BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0805200 Os02g0805200|AK071591
         (263 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G29570.1  | chr2:12650139-12651598 REVERSE LENGTH=265          492   e-139
AT1G07370.1  | chr1:2263204-2264382 FORWARD LENGTH=264            488   e-138

>AT2G29570.1 | chr2:12650139-12651598 REVERSE LENGTH=265
          Length = 264

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 234/262 (89%), Positives = 250/262 (95%)

Query: 1   MLELRLVQGSLLKKVLEAIRELVTDANFDCSGTGFSLQAMDSSHVALVALLLRSEGFEHY 60
           MLELRLVQGSLLKKVLEA+++LV DANFDCS TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNLSMGMNLNNMAKMLRCAGNDDIITIKADDGSDTVTFMFESPNQDKIADFEMKLMD 120
           RCDRNLSMGMNL NM+KML+CAGNDDIITIKADDGSDTVTFMFESP QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDSEYQAIVRMPSSEFSRICKDLSSIGDTVIISVTKEGVKFSTAGDIGTANI 180
           IDSEHLGIPD+EY +IVRMPS EFSRICKDLSSIGDTV+ISVTKEGVKFSTAGDIGTANI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180

Query: 181 VCRQNKTVDKPEDATIIEMQEPVSLTFALRYMNSFTKASPLSEQVTISLSSELPVVVEYK 240
           V RQN TVDKPEDA +IEM EPVSL+FALRYMNSFTKA+PLSE VTISLSSELPVVVEYK
Sbjct: 181 VLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYK 240

Query: 241 IAEMGYIRFYLAPKIEEDEEMK 262
           +AEMGYIR+YLAPKIEE+E+ K
Sbjct: 241 VAEMGYIRYYLAPKIEEEEDTK 262



>AT1G07370.1 | chr1:2263204-2264382 FORWARD LENGTH=264
          Length = 263

 Score =  488 bits (1255), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 231/260 (88%), Positives = 250/260 (96%)

Query: 1   MLELRLVQGSLLKKVLEAIRELVTDANFDCSGTGFSLQAMDSSHVALVALLLRSEGFEHY 60
           MLELRLVQGSLLKKVLE+I++LV DANFDCS TGFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNLSMGMNLNNMAKMLRCAGNDDIITIKADDGSDTVTFMFESPNQDKIADFEMKLMD 120
           RCDRNLSMGMNL NM+KML+CAGNDDIITIKADDG DTVTFMFESP QDKIADFEMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSEHLGIPDSEYQAIVRMPSSEFSRICKDLSSIGDTVIISVTKEGVKFSTAGDIGTANI 180
           IDSEHLGIPD+EY +IVRMPS+EFSRICKDLSSIGDTV+ISVTKEGVKFSTAGDIGTANI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180

Query: 181 VCRQNKTVDKPEDATIIEMQEPVSLTFALRYMNSFTKASPLSEQVTISLSSELPVVVEYK 240
           V RQN TVDKPEDA +IEM+EPVSL+FALRYMNSFTKA+PLS+ VTISLSSELPVVVEYK
Sbjct: 181 VLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYK 240

Query: 241 IAEMGYIRFYLAPKIEEDEE 260
           +AEMGYIR+YLAPKIEE+E+
Sbjct: 241 VAEMGYIRYYLAPKIEEEED 260



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.133    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,397,016
Number of extensions: 215627
Number of successful extensions: 545
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 545
Number of HSP's successfully gapped: 2
Length of query: 263
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 166
Effective length of database: 8,447,217
Effective search space: 1402238022
Effective search space used: 1402238022
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)