BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0816400 Os02g0816400|AK101167
(934 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G28760.1 | chr4:14208640-14211811 FORWARD LENGTH=925 266 3e-71
AT5G43880.1 | chr5:17639975-17642848 REVERSE LENGTH=837 175 1e-43
AT2G20240.1 | chr2:8727778-8730086 REVERSE LENGTH=714 175 1e-43
AT3G53540.1 | chr3:19846805-19850670 REVERSE LENGTH=925 96 1e-19
>AT4G28760.1 | chr4:14208640-14211811 FORWARD LENGTH=925
Length = 924
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 288/986 (29%), Positives = 445/986 (45%), Gaps = 149/986 (15%)
Query: 20 PFPGCLGRMINMFDLSNGVVATKMLTEKAHRDVSPAGKDRGNAFKMAIGPFSSQIEDKKR 79
P PGCLG+M+N+FDL V K+LT+K H D S + R + +M GP K
Sbjct: 15 PVPGCLGKMVNLFDLGIAVNGNKLLTDKPHLDGSSLSRSRSDVTRMP-GP------SYKG 67
Query: 80 DSQPRKQSPTKRLSSPTKRSGEAPVKLLMEQDMWKEGMSGEEPLNVVARLMGLNDAAGHQ 139
S+ R S+ +K SG P+K L+ ++M KE + P NVVA+LMGL
Sbjct: 68 HSEAELIMSDLRRSASSKLSG-TPMKKLIAREMSKEVEHKQSPTNVVAKLMGLETLPQTH 126
Query: 140 SDLKSGKR----------------SDKEYRSGGFDENSRNLRPKKDSKGHPNQKAGTHSE 183
+ + + +D E + + + SR + ++ P QK + S
Sbjct: 127 QETATQRSKSRSNSHSSLNHSMTSTDNEVQK--YQDFSREFKDVYETWQSP-QKV-SRSR 182
Query: 184 PCSGFSDQTLRMNSSRNKHQGKEPSCEKRMTLVREKFAEAKRLATDEKLLHTKEFQEALQ 243
CS K + E + EK+M LVR+KF+EAKRL TD+ L +KEFQ+AL+
Sbjct: 183 DCSP------------RKGRYDESTTEKQMALVRQKFSEAKRLVTDDSLHQSKEFQDALE 230
Query: 244 FLSSNKDLFLKFLDEPNPLLSHNNYEFQPDTPPSETKQITILKPSDSIKRNGNTLVGR-- 301
LSSNKDLF++FL E N N +F P SE K+IT+L+PS + + + GR
Sbjct: 231 VLSSNKDLFVQFLQESNSFSQQNLSDFHHVPPHSEAKRITVLRPSKAGETEKYVVQGRRN 290
Query: 302 ----QLYSDGDESE-GNRCRRHQSLSVS-PTNSTLSEPTRIVVLKPGLVKSQEPKILRXX 355
+L S E+ GNR + S V+ T +PTRIVVLKP L KS + K +
Sbjct: 291 KQVKKLASSSQETGWGNRDLGYPSPYVNRGTEEHTVQPTRIVVLKPSLGKSLDIKAVSSS 350
Query: 356 XXXXXXXXXXXXXXXXVDETVPSSRRLAKEITWQMRMRLKDKQDEENLLSYEFHDIYIGD 415
D ++ +AKEIT Q+R L E S + YIGD
Sbjct: 351 QSSPRGLHSRGYFDEPED---VETKEVAKEITRQVRENLMGHHRNETQSSSVLSNGYIGD 407
Query: 416 D-SFSKSEVENAKEVSGEISEDLEFGTPTSGRSWDFLSRSGSPYSASCSSQTSHRREPSV 474
D SF+KS+ E+ + G +S D E +P S SWD +R S +S S S+ S E SV
Sbjct: 408 DSSFNKSDNED---LVGNLS-DSEIMSPASRHSWDCPNRFDSLFSPSSFSRASFSPESSV 463
Query: 475 VREAKKRIFERLSIVSSTVGGEEEREARRSMGTLGEMLTIPEVKKDQEVFGG-------- 526
