BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0111100 Os03g0111100|AK102025
(554 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05980.1 | chr5:1799738-1804441 REVERSE LENGTH=572 624 e-179
AT3G55630.3 | chr3:20636785-20639395 FORWARD LENGTH=493 592 e-169
AT3G10160.1 | chr3:3139588-3143949 REVERSE LENGTH=626 530 e-151
AT5G41480.1 | chr5:16595967-16598523 FORWARD LENGTH=531 155 5e-38
>AT5G05980.1 | chr5:1799738-1804441 REVERSE LENGTH=572
Length = 571
Score = 624 bits (1608), Expect = e-179, Method: Compositional matrix adjust.
Identities = 310/508 (61%), Positives = 387/508 (76%), Gaps = 15/508 (2%)
Query: 59 YEDVMGRLSSLITQKVRAHSGNRGNQWDLMAHYLQILELEEPIARMKVIHVAGTKGKGST 118
YE+ + LSSLIT++ RA N+G++++L+ YL++L+LEE I +M VIHVAGTKGKGST
Sbjct: 67 YEEALAALSSLITKRSRADKSNKGDRFELVFDYLKLLDLEEDILKMNVIHVAGTKGKGST 126
Query: 119 CTFTEAILRSCGFSTGLFTSPHLMDVRERFRLNGVDISEEKFLKYFWWCWNKLKEKTDDD 178
CTFTE+I+R+ GF TGLFTSPHL+DVRERFRL+GVDISEEKFL YFWWC+N+LKE+T+++
Sbjct: 127 CTFTESIIRNYGFRTGLFTSPHLIDVRERFRLDGVDISEEKFLGYFWWCYNRLKERTNEE 186
Query: 179 IPMPTYFRFLALLAFKIFSAEQVDVAVLEVGLGGKFDATNVVEAPVVCGIASLGYDHMEI 238
IPMPTYFRFLALLAFKIF+AE+VD A+LEVGLGGKFDATN V+ PVVCGI+SLGYDHMEI
Sbjct: 187 IPMPTYFRFLALLAFKIFAAEEVDAAILEVGLGGKFDATNAVQKPVVCGISSLGYDHMEI 246
Query: 239 LGNTLGEIAGEKAGIFKKGVPAYTAPQPEEAMIALKQRASELGVSLQVAHPLEPHQLKDQ 298
LG+TLG+IAGEKAGIFK GVPA+T PQP+EAM L+++ASE V+L+V PL L Q
Sbjct: 247 LGDTLGKIAGEKAGIFKLGVPAFTVPQPDEAMRVLEEKASETEVNLEVVQPLTARLLSGQ 306
Query: 299 HLGLRGEHQYVNAGLAVALASTWLEKQGHVERIPLNRTDPLPDQFISGLSNASLQGRAQI 358
LGL GEHQYVNAGLAV+LAS WL++ G +E + LP++FI GL+ ASLQGRAQ+
Sbjct: 307 KLGLDGEHQYVNAGLAVSLASIWLQQIGKLEVPSRTQMSILPEKFIKGLATASLQGRAQV 366
Query: 359 ITDSQVNSGEEDKDCSLVFYLDGAHSPESMEICARWFSHVTKEDRTVPSS-MVQSQSCGN 417
+ D E LVFYLDGAHSPESME CA+WFS K D SS + + S G+
Sbjct: 367 VPDQYT---ESRTSGDLVFYLDGAHSPESMEACAKWFSVAVKGDNQSGSSGHLVNGSAGS 423
Query: 418 S---------QKILLFNCMSVRDPMRLLPHLLDTSTQNGVHFEMALFVPNQSQYNKLGTN 468
S ++ILLFNCMSVRDP LLPHL + + GV+F+ ALFVPN S Y+K+GT
Sbjct: 424 SHDKWSNETCEQILLFNCMSVRDPNLLLPHLKNMCAKYGVNFKKALFVPNMSVYHKVGTA 483
Query: 469 SSAPAEPEQIDLSWQLSLQRVWQKLLHGDK-GMNNTNSSENSLVFESLPLAMEWLRTNAR 527
+ P Q+DLSWQ +LQ+VW+ L+ ++ G + S NS VF SLP+A++ LR
Sbjct: 484 ADLPENDPQVDLSWQFTLQKVWESLVQSERDGEKDGESDGNSEVFTSLPMAIKCLRDTVH 543
Query: 528 QNRS-TSFQVLVTGSLHLVGDVLRLVKK 554
++ S T FQVLVTGSLHLVGDVLRL++K
Sbjct: 544 ESSSATRFQVLVTGSLHLVGDVLRLIRK 571
>AT3G55630.3 | chr3:20636785-20639395 FORWARD LENGTH=493
Length = 492
Score = 592 bits (1527), Expect = e-169, Method: Compositional matrix adjust.
