BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0109300 Os03g0109300|AK099538
(211 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214 334 2e-92
AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216 330 2e-91
AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240 327 3e-90
AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218 317 3e-87
AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214 306 4e-84
AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229 294 3e-80
AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217 285 1e-77
AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230 264 3e-71
AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144 162 1e-40
>AT2G28305.1 | chr2:12081186-12084307 FORWARD LENGTH=214
Length = 213
Score = 334 bits (857), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 157/202 (77%), Positives = 181/202 (89%)
Query: 10 ESRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVARGIDLVYGGGSIGLMGLVSQAVYDGG 69
ES+FKR CVFCGSS GNK +Y+DAA++L ELV+R IDLVYGGGSIGLMGL+SQAV++GG
Sbjct: 4 ESKFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGG 63
Query: 70 RHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQRKAEMARQSDAFIALPGGYGTLEELLEV 129
RHVIGVIPKTLM EI GETVGEV+ V+DMHQRKAEMA+ SDAFIALPGGYGTLEELLEV
Sbjct: 64 RHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEV 123
Query: 130 ITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSARRIIVSAPTAQELMDKLE 189
ITWAQLGIH KPVGLLNV+GYYNSLL+FID+AVEEGFISP+AR IIVSAP+A+EL+ KLE
Sbjct: 124 ITWAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKLE 183
Query: 190 EYVPYHDRVASGLNWETGHLGF 211
+YVP H++VAS +WE +G
Sbjct: 184 DYVPRHEKVASKKSWEMEQIGL 205
>AT3G53450.1 | chr3:19812977-19815430 REVERSE LENGTH=216
Length = 215
Score = 330 bits (847), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/211 (75%), Positives = 179/211 (84%)
Query: 1 MRXXXXXXXESRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVARGIDLVYGGGSIGLMGL 60
M +S+F R CVFCGSSQG K++Y+DAAVDL ELV R IDLVYGGGSIGLMGL
Sbjct: 1 MEVNNETMQKSKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGL 60
Query: 61 VSQAVYDGGRHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQRKAEMARQSDAFIALPGGY 120
VSQAV+DGGRHVIGVIPKTLM E+ GETVGEVR V+DMHQRKAEMAR SDAFIALPGGY
Sbjct: 61 VSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGY 120
Query: 121 GTLEELLEVITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSARRIIVSAPT 180
GTLEELLEVITWAQLGIH KPVGLLNVDGYYNSLL+FID+AVEEGFIS +AR+II+SAPT
Sbjct: 121 GTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPT 180
Query: 181 AQELMDKLEEYVPYHDRVASGLNWETGHLGF 211
A+EL+ KLEEY P H+ VA+ L WE + +
Sbjct: 181 AKELVKKLEEYSPCHESVATKLCWEIERIDY 211
>AT2G37210.2 | chr2:15624253-15626834 REVERSE LENGTH=240
Length = 239
Score = 327 bits (838), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 160/226 (70%), Positives = 181/226 (80%), Gaps = 24/226 (10%)
Query: 10 ESRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVARGIDLVYGGGSIGLMGLVSQAVYDGG 69
+S+F+R CVFCGSSQG K++Y+DAAVDL ELV+R IDLVYGGGSIGLMGLVSQAV+DGG
Sbjct: 10 KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGG 69
Query: 70 RHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQRKAEMARQSDAFIALP------------ 117
RHVIG+IPKTLM E+ GETVGEVR V+DMHQRKAEMA+ SDAFIALP