REAKKR+ ER +++S + + + R+ TLGEML + E K E G
Sbjct: 464 CREAKKRLSERWALMSVSGRTQPLKHVSRTSSTLGEMLALTETKVTTESGEGSYEIVPAT 523
Query: 527 ------VTLENPSPEMDSEEPFLCLPRSRSVPISLSFGGTELNGVATGCQEAEKEKNRKS 580
+T + EM S+ L RS+SV G T + G ++ Q + S
Sbjct: 524 RVSTSCITSDLSQVEMASDS-LNILARSKSVSDVRLNGETSVLG-SSKVQAPRELTKTGS 581
Query: 581 LSFREKVSSL-FSKNRKVARGKLDPSGIPSTDDRLKHGNSATVNDFSENADHSALDNPLN 639
L KVS+L F KN K ++ K D S S A +P+
Sbjct: 582 LKSSWKVSNLFFFKNNKASKEKRDASQCSS-------------------MSQLAAPSPVT 622
Query: 640 CTIQNVDDISMPRLMASSWHMNDMENMPAKDISSIPVIGAPGIFGESQDQPSPVSVLDGP 699
T + +D P + ++ + P A G E+QDQPSP+SVL P
Sbjct: 623 LTGKTSEDCVFPIDCLPPVSSEQQSIILGEEEVTTPKPLATGNTSENQDQPSPISVLFPP 682
Query: 700 FLSDNSRSLLCSSESF--------ITASPQALSRSPLIGSFSRSLSWEDPPLEVMSPNSL 751
F + + CS + ++ + +SP IGS +R LSW+D +
Sbjct: 683 FEEECASIPECSGSTKHWSSQGDEMSLKSNLIDKSPPIGSIARLLSWDDDSC------TD 736
Query: 752 RLSRLFSKADEDQDSLTFIQKLVCSAGIDREGCMLS------------GPLELYLLEKFS 799
+++ E++D FI+ ++ +AG GC++S PL+ L +K++
Sbjct: 737 NIAKPAMGVHEEEDWHLFIEMILTAAGFS-SGCIVSHDPIMSRWHMPNSPLDPSLRDKYT 795
Query: 800 D--------YQEEGTKLRERRSKEKFLFDAVNEALTELTWTAELMAYPLGRSSSLERKDC 851
+ + EG K R++RS K +FD +N ++E T T +
Sbjct: 796 NPDNNNIKEFIHEG-KRRQQRSTRKLIFDRINSIVSETTTT----------------RTG 838
Query: 852 ENAFSNSAADEIWRVIRNWSILD---KYPPGETIERN-LLVEMILKREVLEAASSDTTRL 907
+ + +W +++W + D K GE ++ N L E ++K E++ + + ++
Sbjct: 839 NGSLHFDLVEHVWAQLKDW-VSDEPSKRDSGEDMDANSLAAESLVKDEIVGRTWTHSLQV 897
Query: 908 ETFELTSMVCTMVLEDLIADAVVDLS 933
E + + +L++L+ +AV+DL+
Sbjct: 898 EIDDFGIEIEKRLLQELVEEAVIDLT 923
>AT5G43880.1 | chr5:17639975-17642848 REVERSE LENGTH=837
Length = 836
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 274/947 (28%), Positives = 407/947 (42%), Gaps = 220/947 (23%)
Query: 23 GCLGRMINMFDLSNGVVATKMLTEKAHRDVSPAGKDRGNAFKMAIGPFSSQIEDKKRDSQ 82
GCL RM+N+FD K+LTEK H D G +GN F QIEDK
Sbjct: 13 GCLARMVNLFDFGTVGNGKKLLTEKPHFD---HGSIKGNQF--------DQIEDK----- 56
Query: 83 PRKQSPTKRLSSPTKRSGEA---PVKLLMEQDMWKEGMSGEEPLNVVARLMGLNDAAGHQ 139
R+G P+K+L+EQ+M KE N+VA+LMGL+ Q
Sbjct: 57 ------------VDVRNGGVNGTPMKMLLEQEMSKEMEVKLSSTNLVAKLMGLDSFPQTQ 104
Query: 140 SDLKSGKRSDKEYRSGGFDENSRNLRPKKDSKGHPNQKAGTHSEPCSGFSDQTLRMNSSR 199
S +S Y S +P+ +++ +H E + + S