Identities = 291/501 (58%), Positives = 376/501 (75%), Gaps = 26/501 (5%)
Query: 59 YEDVMGRLSSLITQKVRAHSGNRGNQWDLMAHYLQILELEEPIARMKVIHVAGTKGKGST 118
Y++ + LSSLIT++ R S N+ +++ L+ HYL++LELE+ +++MK+IHVAGTKGKGST
Sbjct: 13 YQNTLDALSSLITKRGRLASNNQSHRFRLLFHYLKVLELEDAVSQMKIIHVAGTKGKGST 72
Query: 119 CTFTEAILRSCGFSTGLFTSPHLMDVRERFRLNGVDISEEKFLKYFWWCWNKLKEKTDDD 178
CTF E+ILR G TGLFTSPHL+DVRERFRLNG++IS+EKF+ YFW C++KLKEKT ++
Sbjct: 73 CTFAESILRCYGLRTGLFTSPHLIDVRERFRLNGIEISQEKFVNYFWCCFHKLKEKTSNE 132
Query: 179 IPMPTYFRFLALLAFKIFSAEQVDVAVLEVGLGGKFDATNVVEAPVVCGIASLGYDHMEI 238
+PMPTYF FLALLAFKIF+ EQVDV +LEVGLGG+FDATNV++ PVVCGI+SLGYDHMEI
Sbjct: 133 VPMPTYFCFLALLAFKIFTTEQVDVVILEVGLGGRFDATNVIQKPVVCGISSLGYDHMEI 192
Query: 239 LGNTLGEIAGEKAGIFKKGVPAYTAPQPEEAMIALKQRASELGVSLQVAHPLEPHQLKDQ 298
LG TL EIA EKAGIFK GVPA+T QP+EAM L ++AS+L V+LQV PL+ Q
Sbjct: 193 LGYTLAEIAAEKAGIFKSGVPAFTVAQPDEAMRVLNEKASKLEVNLQVVEPLD----SSQ 248
Query: 299 HLGLRGEHQYVNAGLAVALASTWLEKQGHVERIPLNRTDPLPDQFISGLSNASLQGRAQI 358
LGL+GEHQY+NAGLAVAL ST+L++ G ++ L++T+ LP++FISGLSNA L GRA I
Sbjct: 249 RLGLQGEHQYLNAGLAVALCSTFLKEIGIEDKNGLDQTNGLPEKFISGLSNAYLMGRAMI 308
Query: 359 ITDSQVNSGEEDKDCSLVFYLDGAHSPESMEICARWFSHVTKEDRTVPSSMVQSQSCGNS 418
+ DS++ +V+YLDGAHSPESME CA WFS K++ Q ++ S
Sbjct: 309 VPDSELPE-------EIVYYLDGAHSPESMEACAIWFSKQIKQN--------QERNQKRS 353
Query: 419 QKILLFNCMSVRDPMRLLPHLLDTSTQNGVHFEMALFVPNQSQYNKLGTNSSAPAEPEQI 478
++ILLFNCMSVRDP LLP L GV F+ A+FVPN S YN++G++++ E
Sbjct: 354 EQILLFNCMSVRDPSLLLPRLRSKCIDQGVDFKRAVFVPNVSVYNQVGSSTNVGTRVE-- 411
Query: 479 DLSWQLSLQRVWQKLLHGDKGMNNTNSS-----ENSLVFESLPLAMEWLRTNARQNRSTS 533
+SWQ LQR+W+ L G+ N+ + S E S VF SLP+A++WLR NARQ++
Sbjct: 412 SMSWQFGLQRIWESLARGEAKSNSKSDSKGKEEEKSFVFSSLPVAVDWLRDNARQSKQVR 471
Query: 534 FQVLVTGSLHLVGDVLRLVKK 554
FQVLVTGSLHLVGD+LR +KK
Sbjct: 472 FQVLVTGSLHLVGDLLRFIKK 492
>AT3G10160.1 | chr3:3139588-3143949 REVERSE LENGTH=626
Length = 625
Score = 530 bits (1366), Expect = e-151, Method: Compositional matrix adjust.
