BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0129200 Os03g0129200|Os03g0129200
(896 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17510.2 | chr2:7609395-7616242 REVERSE LENGTH=1013 1311 0.0
AT1G77680.1 | chr1:29192188-29195963 REVERSE LENGTH=1056 226 5e-59
AT5G02250.1 | chr5:454902-459063 FORWARD LENGTH=804 58 2e-08
>AT2G17510.2 | chr2:7609395-7616242 REVERSE LENGTH=1013
Length = 1012
Score = 1311 bits (3392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 652/970 (67%), Positives = 750/970 (77%), Gaps = 77/970 (7%)
Query: 1 MLQSKTFVKKTRAGRVQKVVREHYLRDDISCGAASCSTCGAVEHPLSADAAAILVVDTNV 60
MLQSK F KKTR GR+QK VRE YLRDDI CGA SC +C + LS+ + I+VVDTNV
Sbjct: 46 MLQSKVFNKKTRGGRIQKQVREVYLRDDIYCGAFSCKSCDSSAARLSS--SKIIVVDTNV 103
Query: 61 VLHQIDLLENPAIXXXXXXXXXXXXXKNKNLAVFNRIKALCSNKARRFFVFTNEHHRDTY 120
VLHQIDLLEN AI KN+N +V+NRI+ LCSN AR+F+VF+N H+DTY
Sbjct: 104 VLHQIDLLENKAIDTVVVLSVVLDEVKNRNRSVYNRIRLLCSNPARQFYVFSNHVHKDTY 163
Query: 121 VKEMVGESPNDRNDRAIRVATRWYQSHLGENVKVLLITNDRDNKRKAIEEGINAETVESY 180
V+ M ES ND NDRAIRVAT WYQ HLG+ +VLL+TNDR+NKRKA EEGI+AET+E+Y
Sbjct: 164 VQAMEKESANDHNDRAIRVATLWYQKHLGDTSQVLLVTNDRENKRKATEEGISAETIEAY 223
Query: 181 VRSLAQPGLLDLVVVSTSGDVTMEDVEDLRPSKKKVIYSEHKPMSEITAGLRCGIYHQGK 240
V+SL QP LLDL+ T+ D+TMED +D RPSK+K+IY EHKPMSEITAGL GIYHQGK
Sbjct: 224 VKSLGQPELLDLLAQPTNEDITMEDADDSRPSKRKLIYQEHKPMSEITAGLHRGIYHQGK 283
Query: 241 LRVNRYNPFEAYVGSESIGDEIVIHGRSNMNRAFDGDIVAVELLPQDQWHESKSF-IAXX 299
LRVNR+NP+EAYVGSESIG+EI+I+GRSNMNRAFDGDIVAVELLP+DQW + K+ IA
Sbjct: 284 LRVNRFNPYEAYVGSESIGEEIIIYGRSNMNRAFDGDIVAVELLPRDQWQDEKALSIAEE 343
Query: 300 XXXXXXXVHLAPNSADDAPRKANPTQXXXXXXXXXXXXXXXXXXXXIIKRNWNSYCGSLE 359
VHLAP++ DDAPR +N + +I+RNW+SYCGSLE
Sbjct: 344 DDEEDDTVHLAPDNVDDAPRTSNLSHETSGDKNAAPVRPSGRVVG-VIRRNWHSYCGSLE 402
Query: 360 PMPMPAGSGGVAHALFVSKDRRIPKIRIQTRQLGNLLDKRIIVAVDSWDVLSRYPSGHYV 419
PM +PAGSGG AHALFVSKDRRIPKIRI TRQL NLLD RI+VAVDSWD SRYPSGHYV
Sbjct: 403 PMSLPAGSGGTAHALFVSKDRRIPKIRINTRQLQNLLDMRIVVAVDSWDRQSRYPSGHYV 462
Query: 420 -------------------------------------VLIENDINTRPFSTQVLACLPPL 442
VLIEND++ PFS+QVLACLPPL
Sbjct: 463 RPIGKIGDKETETEVRDHINLFDSILVGVRWARVGKVVLIENDVDYSPFSSQVLACLPPL 522
Query: 443 PWTLSPEDLANPNRQDLRHVRVFSVDPPD------------------------------- 471
PW++S ED++NP RQDLRH+ VFSVDPP
Sbjct: 523 PWSVSSEDVSNPVRQDLRHLLVFSVDPPGCKDIDDALHCTSLPNGNFELGVRILESSDSH 582
Query: 472 ----IADVTNFVHPGTPLDEEASQRGTSVYLVGQRIDMLPKPLTEDVCSLRADVERLAFS 527
IADVTNFVHPGTPLD+EAS+RGTSVYLV +RIDMLPKPLTED+CSLRADVERLAFS
Sbjct: 583 KYDYIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFS 642
Query: 528 VIWEMTPHADIISTRYTKSVIKSCAAMSYVEAQARMDDSRLVDPLTVDLRNLNSLAKIMR 587
VIWEM+P A+IISTR+TKS+IKS AA+SY+EAQARMDDSRL D LT DLRN+N+LAKIMR
Sbjct: 643 VIWEMSPDAEIISTRFTKSIIKSSAALSYIEAQARMDDSRLTDSLTTDLRNMNTLAKIMR 702
