BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0811000 Os02g0811000|AK111446
(248 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G31160.1 | chr2:13277903-13278562 FORWARD LENGTH=220 229 1e-60
AT3G23290.2 | chr3:8326958-8328010 FORWARD LENGTH=196 223 5e-59
AT1G07090.1 | chr1:2174202-2174792 REVERSE LENGTH=197 221 4e-58
AT5G58500.1 | chr5:23645535-23646083 REVERSE LENGTH=183 208 2e-54
AT5G28490.1 | chr5:10454541-10455113 REVERSE LENGTH=191 206 8e-54
AT3G04510.1 | chr3:1215812-1216417 REVERSE LENGTH=202 201 3e-52
AT2G42610.1 | chr2:17748005-17748538 FORWARD LENGTH=178 193 8e-50
AT1G78815.1 | chr1:29632054-29632641 REVERSE LENGTH=196 176 1e-44
AT4G18610.1 | chr4:10250794-10251369 FORWARD LENGTH=192 164 4e-41
AT1G16910.1 | chr1:5785373-5785867 FORWARD LENGTH=165 162 2e-40
>AT2G31160.1 | chr2:13277903-13278562 FORWARD LENGTH=220
Length = 219
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 116/131 (88%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYE+QKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFL+Y+DQFGKTKVHT +C FYGH
Sbjct: 54 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHP 113
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDALIGRLRAA+EENGG PE NPFGARAVRLYLREVR+ Q++AR
Sbjct: 114 NPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKAR 173
Query: 200 GISYEKKKRKK 210
G+SYEKKKRK+
Sbjct: 174 GVSYEKKKRKR 184
>AT3G23290.2 | chr3:8326958-8328010 FORWARD LENGTH=196
Length = 195
Score = 223 bits (569), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 103/125 (82%), Positives = 113/125 (90%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYE+QKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFL+Y+DQFGKTKVHT +CPF+GH
Sbjct: 48 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHP 107
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDALIGRLRAA+EENGG+PE NPFGARAVRLYLREVR++QA+AR
Sbjct: 108 NPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKAR 167
Query: 200 GISYE 204
GISYE
Sbjct: 168 GISYE 172
>AT1G07090.1 | chr1:2174202-2174792 REVERSE LENGTH=197
Length = 196
Score = 221 bits (562), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 100/131 (76%), Positives = 113/131 (86%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDWNTF QYL+NH+PPL+LSRCSGAHV+EFLKY+DQFGKTKVH CP++GH
Sbjct: 31 RYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHVAACPYFGHQ 90
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
L+QAWGSLDALIGRLRAAYEENGG P+ NPF ARAVR+YLREVRE+QA+AR
Sbjct: 91 QPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLREVRESQAKAR 150
Query: 200 GISYEKKKRKK 210
GI YEKKKRK+
Sbjct: 151 GIPYEKKKRKR 161
>AT5G58500.1 | chr5:23645535-23646083 REVERSE LENGTH=183
Length = 182
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/132 (74%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDWNTF QYLRNH+PPL+LSRCSGAHVLEFLKY+DQFGKTKVH CPF+G
Sbjct: 19 RYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQFGKTKVHATACPFFGQP 78
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEE-NGGTPEMNPFGARAVRLYLREVRETQARA 198
L+QAWGSLDALIGRLRAA+EE GG PE NPF A+AVR+YL+EVR+TQA+A
Sbjct: 79 NPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAAKAVRIYLKEVRQTQAKA 138
Query: 199 RGISYEKKKRKK 210
RGI Y+KKKRK+
Sbjct: 139 RGIPYDKKKRKR 150
>AT5G28490.1 | chr5:10454541-10455113 REVERSE LENGTH=191
Length = 190
Score = 206 bits (525), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 97/130 (74%), Positives = 109/130 (83%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYE+QKRRDWNTF QYLRNHRPPLSL CSGAHVLEFL+Y+DQFGKTKVH C F+G
Sbjct: 25 RYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFFGLP 84