Sbjct: 105 SAPRS-------YSS----------KPRL-------KRSLSHGEYKNVYEIWQKEGELSS 140
Query: 200 NKHQGKEPSCEKRMTLVREKFAEAKRLATDEKLLHTKEFQEALQFLSSNKDLFLKFLDEP 259
N G E +K+M +VREKF EAKRL TD++L H+KEFQEA++ LSSNK+LFL+FL E
Sbjct: 141 N---GVEGLSKKKMDIVREKFLEAKRLVTDDELRHSKEFQEAMEVLSSNKELFLEFLQES 197
Query: 260 NPLLSHNNYEFQPDTPPS--ETKQITILKPSDSI--KRNGNTLVGRQLYSDGDESEGNRC 315
N SH+ + FQ PP+ ++K+ITILKPS ++ ++ GN + S D S+ +
Sbjct: 198 NNFFSHHLHSFQSTDPPTSEKSKRITILKPSKTVADEKFGNEPA---IESSRDGSKSGKG 254
Query: 316 RRHQSLSVSPTNSTLSEPTRIVVLKP-GLV--KSQEPKILRXXXXXXXXXXXXXXXXXXV 372
V T + TRIVVLKP G V S P R
Sbjct: 255 LDFFKWPVEEEYPT-KQSTRIVVLKPNGQVTKASSCPTSPRGFEGRE------------- 300
Query: 373 DETVPSSRRLAKEITWQMRMRLKDKQDEENLLSYEFHDIYIGDDSFSKSEVENAKEVSGE 432
SR +A+ + Q+ LK EE L S F + YI DDS S
Sbjct: 301 ------SRDVARRVKSQI---LK----EETLQSSVFSNGYICDDS------------SLN 335
Query: 433 ISEDLEFGTPTSGRSWDFLSRSGSPYSASCSSQTSHRRE-PSVVREAKKRIFERLSIVSS 491
D E +P S SWD++++ SP+S+S S+ S E SV REAKKR+ ER +++++
Sbjct: 336 DYADSEIMSPVSRHSWDYINKYDSPFSSSPFSRASGSPESSSVCREAKKRLSERWALMAA 395
Query: 492 TVGGEEEREARRSMG---TLGEMLTIPEVKKD-----QEVFGGVTLENP----------- 532
+E + G +LG+ML +P++++D +E G E P
Sbjct: 396 ANENLQEAKVIEKKGSNISLGDMLALPDLREDLITEEEETSNGNEQEGPKVSASCFDGNF 455
Query: 533 SPEMDSEEPFLCLPRSRSVP-ISLSFGGTELNGV--ATGCQEAEKEKNRKSL--SFREKV 587
S E +P L RS+S+P S S G L+ + + E+ KSL S + KV
Sbjct: 456 SREEGKLKPPKGLTRSKSLPESSTSLGHKSLDSSNKSKSSRVPEELTKSKSLKWSLKGKV 515
Query: 588 SS-LFSKNRKVARGKLDPSGIPSTDDRLKHGNSATVNDFSENADHSALDNPLNCTIQNVD 646
S+ LFS+++K ++ + D R + A+V+
Sbjct: 516 SNFLFSRSKKASKERSYEESPEILDSRCNNEYDASVS----------------------- 552
Query: 647 DISMPRLMASSWHMNDMENMPAKDISSIPVIGAPGIFGES---QDQPSPVSVL------- 696
R+M S I P IFG S +D+PSP+SVL
Sbjct: 553 ----ARIMTSR--------------EGGLSITKPTIFGNSSEWRDEPSPISVLETSFDEE 594
Query: 697 DGPFLSDNSRSLLCSSESFITASPQALSRSPLIGSFSRSLSWEDPPLEVMSPNSLRLSRL 756
DG F + + + SS S L +SP IGS R+LS++D + + +
Sbjct: 595 DGIFFNSSILNRSSSSLEREMKS-NLLGKSPPIGSIGRTLSFDDSTVARCYSSKRSTT-- 651
Query: 757 FSKADEDQDSLTFIQKLVCSAGIDR-EGCMLS------GPLELYLLEKFSDYQEEGTKLR 809
S DE++D I L+ +A +D +LS PL+ L ++D E+ R
Sbjct: 652 -SARDEEEDLRLLINTLLSAADLDAISDNLLSKWHSSESPLDPSLRNSYADSTEQK---R 707
Query: 810 ERRSKEKFLFDAVNEALTELTWT--------AELMAYPLGRSSSLERKDCENAFSNSAAD 861
