BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0810300 Os02g0810300|AK059363
(292 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03905.1 | chr1:993478-995594 FORWARD LENGTH=291 439 e-123
AT5G44110.1 | chr5:17754222-17755672 REVERSE LENGTH=283 415 e-116
AT5G02270.2 | chr5:467269-469041 REVERSE LENGTH=355 286 9e-78
AT5G61730.1 | chr5:24803583-24807898 REVERSE LENGTH=941 57 1e-08
AT2G47800.1 | chr2:19574944-19580383 FORWARD LENGTH=1517 52 3e-07
AT3G47730.1 | chr3:17594342-17598828 REVERSE LENGTH=984 50 1e-06
AT3G62150.1 | chr3:23008755-23013579 REVERSE LENGTH=1297 50 2e-06
AT3G47740.1 | chr3:17600651-17604965 FORWARD LENGTH=933 50 2e-06
AT5G39040.1 | chr5:15625660-15629621 FORWARD LENGTH=645 49 2e-06
AT3G47780.1 | chr3:17624500-17628972 FORWARD LENGTH=936 49 2e-06
AT2G36910.1 | chr2:15502162-15507050 FORWARD LENGTH=1287 49 3e-06
AT1G67940.1 | chr1:25477805-25478667 FORWARD LENGTH=264 48 6e-06
>AT1G03905.1 | chr1:993478-995594 FORWARD LENGTH=291
Length = 290
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/280 (75%), Positives = 245/280 (87%), Gaps = 2/280 (0%)
Query: 13 GIEVSALQFDYDGQPPLFARFNLRIAPGSRCLLIGANGSGKTTLLKILAGKHMVGGRDVV 72
I VS +QF Y+ + P+F FNL + GSRCLL+GANGSGKTTLLKILAGKHMVGG++VV
Sbjct: 13 AIRVSGMQFAYEVEDPIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVV 72
Query: 73 RVLNGSAFHDTQLVCNGDLSYLGGSWSRAIGSAGDVPLQGDFSAEHMIFGVDGVDPVRRE 132
+VL+ SAFHDTQLVC+GDLSYLGGSWS+ +GSAG+VPLQGDFSAEHMIFGV+G DPVRRE
Sbjct: 73 QVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAGEVPLQGDFSAEHMIFGVEGTDPVRRE 132
Query: 133 KLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRMDLLDFFK 192
KL+DLLDI+LQWRMHKVSDGQ+RRVQICMGLLHP+KVLLLDE+TVDLDVV RMDLL+FFK
Sbjct: 133 KLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFK 192
Query: 193 EECEQREATIVYATHIFDGLESWATDIAYIQEGELRKSAKYSDVEELKSAKNLLSVVESW 252
EEC+QR ATIVYATHIFDGLE+WAT +AYIQ+GEL + +K +D+EELK++ NLLSVVESW
Sbjct: 193 EECDQRGATIVYATHIFDGLETWATHLAYIQDGELNRLSKMTDIEELKTSPNLLSVVESW 252
Query: 253 LRSETKLPKKEHPRPETQPRRSSPFDASPFRSSRHMAYYR 292
LRSE + + + P + SPFD SPFRSSRHMAYYR
Sbjct: 253 LRSE--IKLVKKKKKPVAPWKPSPFDNSPFRSSRHMAYYR 290
>AT5G44110.1 | chr5:17754222-17755672 REVERSE LENGTH=283
Length = 282
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/280 (72%), Positives = 236/280 (84%), Gaps = 9/280 (3%)
Query: 13 GIEVSALQFDYDGQPPLFARFNLRIAPGSRCLLIGANGSGKTTLLKILAGKHMVGGRDVV 72
I VS +QF YD Q P+F FNL + GSRCLL+GANGSGKTTLLKILAGKHMVGG++VV
Sbjct: 12 AIRVSGMQFSYDVQDPIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVV 71
Query: 73 RVLNGSAFHDTQLVCNGDLSYLGGSWSRAIGSAGDVPLQGDFSAEHMIFGVDGVDPVRRE 132
+VL+ SAFHDT+LVC+GDLSYLGGSWS+ GSAGD+PLQGDFSAEHMIFGV+G+DP RRE