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDALIGRLRAAYEENGG PE NPFG+RAVRL+LREVR+ QA+AR
Sbjct: 85 NPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDFQAKAR 144
Query: 200 GISYEKKKRK 209
G+SYEKK+++
Sbjct: 145 GVSYEKKRKR 154
>AT3G04510.1 | chr3:1215812-1216417 REVERSE LENGTH=202
Length = 201
Score = 201 bits (511), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 109/130 (83%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYE+QKRRDWNTF QYLRNH PPLSL+ CSGAHVL+FL+Y+DQFGKTKVH C F+G
Sbjct: 33 RYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQFGKTKVHHQNCAFFGLP 92
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDALIGRLRAAYEENGG PE +PFG+R+VR++LREVR+ QA++R
Sbjct: 93 NPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSRSVRIFLREVRDFQAKSR 152
Query: 200 GISYEKKKRK 209
G+SYEKK+++
Sbjct: 153 GVSYEKKRKR 162
>AT2G42610.1 | chr2:17748005-17748538 FORWARD LENGTH=178
Length = 177
Score = 193 bits (490), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 99/124 (79%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDWNTFGQYL+N RPP+ +S CS HVL+FL+Y+DQFGKTKVH P C FYG
Sbjct: 25 RYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQP 84
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
LRQAWGSLDALIGRLRAAYEENGG PE NPF + A+R+YLREVRE QA+AR
Sbjct: 85 EPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAKAR 144
Query: 200 GISY 203
GI Y
Sbjct: 145 GIPY 148
>AT1G78815.1 | chr1:29632054-29632641 REVERSE LENGTH=196
Length = 195
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 78/124 (62%), Positives = 96/124 (77%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDWNTF QYLRN +PP+ +S+C H+L+FL+Y+DQFGKTKVH C F+G
Sbjct: 40 RYESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFGQV 99
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
L+QAWGSLDALIGRLRAA+EENGG PE NPF +R++LREVR++QA+AR
Sbjct: 100 EPAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIRVFLREVRDSQAKAR 159
Query: 200 GISY 203
G+ Y
Sbjct: 160 GVPY 163
>AT4G18610.1 | chr4:10250794-10251369 FORWARD LENGTH=192
Length = 191
Score = 164 bits (415), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQKRRDWNTF QYL++ PPL +S+ HVL FL+Y+DQFGKTKVH C F+G
Sbjct: 37 RYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQACVFFGQP 96
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEEN-GGTPEMNPFGARAVRLYLREVRETQARA 198
L+QAWGSLDALIGRLRAAYEE+ GG+P+ NPF ++R++LREVRE+QA+A
Sbjct: 97 DPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVRESQAKA 156
Query: 199 RGISY 203
RGI Y
Sbjct: 157 RGIPY 161
>AT1G16910.1 | chr1:5785373-5785867 FORWARD LENGTH=165
Length = 164
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 91/129 (70%)
Query: 80 RYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHX 139
RYESQK RDWNTF QYL PP+ + C H+L+FL+ DQFGKTKVH C F+G
Sbjct: 23 RYESQKSRDWNTFCQYLMTKMPPVHVWECESNHILDFLQSRDQFGKTKVHIQGCVFFGQK 82
Query: 140 XXXXXXXXXLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLREVRETQARAR 199
L+QAWGSLDALIGRLRAAYEENGG E NPF +R++LREVR +QA+AR
Sbjct: 83 EPPGECNCPLKQAWGSLDALIGRLRAAYEENGGLTEKNPFARGGIRIFLREVRGSQAKAR 142
Query: 200 GISYEKKKR 208
G+ Y+KKKR
Sbjct: 143 GVLYKKKKR 151
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,023,824
Number of extensions: 99728
Number of successful extensions: 217
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 215
Number of HSP's successfully gapped: 10
Length of query: 248
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 152
Effective length of database: 8,474,633
Effective search space: 1288144216
Effective search space used: 1288144216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 110 (47.0 bits)