Identities = 278/544 (51%), Positives = 365/544 (67%), Gaps = 49/544 (9%)
Query: 59 YEDVMGRLSSLITQKVRAH----SGNRGNQWDLMAHYLQILELEEPIARMKVIHVAGTKG 114
Y+D M LS+LI+++ R GNR ++ + + YL+IL+LE+ I +KVIHVAGTKG
Sbjct: 83 YDDAMEALSTLISRRNRGDRTPTKGNR-DKLEQVVTYLKILDLEDKIKELKVIHVAGTKG 141
Query: 115 KGSTCTFTEAILRSCGFSTGLFTSPHLMDVRERFRLNGVDISEEKFLKYFWWCWNKLKEK 174
KGSTC F+EAILR+CGF TG+FTSPHL+DVRERFR++G+DISEEKFL+YFW CW LKEK
Sbjct: 142 KGSTCVFSEAILRNCGFRTGMFTSPHLIDVRERFRIDGLDISEEKFLQYFWECWKLLKEK 201
Query: 175 TDDDIPMPTYFRFLALLAFKIFSAEQVDVAVLEVGLGGKFDATNVVEAPVVCGIASLGYD 234
D + MP F+FL +LAFKIF E+VDVAV+EVGLGGK D+TNV++ PVVCGIASLG D
Sbjct: 202 AVDGLTMPPLFQFLTVLAFKIFVCEKVDVAVIEVGLGGKLDSTNVIQKPVVCGIASLGMD 261
Query: 235 HMEILGNTLGEIAGEKAGIFKKGVPAYTAPQPEEAMIALKQRASELGVSLQVAHPLEPHQ 294
HM+ILGNTL +IA KAGIFK +PA+T PQ EAM L++ A+ L V L+V PLEP +
Sbjct: 262 HMDILGNTLADIAFHKAGIFKPQIPAFTVPQLSEAMDVLQKTANNLEVPLEVVAPLEPKK 321
Query: 295 LKDQHLGLRGEHQYVNAGLAVALASTWLEKQGHVERIPLNRTD--PLPDQFISGLSNASL 352
L LGL G+HQ VNAGLAV+L+ WL++ G+ ++I N + +P F GL+ A L
Sbjct: 322 LDGVTLGLSGDHQLVNAGLAVSLSRCWLQRTGNWKKIFPNESKETEIPVAFCRGLATARL 381
Query: 353 QGRAQ----IITDSQVNSGEEDKDC-SLVFYLDGAHSPESMEICARWFSHVTKEDRTVPS 407
GRAQ +++D Q +S + C L+FYLDGAHSPESME C RWFS + D+++ +
Sbjct: 382 HGRAQVVHDVVSDPQDSSDSMETPCGDLIFYLDGAHSPESMEACGRWFSSAVRGDKSLST 441
Query: 408 SMVQSQSCGN--------SQKILLFNCMSVRDPMRLLPHLLDTSTQNGVHFEMALFVPNQ 459
++ G S++ILLFNCM VRDP LLP L+ T +G HF ALFVP+
Sbjct: 442 AVNGYMRHGEYGTDLNRVSKQILLFNCMEVRDPQVLLPKLVTTCASSGTHFSRALFVPSM 501
Query: 460 SQYNKLGTNSSA-PAEPEQIDLSWQLSLQRVWQKLLHG-DKGMNNTNSSE---------- 507
S YNK+ + +SA P++ + DL+WQ LQR+W+K + G D G+++T +
Sbjct: 502 STYNKVISGASAIPSDTRRKDLTWQFRLQRLWEKSIQGTDAGLDHTLKPDGITALPPHDF 561
Query: 508 -----------------NSLVFESLPLAMEWLRTNARQNRSTSFQVLVTGSLHLVGDVLR 550
+S V SLPL + WLR R+N S +VLVTGSLHLVGDVLR
Sbjct: 562 LCGDAPQCGGPAGTPVTSSAVMPSLPLTINWLRDCVRRNPSLKLEVLVTGSLHLVGDVLR 621
Query: 551 LVKK 554
L+K+
Sbjct: 622 LLKR 625
>AT5G41480.1 | chr5:16595967-16598523 FORWARD LENGTH=531
Length = 530
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 215/501 (42%), Gaps = 86/501 (17%)