Sbjct: 70 RHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPEENNLVKLKNML 129
Query: 118 ------------GGYGTLEELLEVITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEG 165
GYGTLEELLEVITWAQLGIH KPVGLLNVDGYYNSLL+FID+AVEEG
Sbjct: 130 SWSSCSVKATLKSGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEG 189
Query: 166 FISPSARRIIVSAPTAQELMDKLEEYVPYHDRVASGLNWETGHLGF 211
FISP+AR IIVSAPTA+EL+ KLEEY P H+RVA+ L WE +G+
Sbjct: 190 FISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWEMERIGY 235
>AT5G06300.1 | chr5:1922042-1925278 REVERSE LENGTH=218
Length = 217
Score = 317 bits (812), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/196 (77%), Positives = 171/196 (87%)
Query: 10 ESRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVARGIDLVYGGGSIGLMGLVSQAVYDGG 69
+SRFKR CVFCGSS G K +Y++AA+ L ELV R IDLVYGGGS+GLMGLVSQAV+ GG
Sbjct: 5 KSRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGG 64
Query: 70 RHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQRKAEMARQSDAFIALPGGYGTLEELLEV 129
RHV+GVIPKTLM EI GET+GEV+ V+DMHQRKAEMARQ+DAFIALPGGYGTLEELLEV
Sbjct: 65 RHVLGVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEELLEV 124
Query: 130 ITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSARRIIVSAPTAQELMDKLE 189
ITWAQLGIH KPVGLLNVDGYYNSLLTFID+AV+EGFISP ARRIIVSAP A+EL+ +LE
Sbjct: 125 ITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVRQLE 184
Query: 190 EYVPYHDRVASGLNWE 205
EY P D + S L W+
Sbjct: 185 EYEPEFDEITSKLVWD 200
>AT2G35990.1 | chr2:15114070-15116647 FORWARD LENGTH=214
Length = 213
Score = 306 bits (785), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 144/197 (73%), Positives = 168/197 (85%)
Query: 10 ESRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVARGIDLVYGGGSIGLMGLVSQAVYDGG 69
+SRF+R CVFCGSS GNKTTY DAA+ LA +LV R IDLVYGGGS+GLMGL+SQAV+DGG
Sbjct: 5 KSRFRRICVFCGSSSGNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAVHDGG 64
Query: 70 RHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQRKAEMARQSDAFIALPGGYGTLEELLEV 129
RHV+G+IPK+L EI GE++GEV VS MHQRKAEM RQ+DAFIALPGGYGT EELLEV
Sbjct: 65 RHVLGIIPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALPGGYGTFEELLEV 124
Query: 130 ITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSARRIIVSAPTAQELMDKLE 189
ITW+QLGIH KPVGLLNVDG+Y+SLLTFID+AV+EGF+S +ARRIIVSAP A +L+ LE
Sbjct: 125 ITWSQLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLLQLLE 184
Query: 190 EYVPYHDRVASGLNWET 206
EYVP HD S + W+
Sbjct: 185 EYVPKHDDFVSKMVWDN 201
>AT4G35190.1 | chr4:16746724-16748090 FORWARD LENGTH=229
Length = 228
Score = 294 bits (752), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 141/196 (71%), Positives = 160/196 (81%)
Query: 10 ESRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVARGIDLVYGGGSIGLMGLVSQAVYDGG 69
+SRFKR CVFCGSS G + Y DAA DLA+ELV R ++LVYGGGSIGLMGLVSQAV++ G
Sbjct: 5 KSRFKRVCVFCGSSSGKRECYSDAATDLAQELVTRRLNLVYGGGSIGLMGLVSQAVHEAG 64
Query: 70 RHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQRKAEMARQSDAFIALPGGYGTLEELLEV 129
HV+G+IP+TLM EI GET GEV V+DMH+RKAEMAR SD FIALPGGYGTLEELLEV
Sbjct: 65 GHVLGIIPRTLMDKEITGETYGEVIAVADMHERKAEMARHSDCFIALPGGYGTLEELLEV 124
Query: 130 ITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSARRIIVSAPTAQELMDKLE 189