Sbjct: 72 QVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAGDIPLQGDFSAEHMIFGVEGIDPFRRE 131
Query: 133 KLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRMDLLDFFK 192
KL+DLLDI+LQWRMHKVSDGQRRRVQICMGLLHP+KVLLLDE+TVDLDVV RMDLL+FFK
Sbjct: 132 KLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFK 191
Query: 193 EECEQREATIVYATHIFDGLESWATDIAYIQEGELRKSAKYSDVEELKSAKNLLSVVESW 252
EECEQR ATIVYATHIFDGLE+WA+ +AYI GEL+ SAK ++++LK++ NLLSVVE+W
Sbjct: 192 EECEQRGATIVYATHIFDGLETWASHLAYINGGELKLSAKLDEIKDLKTSPNLLSVVEAW 251
Query: 253 LRSETKLPKKEHPRPETQPRRSSPFDASPFRSSRHMAYYR 292
LRSETK + + P SPF SSR MAYYR
Sbjct: 252 LRSETK---------VEKKTKKKPVVTSPFMSSRQMAYYR 282
>AT5G02270.2 | chr5:467269-469041 REVERSE LENGTH=355
Length = 354
Score = 286 bits (732), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 155/288 (53%), Positives = 190/288 (65%), Gaps = 37/288 (12%)
Query: 1 MAGGEDEGWRRSGIEVSALQFDY---DGQPP-----LFARFNLRIAPGSRCLLIGANGSG 52
MA E+E R S +E+S L+F Y DG PP L F++ + RCLL+G+NG+G
Sbjct: 1 MAVTEEEKKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAG 60
Query: 53 KTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCNGDLSYLGGSWSRAIGSAG-DVPLQ 111
KTT+LKIL GKHMV +VRVL SAFHDT L +GDL YLGG W R + AG +VP+Q
Sbjct: 61 KTTILKILGGKHMVEPH-MVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQ 119
Query: 112 GDFSAEHMIFGVDGVDPVRREKLVDL--------------------------LDIDLQWR 145
D SAE MIFGV G+DP RR++L+ L LDID+ WR
Sbjct: 120 MDISAEKMIFGVAGIDPQRRDELIKLEHGLIFDLCHIPNLRALHCLEYYYSVLDIDISWR 179
Query: 146 MHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRMDLLDFFKEECEQREATIVYA 205
+HKVSDGQRRRVQICMGLL P+KVLLLDEITVDLDV+ R DLL F ++ECE+R ATI+YA
Sbjct: 180 LHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYA 239
Query: 206 THIFDGLESWATDIAYIQEGELRKSAKYSDVEELKSAKNLLSVVESWL 253
THIFDGLE W T I Y+ G+L+ + V+E S K+L+ VESWL
Sbjct: 240 THIFDGLEDWPTHIVYVANGKLQLALPMEKVKE-TSKKSLMRTVESWL 286
>AT5G61730.1 | chr5:24803583-24807898 REVERSE LENGTH=941
Length = 940
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 35 LRIAPGSRCLLIGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCNGDLSYL 94
+ IA L+G NG+GKTT + L G + V G D ++ N S +
Sbjct: 544 MNIAKDQLFCLLGPNGAGKTTTISCLTGINPVTG------------GDAKIYGNSIRSSV 591
Query: 95 GGSWSR-AIGSAGDVPLQGD-FSAE---HMIFGVDGVDPVRREKLVDLLDIDLQW----- 144
G S R IG + D S+E H+ + G+ P + + + L +D++
Sbjct: 592 GMSNIRKMIGVCPQFDILWDALSSEEHLHLFASIKGLPPSSIKSIAEKLLVDVKLTGSAK 651
Query: 145 -RMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRMDLLDFFKEECEQREATIV 203
R S G +RR+ + + L+ K++ LDE T +D +TR + D +E + R I+
Sbjct: 652 IRAGSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWDIIQESKKGR--AII 709