Query: 588 HRRCERGALTLASAEVKFEIDSETHDPLDIGIYQIREANQMIEEFMLAANISVAEKILKH 647
RR +RGALTLASAEVKF+ID E HDPL+IG+YQI EANQM+EEFMLAAN+SVA +ILK
Sbjct: 703 QRRIDRGALTLASAEVKFDIDPENHDPLNIGMYQILEANQMVEEFMLAANVSVAGQILKL 762
Query: 648 FPLCSLLRRHPSPTKEMLEPLLRTASSVGLNLDVSSSKALAESLDNAKNDDPYFNKLIRI 707
FP CSLLRRHP+PT+EMLEPLLRTA+++GL LDVSSSKALA+SLD A +DPYFNKLIRI
Sbjct: 763 FPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLDVSSSKALADSLDRAVGEDPYFNKLIRI 822
Query: 708 LATRCMTQAVYFCSGDLTFSEYYHYGLAASLYTHFTSPIRRYADVIVHRLLAAALEIAKL 767
LATRCMTQAVYFCSGDL+ EY+HYGLAA LYTHFTSPIRRYADV VHRLLAA+L I KL
Sbjct: 823 LATRCMTQAVYFCSGDLSPPEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYKL 882
Query: 768 PPLFQDGPQLTGVADNLNYRHRNAQMASRASVELHTLIYFRTRRMDTEARIVKIKANGFI 827
P +FQD PQLT VADNLNYRHRNAQMA RASVEL+ LIYFRTR D EAR+VKI++NGFI
Sbjct: 883 PTVFQDRPQLTSVADNLNYRHRNAQMAGRASVELYVLIYFRTRPTDEEARVVKIRSNGFI 942
Query: 828 VFVPKFGIEGPIYLTPKGDKG-GDWVVDEVHQRVTKPGTNVSYAVLQTVMIHMEVVEPQP 886
VFVPK+GIEGP+YLT KG+KG GDW VDE Q++ K ++SY+VLQTV IHMEVVEPQP
Sbjct: 943 VFVPKYGIEGPVYLTGKGEKGAGDWYVDEEKQKIVKMDGSLSYSVLQTVKIHMEVVEPQP 1002
Query: 887 HRPKLQLTLI 896
+RPKLQLTL+
Sbjct: 1003 NRPKLQLTLL 1012
>AT1G77680.1 | chr1:29192188-29195963 REVERSE LENGTH=1056
Length = 1055
Score = 226 bits (576), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 163/517 (31%), Positives = 243/517 (47%), Gaps = 86/517 (16%)
Query: 419 VVLIENDINTRPFSTQVLACLPPLPWTLSPEDLANPNRQDLRHVRVFSVDPPD------- 471
+L +N + FS L LP +PW + E++ R+DLR + V ++DP
Sbjct: 441 AILYQNSVCDSDFSPGSLTSLPRVPWEVPEEEVQR--RKDLRDLCVLTIDPSTATDLDDA 498
Query: 472 ----------------IADVTNFVHPGTPLDEEASQRGTSVYLVGQRIDMLPKPLTEDVC 515
IADV+ FV P T LD EA R TSVYL+ ++I MLP L+E+V
Sbjct: 499 LSVQSLPGGFFRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVG 558
Query: 516 SLRADVERLAFSVIWEMTPHADIISTRYTKSVIKSCAAMSYVEAQARMDDSRLVDP---- 571
SL +RLAFS++W++ D+I +++I+SC +SY AQ +D V
Sbjct: 559 SLSPGADRLAFSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDGKSDVAENGWP 618
Query: 572 ----------LTVDLRNLNSLAKIMRHRRCERGALTLASAEVKFEIDSETHDPLDIGIYQ 621
+T ++ L+ ++ +R +R GAL L +++ F D E P D
Sbjct: 619 ALHGSFKWCDVTRSVKQLSEISTTLRQKRFRNGALQLENSKPVFLFD-EHGVPYDFVTCS 677
Query: 622 IREANQMIEEFMLAANISVAEKILKHFPLCSLLRRHPSPTKEMLEPLLRTASSVGLNLDV 681
+ +N ++EEFML AN++ AE I + + SLLRRHP P L+ S G++LD+
Sbjct: 678 RKGSNFLVEEFMLLANMTAAEVISQAYRASSLLRRHPEPNTRKLKEFEGFCSKHGMDLDI 737
Query: 682 SSSKALAESLDNAKN---DDPYFNKLIRILATRCMTQAVYFCSGDL--TFSEYYHYGLAA 736
SSS L +SL+ DD F ++ A + M A YFC+G+L + +E+ HY LA
Sbjct: 738 SSSGQLQDSLEKITGNLKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAV 797
Query: 737 SLYTHFTSPIRRYADVIVHRLLAA------------------------------------ 760
LYTHFTSP+RRY D++VHR LAA
Sbjct: 798 PLYTHFTSPLRRYPDIVVHRALAAALEAEELYSKQKQTAIDEGRSCFTGIHFNKDAAESI 857