+ + +FD VN L ELT + L PLG ++C
Sbjct: 708 LGSNVKNLVFDLVNTLLLELTPSYLGPRSSPMILSGKPLGVYVINRMQEC---------- 757
Query: 862 EIWRVIRNWSILDKYPPGETIERNLLVEMILKREVLEAASSDTTRLE 908
+ N + D++ + +L V +++ EV E S ++ RLE
Sbjct: 758 ----LTGNGRVEDRWWDEDGDLSSLAVNKVVRIEVAEIGSQESLRLE 800
>AT2G20240.1 | chr2:8727778-8730086 REVERSE LENGTH=714
Length = 713
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 215/733 (29%), Positives = 328/733 (44%), Gaps = 159/733 (21%)
Query: 210 EKRMTLVREKFAEAKRLATDEKLLHTKEFQEALQFLSSNKDLFLKFLDEPNPLLSHNNYE 269
+K+M LVR KF EAK L TD++L + E QEALQ LSSNKDLF+KFL E N L + +
Sbjct: 99 DKQMDLVRRKFMEAKHLVTDDRLHRSSELQEALQVLSSNKDLFVKFLQESNSLFPQHLSD 158
Query: 270 FQPDTPPSETKQITILKPSDSIKRNGNTLVGRQLYSDGDESEGNRCRRHQSLSVSPTNST 329
FQP P + K+IT+L+PS ++ V + L D ++ SL+
Sbjct: 159 FQPVPPHPDAKRITVLRPSKAVG------VQKCLAEDS--------KKPASLNQETGWID 204
Query: 330 LSEPTRIVVLKPGLVKSQEPKILRXXXXXXXXXXXXXXXXXXVDETVPS-SRRLAKEITW 388
+PTRIVVLKP KS + K + DE + +R +AKEIT
Sbjct: 205 AVQPTRIVVLKPSPGKSLDIKAI-------------ASSPPYFDEAGDAETREVAKEITR 251
Query: 389 QMRMRLKDKQDEENLLSYEFH---DIYIGDD-SFSKSEVENAKEVSGEISEDLEFGTPTS 444
Q+R ++ E L S + Y+GDD S ++S N + + G I+ E +P+S
Sbjct: 252 QIRETVEGHCRNETLSSSSSSVLSNGYMGDDCSLNRS---NYEYLVGNITNS-EIMSPSS 307
Query: 445 GRSWDFLSRSGSPYSASCSSQTSHRREPSVVREAKKRIFERLSIVSSTVGGEEEREARRS 504
SWD ++ SP+S+S S+ S + SV REAKKR+ ER +++S ++ + +
Sbjct: 308 RHSWDCANKFESPFSSSSLSRVSFSPDSSVYREAKKRLSERWAMMSLNGDTQQPKNFPKV 367
Query: 505 MGTLGEMLTIPEVKKDQEVFGGVTLENPSPEMDSEEPFLC-----------------LPR 547
LGE+L + E K V G + E + ++ C L R
Sbjct: 368 STALGEVLALSETK----VPTGSSEETNKVKQETRRSISCIGSGLDQVESTSDSLNILER 423
Query: 548 SRSVPISLSFGGTELNGVATGCQEAEKEKNRKSLSFREKVSSL-FSKNRKVARGKLDPSG 606
SRSVP LNG + Q ++ +SL KVSSL F +N+K + D +
Sbjct: 424 SRSVP------EIRLNGGTSKAQAPQELTESRSLKSSWKVSSLFFFRNKKSNK---DKTF 474
Query: 607 IPSTDDRLKHGNSATVNDFSENADHSALDNPLNCTIQNVDDISMPRLMASSWHMNDMENM 666
PS + A H D R+ S D+EN
Sbjct: 475 APS-----------------QLAIHR-------------DAFQEQRIFTSE---GDVEN- 500
Query: 667 PAKDISSIPVIGAPGIFGESQDQPSPVSVLDGPFLSDNSRSLL--CSSESFITASPQALS 724
E+QDQPSPVSVL F + S S+ + ++ +
Sbjct: 501 ------------------ENQDQPSPVSVLQPAFEEECSGSVKPKTTQGEEMSLKSNLID 542