I WAQLGIH KPVGLLNVDGYYN LLTFID+AV++GFI PS R I VSAP A+EL+ KLE
Sbjct: 125 IAWAQLGIHDKPVGLLNVDGYYNYLLTFIDKAVDDGFIKPSQRHIFVSAPNAKELVQKLE 184
Query: 190 EYVPYHDRVASGLNWE 205
Y P +D V + WE
Sbjct: 185 AYKPVNDGVIAKSRWE 200
>AT5G11950.1 | chr5:3855072-3856815 FORWARD LENGTH=217
Length = 216
Score = 285 bits (729), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 133/200 (66%), Positives = 163/200 (81%)
Query: 11 SRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVARGIDLVYGGGSIGLMGLVSQAVYDGGR 70
SRF++ CVFCGS G++ + DAA++L ELV R IDLVYGGGS+GLMGL+S+ VY+GG
Sbjct: 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGL 66
Query: 71 HVIGVIPKTLMTPEIIGETVGEVRPVSDMHQRKAEMARQSDAFIALPGGYGTLEELLEVI 130
HV+G+IPK LM EI GETVG+VR V+DMH+RKA MA++++AFIALPGGYGT+EELLE+I
Sbjct: 67 HVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMI 126
Query: 131 TWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSARRIIVSAPTAQELMDKLEE 190
TW+QLGIH K VGLLNVDGYYN+LL D VEEGFI P AR I+VSAPTA+ELM+K+EE
Sbjct: 127 TWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKMEE 186
Query: 191 YVPYHDRVASGLNWETGHLG 210
Y P H VAS +W+ LG
Sbjct: 187 YTPSHMHVASHESWKVEELG 206
>AT5G03270.1 | chr5:781870-783997 FORWARD LENGTH=230
Length = 229
Score = 264 bits (674), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 158/203 (77%), Gaps = 17/203 (8%)
Query: 11 SRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVARGIDLVYGGGSIGLMGLVSQAVYDGGR 70
SRFK CVFCGSS GNK +Y+DAA+DLAKELV R IDLVYGGGSIGLMGLVSQAV+DGGR
Sbjct: 16 SRFKSICVFCGSSNGNKASYQDAAIDLAKELVMRKIDLVYGGGSIGLMGLVSQAVHDGGR 75
Query: 71 --------------HVIGVIPKTLMTPEIIGETVGEVRPVSDMHQRKAEMARQSDAFIAL 116
H + V + ++ GETVGEV+ V+DMHQRKA MA+ SDAFI L
Sbjct: 76 HNNNNNGNDDALFCHSVNV---SQTNSKLTGETVGEVKEVADMHQRKAVMAKHSDAFITL 132
Query: 117 PGGYGTLEELLEVITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSARRIIV 176
PGGYGTLEELLEVITWAQLGIH KPVGLLNVDGYY++LL FID+AVEEGFI P+AR IIV
Sbjct: 133 PGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYDALLLFIDKAVEEGFILPTARHIIV 192
Query: 177 SAPTAQELMDKLEEYVPYHDRVA 199
SAPTA+EL KLE + DR++
Sbjct: 193 SAPTARELFIKLELNMVSLDRIS 215
>AT5G26140.1 | chr5:9130796-9131636 FORWARD LENGTH=144
Length = 143
Score = 162 bits (410), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Query: 85 IIGETVGEVRPVSDMHQRKAEMARQSDAFIALPGG-YGTLEELLEVITWAQLGIHHKPVG 143
I GETVGEVR VSDMH+RKA MA+++ AFIAL G Y T+EELLE+ITWAQLGIH K VG
Sbjct: 6 ISGETVGEVRIVSDMHERKATMAQEAGAFIALLGERYETMEELLEMITWAQLGIHKKTVG 65
Query: 144 LLNVDGYYNSLLTFIDQAVEEGFISPSARRIIVSAPTAQELMDKLEEYVPYHDRVASGLN 203
LLNVDGYYN+LL F D VEEGFI A I+VSAP+A+ELM+K+E Y P H +AS +
Sbjct: 66 LLNVDGYYNNLLAFFDTGVEEGFIKQGACNIVVSAPSARELMEKMELYTPSHKYIASHQS 125
Query: 204 WETGHLG 210
W+ LG
Sbjct: 126 WKVEPLG 132
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.138 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,600,432
Number of extensions: 194426
Number of successful extensions: 475
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 472
Number of HSP's successfully gapped: 9
Length of query: 211
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 117
Effective length of database: 8,529,465
Effective search space: 997947405
Effective search space used: 997947405
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 109 (46.6 bits)