Query: 204 YATHIFDGLESWATDIAYIQEGELR 228
TH + + + I + +G LR
Sbjct: 710 LTTHSMEEADILSDRIGIMAKGRLR 734
>AT2G47800.1 | chr2:19574944-19580383 FORWARD LENGTH=1517
Length = 1516
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 126/297 (42%), Gaps = 69/297 (23%)
Query: 11 RSGIEVSALQFDYDGQ--PPLFARFNLRIAPGSRCLLIGANGSGKTTLL-KILAGKHMVG 67
+ +EV F +D + P + N ++ G ++G GSGK++LL +L H +
Sbjct: 638 NTAVEVRDGSFSWDDEDNEPALSDINFKVKKGELTAIVGTVGSGKSSLLASVLGEMHRIS 697
Query: 68 GRDVVRVLNGSAF-HDTQLVCNGDLSYLGGSWSRAIGSAGDVPLQGDFSAEHMIFGVDGV 126
G+ VRV + + T + NG + ++++FG+
Sbjct: 698 GQ--VRVCGSTGYVAQTSWIENGTVQ------------------------DNILFGL--- 728
Query: 127 DPVRREKLVDLLDI-----DLQW-----------RMHKVSDGQRRRVQICMGLLHPYKVL 170
P+ REK +L++ DLQ R +S GQ++R+Q+ + V
Sbjct: 729 -PMVREKYNKVLNVCSLEKDLQMMEFGDKTEIGERGINLSGGQKQRIQLARAVYQECDVY 787
Query: 171 LLDEITVDLDVVTRMDLLDFFKEECEQ---REATIVYATHIFDGLESWATDIAYIQEGEL 227
LLD++ +D T D+ ++C + + T++ TH D L + I +++G++
Sbjct: 788 LLDDVFSAVDAHTGSDIF----KKCVRGALKGKTVLLVTHQVDFLHN-VDCILVMRDGKI 842
Query: 228 RKSAKYSDV--------EELKSAKNLLSVVESWLRSETKLPKKEHPRPETQPRRSSP 276
+S KY ++ E + + + + +VE+ S PR T P SSP
Sbjct: 843 VESGKYDELVSSGLDFGELVAAHETSMELVEAGADSAA---VATSPRTPTSPHASSP 896
>AT3G47730.1 | chr3:17594342-17598828 REVERSE LENGTH=984
Length = 983
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 35 LRIAPGSRCLLIGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCNGDLSYL 94
+ IA L+G NG+GKTT + L G V G D + + G++ + + N
Sbjct: 552 MNIAKDQLFCLLGPNGAGKTTTINCLTGLFPVTGGDAL--IYGNSIRSSVGMSN------ 603
Query: 95 GGSWSRAIGSAGDVPLQGDFSA--EHM-IFG-VDGVDPVRREKLVD--LLDIDL----QW 144
+ IG + D + EH+ +F + G+ P +V+ L ++ L +
Sbjct: 604 ---IRKMIGVCPQFDILWDALSGEEHLKLFASIKGLPPSSINSMVEKSLAEVKLTEAGKI 660
Query: 145 RMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRMDLLDFFKEECEQREATIVY 204
R S G +RR+ + + L+ K++ LDE T +D +TR + D +E + R I+
Sbjct: 661 RAGSYSGGMKRRLSVAVSLIGDPKLVFLDEPTTGMDPITRRHVWDIIQETKKGR--AIIL 718
Query: 205 ATHIFDGLESWATDIAYIQEGELR 228
TH + + + I + +G LR
Sbjct: 719 TTHSMEEADILSDRIGIMAKGRLR 742
>AT3G62150.1 | chr3:23008755-23013579 REVERSE LENGTH=1297
Length = 1296
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 41/247 (16%)
Query: 11 RSGIEVSALQFDYDGQPP--LFARFNLRIAPGSRCLLIGANGSGKTTLLKILAGKHMVGG 68
R IE++ + F Y +P +F F+L I+ GS L+G +GSGK+T++ ++
Sbjct: 400 RGDIELNNVNFSYPARPEEQIFRGFSLSISSGSTVALVGQSGSGKSTVVSLI-------- 451
Query: 69 RDVVRVLNGSAFHDTQ---LVCNG-DLSYLGGSWSRA-IGSAGDVPLQGDFS-AEHMIFG 122
F+D Q + +G +L W R+ IG P+ S E++ +G
Sbjct: 452 ---------ERFYDPQSGEVRIDGINLKEFQLKWIRSKIGLVSQEPVLFTSSIKENIAYG 502
Query: 123 VDG--VDPVRR-----------EKLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKV 169
+ V+ +R+ +KL LD + ++S GQ++R+ + +L ++