Query: 725 RSPLIGSFSRSLSWEDPPLEVMSPNSLRLSRLFSKADEDQDSLTFIQKLVCSAGIDREGC 784
+SP IG+ +R L+WED S ++ + +ED+D FI+ L+ ++G
Sbjct: 543 KSPPIGTIARILAWEDESYTDTSKPAMGI-------EEDEDWYGFIKTLLTASGFSGSDS 595
Query: 785 M------LSGPLELYLLEKFSDYQEEGTKLRERRSKEKFLFDAVNEALTELTWTAELMAY 838
+ L PL+ L +KF++ +E K R++RS K +FD VN +TE T
Sbjct: 596 LMTRWHSLESPLDPSLRDKFAN--KELIKRRKQRSNRKLVFDCVNAIITETT-------- 645
Query: 839 PLGRSSSLERKDCENAFSNSAADEIWRVIRNWSILDK-----YPPGETIERNLL---VEM 890
S+L F + + +W ++ W++ D+ + G +E N L +E+
Sbjct: 646 -----STLAHTGLTKGF--NMLEHVWTELQEWAVNDEVAGKMWSYGLQVEMNNLGIEIEV 698
Query: 891 ILKREVLEAASSD 903
IL +E++E A D
Sbjct: 699 ILLQELVEEAVFD 711
>AT3G53540.1 | chr3:19846805-19850670 REVERSE LENGTH=925
Length = 924
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 129/272 (47%), Gaps = 46/272 (16%)
Query: 102 APVKLLMEQDMWKEGMSGEEPLNVVARLMGLNDAAGHQSDLKSGKR-SDKEYRSGGFDEN 160
P+K L+ Q+M K+ S + +++ARLMGL+ S K K +++ RSGG
Sbjct: 62 VPMKSLLAQEMSKQKESKKRSPSIIARLMGLDVLPSQSSSHKQQKSMENQQGRSGG---- 117
Query: 161 SRNLRPKKDSKGHPNQKAGTHSEPCSGFSD-----QTLRMNSSRN-KHQGKEPS--CEKR 212
G + G S+ F D S+RN HQG+ + +
Sbjct: 118 -----------GTSYKSLGKRSKGEQKFKDVFEVLDAKMAESNRNLYHQGRVNANLTQAE 166
Query: 213 MTLVREKFAEAKRLATDEKLLHTKEFQEALQFLSSNKDLFLKFLDEPNPLLSHNNYEFQ- 271
M +R+KF EAKRL+TD+KL H+KEF +AL+ L SNKDL LKFL P+ L + + ++ Q
Sbjct: 167 MAFIRQKFMEAKRLSTDDKLRHSKEFNDALEALDSNKDLLLKFLQHPDSLFTKHLHDLQS 226
Query: 272 -PDTP----------PSETKQITILKPSDSIKRNGNTLVGRQLYSDGDESEGNRCR---R 317
P P P+ + + LK + + R+ R + +G G R R
Sbjct: 227 TPHKPQYSQAPSLKSPNSQRHVDSLK-TQKVDRDLLRKSHRSPHRNGGGGSGCPSRSHTR 285
Query: 318 HQSL-SVSPTNSTLS-----EPTRIVVLKPGL 343
H S ++ N L +PT+IVVLKP L
Sbjct: 286 HASYDTIDLPNEELRKRSELQPTKIVVLKPNL 317
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.129 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 20,505,880
Number of extensions: 923677
Number of successful extensions: 2414
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 2394
Number of HSP's successfully gapped: 7
Length of query: 934
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 826
Effective length of database: 8,145,641
Effective search space: 6728299466
Effective search space used: 6728299466
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)