Query: 761 ----ALEIAKLPPLFQDGPQLTGVADNLNYRHRNAQMASRASVELHTLIYFRTRRM-DTE 815
AL +A L L+ VA N R A+ A +L+T + + + E
Sbjct: 858 EGKEALSVAALKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVLKQKEIFPCE 917
Query: 816 ARIVKIKANGFIVFVPKFGIEGPIYLTPKGDKGGDWV 852
AR++ + + V++ K GIE IY DW+
Sbjct: 918 ARVMNLGSRFMTVYISKLGIERRIYYDQIEGLCADWL 954
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 204 EDVEDLRPSKKKVIYSEHKPMSEITAGLRCGIYHQGKLRVNRYNPFEAYVGSESIGDEIV 263
E + + S ++ I+S H + +T L G + RVN +N EAY + + +I+
Sbjct: 134 ELFQQIEGSSQRKIFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNEAYCKIDGVPTDIL 193
Query: 264 IHGRSNMNRAFDGDIVAVELLPQDQWHESKSFI 296
I+G +RA +GD V ++L P W + K F+
Sbjct: 194 INGNVCQSRAVEGDTVVIKLDPLSLWPKMKGFV 226
>AT5G02250.1 | chr5:454902-459063 FORWARD LENGTH=804
Length = 803
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 174/443 (39%), Gaps = 75/443 (16%)
Query: 450 DLANPNRQDLRHVRVFSVDPPD-----------------------IADVTNFVHPGTPLD 486
D+ R DL H++V+++D + +AD +V PG+ +D
Sbjct: 393 DIDAVRRIDLTHLKVYAIDVDEADELDDALSATRLQDGRIKIWIHVADPARYVTPGSKVD 452
Query: 487 EEASQRGTSVYLVGQRIDMLPKPLTEDVCSLRADVERLAFSVIWEMTPHADIISTRYTKS 546
EA +RGTSV+L M P+ L + SLR A SV + I S
Sbjct: 453 REARRRGTSVFLPTATYPMFPEKLAMEGMSLRQGENCNAVSVSVVLRSDGCITEYSVDNS 512
Query: 547 VIKSCAAMSYVEAQARMDDSRLVDPLTVDLRNLNSLAKIMRHRRCERGALTLASAEVKFE 606
+I+ ++Y A + + +L+ L+ A I R E+GA+ + E + +
Sbjct: 513 IIRPTYMLTYESASELLHLNLEE---EAELKLLSEAAFIRSQWRREQGAVDTTTLETRIK 569
Query: 607 -IDSETHDPLDIGIYQIREANQMIEEFMLAANISVAEKILKHFPLCSLLRRHPSPTKEML 665
++ E +PL I +Y +A+ LA + IL + + +H P
Sbjct: 570 VVNPEDPEPL-INLYVENQAD-------LAMRLVFEMMILCGEVVATFGSQHNIPLPYRG 621
Query: 666 EPLLRTASSVGLNLDVSSSKALAESLDNAKNDDPYFNKLIRILATRCMTQAVYFCSGDLT 725
+P N+DVS+ L E R + + ++
Sbjct: 622 QP--------QSNIDVSAFAHLPEG------------------PVRSSSIVKVMRAAEMN 655
Query: 726 FSEYYHYG-LAASLYTHFTSPIRRYADVIVHRLLAAALEIAKLPPLFQDGPQLTGVADNL 784
F +G L Y FTSPIRRY D+ H + A L P F G +L G+A ++
Sbjct: 656 FRCPVRHGVLGIPGYVQFTSPIRRYMDLTAHYQIKAFLRGGDNFP-FSAG-ELEGIAASV 713
Query: 785 NYRHRNAQMASRASVELHTLIYFRTRRMDTE-----ARIVKIKANGFIVFVPKFGIEGPI 839
N + + + S + + + R + + R VK + ++ + G +
Sbjct: 714 NMQSKVVRKLSNTGLRYWVIEFLRRQEKGKKYTALVLRFVKDRIASLLLV--EVGFQATA 771
Query: 840 YLTPKGDKGGDWV---VDEVHQR 859
+++ +G + GD + V+E H R
Sbjct: 772 WVS-EGKQVGDEIEVRVEEAHPR 793
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,364,946
Number of extensions: 751059
Number of successful extensions: 1687
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1679
Number of HSP's successfully gapped: 6
Length of query: 896
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 789
Effective length of database: 8,173,057
Effective search space: 6448541973
Effective search space used: 6448541973
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)