Sbjct: 503 KENATVEEIRKATELANASKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKDPRI 562
Query: 170 LLLDEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLESWATDIAYIQEGELRK 229
LLLDE T LD + + + R T V H + + A IA I +G++ +
Sbjct: 563 LLLDEATSALDAESERIVQEALDRIMVNR--TTVVVAHRLSTVRN-ADMIAVIHQGKIVE 619
Query: 230 SAKYSDV 236
+S++
Sbjct: 620 KGSHSEL 626
>AT3G47740.1 | chr3:17600651-17604965 FORWARD LENGTH=933
Length = 932
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 37/223 (16%)
Query: 24 DGQPPLFARFNLRIA-PGSRCL-LIGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFH 81
DG PP A L +A P C ++G NG+GKT+ + ++ G +V+ +G+AF
Sbjct: 623 DGNPPKKAVRVLSLAVPSGECFGMLGPNGAGKTSFINMMTG--------LVKPTSGAAFV 674
Query: 82 DTQLVCNGDLSYLGGSWSRAIGSAGDVPLQGDF------SAEHMIF--------GVDGVD 127
+C R S G P Q D EH++F GVD
Sbjct: 675 QGLDICK--------DMDRVYTSMGVCP-QHDLLWETLTGREHLLFYGRLKNLKGVDLNQ 725
Query: 128 PVRRE-KLVDLLDIDLQWR-MHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRM 185
V + V+L + + K S G +RR+ + + L+ KV+ +DE + LD +R
Sbjct: 726 AVEESLRSVNLFHGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRK 785
Query: 186 DLLDFFKEECEQREATIVYATHIFDGLESWATDIAYIQEGELR 228
+L K +R I+ TH + E + +G L+
Sbjct: 786 NLWTVIKN--AKRHTAIILTTHSMEEAEFLCDRLGIFVDGRLQ 826
>AT5G39040.1 | chr5:15625660-15629621 FORWARD LENGTH=645
Length = 644
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 18/237 (7%)
Query: 14 IEVSALQFDYDGQPP--LFARFNLRIAPGSRCLLIGANGSGKTTLLKI-------LAGKH 64
+E++ + F Y +P + +LR+ PGS+ L+G +G GKTT+ + L GK
Sbjct: 396 VELNDVWFAYPSRPSHMILKGISLRLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGKI 455
Query: 65 MVGGRDVVRVLNGSAFHDTQLVCNGDLSY-LGGSWSRAIGSAGDVPLQGDFSAEHMIFGV 123
++ G ++ + + +V + + + A G G+ +A M
Sbjct: 456 LLNGVSLMEISHQYLHKQISIVSQEPILFNCSVEENIAYGFDGEASFTDIENAAKMANAH 515
Query: 124 DGVDPVRREKLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVT 183
+ + E D + + R ++S GQ++R+ I LL VLLLDE T LD +
Sbjct: 516 EFI-----EAFPDKYNTVVGERGLRLSGGQKQRIAIARALLTNPSVLLLDEATSALDAES 570
Query: 184 RMDLLDFFKEECEQREATIVYATHIFDGLESWATDIAYIQEGELRKSAKYSDVEELK 240
+ D R T++ H +++ A +A I +GE+ + + ++ L
Sbjct: 571 EYLVQDAMDSLMAGR--TVLVIAHRLSTVKT-ADCVAVISDGEVAEKGTHDELLSLN 624
>AT3G47780.1 | chr3:17624500-17628972 FORWARD LENGTH=936
Length = 935
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 37/223 (16%)
Query: 24 DGQPPLFARFNLRIA-PGSRCL-LIGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFH 81
DG PP A L +A P C ++G NG+GKT+ + ++ G +++ +G+A
Sbjct: 626 DGNPPKLAVRGLSLAVPSGECFGMLGPNGAGKTSFINMMTG--------LLKPTSGTALV 677
Query: 82 DTQLVCNGDLSYLGGSWSRAIGSAGDVPLQGDF------SAEHMIF--------GVDGVD 127
+CN R S G P Q D EH++F G D