Query: 85 WDLMAHYLQILELEEPIARMKVIHVAGTKGKGSTCTFTEAILRSCGFSTGLFTSPHLMDV 144
+DL +L L P + KV+HVAGTKGKGST F ILR+ G+S G ++SPH++ +
Sbjct: 75 FDLGRMKRLMLRLRNPHYKYKVVHVAGTKGKGSTSAFLSNILRAGGYSVGCYSSPHILSI 134
Query: 145 RERFRLNGVDISEEKFLKYFWWCWNKLKEKTDDDIPMPTYFRFLALLAFKIFSAEQVDVA 204
+ER NG +S F+ L++ ++ ++F L +AF +F E VD+A
Sbjct: 135 KERISCNGEPVSASTLNDLFYSVKPILEQSIQEENGSLSHFEILTGIAFSLFEKENVDIA 194
Query: 205 VLEVGLGGKFDATNVVEAPVVCG--IASLGYDHMEILGNTLGEIAGEKAGIFKKGVPAYT 262
V+E GLGG DATNV+E+ + I ++G +HM LG +L IA K+GI K G P
Sbjct: 195 VIEAGLGGARDATNVIESSNLAASVITTIGEEHMAALGGSLESIAEAKSGIIKHGRPVVL 254
Query: 263 A----PQPEEAMIALKQR-------ASELGVSLQVAHPLEPH------------------ 293
P E + + AS +G S + + +
Sbjct: 255 GGPFLPHIEGILRSKAASVSSSVILASNIGSSSSIKGIINKNGIGLCQSCDIVIQNEKDD 314
Query: 294 ----QLKDQHLGLRGEHQYVNAGLAVALASTWLEKQGHVERIPLNRTDPLPDQFIS-GLS 348
+L D +L + G HQ NA A + S L QG + D+ I GL
Sbjct: 315 QPIVELSDVNLRMLGHHQLQNAVTATCV-SLCLRDQG---------CGRVTDEAIRIGLE 364
Query: 349 NASLQGRAQIITDSQVNSGEEDKDCSLVFYLDGAHSPESMEICARWFSHVTKEDRTVPSS 408
N L GR+Q +T + E LDGAH+ ES AR + K+D P
Sbjct: 365 NTRLLGRSQFLTPKE---AETLLLPGATVLLDGAHTKES----ARALKEMIKKD--FPEK 415
Query: 409 MVQSQSCGNSQKILLFNCMSVRDPMRLLPHLLDTSTQNGVHFEMALFVPNQSQYNKLGTN 468
+ + + S +D + LL +G+ E + K+ +
Sbjct: 416 RL----------VFVVAMASDKDHVSFAKELL-----SGLKPEAVILTEADIGGGKIRST 460
Query: 469 SSAPAEPEQIDLSWQLSLQRVWQKLLHGDKGMNNTNSSENSLVFESLPLAMEWLRTNARQ 528
S+ L+ W K + G + +SEN V SL LA + L +
Sbjct: 461 ESSV-------------LKESWIKAAD-ELGSRSMEASENKTVLGSLKLAYKILSDDT-- 504
Query: 529 NRSTSFQVLVTGSLHLVGDVL 549
S S V+VTGSLH+V VL
Sbjct: 505 TSSDSGMVIVTGSLHIVSSVL 525
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,905,117
Number of extensions: 465520
Number of successful extensions: 1058
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1045
Number of HSP's successfully gapped: 5
Length of query: 554
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 450
Effective length of database: 8,255,305
Effective search space: 3714887250
Effective search space used: 3714887250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)