of query: 267
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 170
Effective length of database: 8,447,217
Effective search space: 1436026890
Effective search space used: 1436026890
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)