Sbjct: 678 QGLDICN--------DMDRVYTSMGVCP-QHDLLWETLTGREHLLFYGRLKNLKGADLNQ 728
Query: 128 PVRRE-KLVDLLDIDLQWR-MHKVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRM 185
V K V+L + + K S G +RR+ + + L+ KV+ +DE + LD +R
Sbjct: 729 AVEESLKSVNLFHGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRK 788
Query: 186 DLLDFFKEECEQREATIVYATHIFDGLESWATDIAYIQEGELR 228
+L K ++ I+ TH + E + +G L+
Sbjct: 789 NLWTVIKR--AKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQ 829
>AT2G36910.1 | chr2:15502162-15507050 FORWARD LENGTH=1287
Length = 1286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 80/188 (42%), Gaps = 38/188 (20%)
Query: 14 IEVSALQFDYDGQP--PLFARFNLRIAPGSRCLLIGANGSGKTTLLKILAGKHMVGGRDV 71
+E+ + F Y +P + F L + G L+G++GSGK+T++ ++
Sbjct: 368 VELKNVDFSYPSRPDVKILNNFCLSVPAGKTIALVGSSGSGKSTVVSLI----------- 416
Query: 72 VRVLNGSAFHDT---QLVCNG-DLSYLGGSWSRA-IGSAGDVP-LQGDFSAEHMIFGVDG 125
F+D Q++ +G DL L W R IG P L E+++ G
Sbjct: 417 ------ERFYDPNSGQVLLDGQDLKTLKLRWLRQQIGLVSQEPALFATSIKENILLGRPD 470
Query: 126 VDPVRRE-------------KLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLL 172
D V E KL D D + R ++S GQ++R+ I +L +LLL
Sbjct: 471 ADQVEIEEAARVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLL 530
Query: 173 DEITVDLD 180
DE T LD
Sbjct: 531 DEATSALD 538
>AT1G67940.1 | chr1:25477805-25478667 FORWARD LENGTH=264
Length = 263
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 33 FNLRIAPGSRCLLIGANGSGKTTLLKILAGKHMVGGRDVVRVLNGSAFHDTQLVCNGDLS 92
+ I G +IG +GSGK+T L+ L + + F D + + N D+
Sbjct: 48 VTIDIPKGMIVGVIGPSGSGKSTFLRSL--------NRLWEPPESTVFLDGEDITNVDVI 99
Query: 93 YLGGSWSRAIGSAGDVPL--QGDFSAEHMIFGVDGVDPVRREKLVD--------LLDIDL 142
L R +G +P+ QG A+++ +G + +R EKL D L D+D
Sbjct: 100 AL----RRRVGMLFQLPVLFQGTV-ADNVRYGPN----LRGEKLSDEEVYKLLSLADLDA 150
Query: 143 QWRMH---KVSDGQRRRVQICMGLLHPYKVLLLDEITVDLDVVTRMDLLDFFKEECEQRE 199
+ ++S GQ +RV + L + +VLLLDE T LD ++ ++ D + +QR
Sbjct: 151 SFAKKTGAELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVIVKLKKQRG 210
Query: 200 ATIVYATHIFDGLESWATDIAYIQEGELRKSAKYSDV 236
T V +H ++ A + + +GE+ + K S++
Sbjct: 211 ITTVIVSHSIKQIQKVADIVCLVVDGEIVEVLKPSEL 247
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.138 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,872,157
Number of extensions: 292665
Number of successful extensions: 1296
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 1306
Number of HSP's successfully gapped: 15
Length of query: 292
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 194
Effective length of database: 8,419,801
Effective search space: 1633441394
Effective search space used: 1633441394
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)