BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0798700 Os02g0798700|AK101070
         (639 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G32050.1  | chr4:15496620-15500717 FORWARD LENGTH=619          540   e-153

>AT4G32050.1 | chr4:15496620-15500717 FORWARD LENGTH=619
          Length = 618

 Score =  540 bits (1390), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 285/612 (46%), Positives = 413/612 (67%), Gaps = 16/612 (2%)

Query: 21  FEECLRLLRGERDEQKLAGLLVAANLCRAGDAASVVEVYRAVGPRFLRRLLNTGLGKVEG 80
            ++CL+LL+GERDEQ+LAGLL+    C+  D  S+ +VY AVG  FL RL  TG G  +G
Sbjct: 13  LDDCLKLLKGERDEQRLAGLLLVTKFCKNDDIVSLNKVYEAVGTHFLDRLFRTGSGSGDG 72

Query: 81  GKEEDREAYLRLSVTVLSGLARFPEVAADEGVVSTVPLIAEIVSKSSDLAITEECFELLS 140
              ++R+ YL++S+TVL+   R PE+A+ E +VS +PLI E++SK     + E+C+ELL 
Sbjct: 73  --VDNRDVYLQISITVLAAFCRVPEIASSEEMVSRIPLILEVMSKGITTNMLEDCYELLY 130

Query: 141 LIAIASDGGAHTFCEPGVMDMLFLQISNFPDGSRCLELAIHLMQLLVHKIRIDNMTVEKL 200
           L++ A + G  T    G + ++  Q+S  PDGS  +E+AI ++QLLV K+   +MT+E+ 
Sbjct: 131 LVSTACEAGLMTLINSGGLRVIAPQMSELPDGSHAMEVAIKILQLLVSKLDCGSMTIERF 190

Query: 201 QGMTSMVTSLARLFAVLHTTVKFEALHMLTALLSQKESPL-HDALRSVPSMIWKCQIRVG 259
             ++ ++ ++AR FAVLH  +KFEALH+L+A+ S + S L H+ LRS+P   W   +R G
Sbjct: 191 LELSLVIAAVARQFAVLHNALKFEALHLLSAVFSSEYSELLHEPLRSMPDNNWADYMRTG 250

Query: 260 ITAVLQNRVVSSEKLQALLLAECMMSILGENWLSEEYKVPDDQNMMPVDKFVLLVLESAR 319
           + A+LQNRV  SEKL AL+LAE MMSILGE WL    K+P+    +P D+ +LLVLES+ 
Sbjct: 251 VVAILQNRVAPSEKLHALILAENMMSILGEKWLLGGVKLPNVD--IPADRCLLLVLESSH 308

Query: 320 IEVSVLLNELAYLKYESSKNSQRDDAISQKERNLAILFSLIERIIKMISNASSGEGAVCQ 379
           +E+SVLLN+LAY KYE+ K++   + I  K+R L I+FSL+E+IIK IS+A   EG +  
Sbjct: 309 VEISVLLNDLAYKKYEAPKDNSTAEDILLKQRYLPIVFSLVEKIIKYISSAGENEGTLSD 368

Query: 380 TIRESTIMKAITGLNETVGLVLDFLQDAKDHGQRKGDDLLAAVRIVGSYLAEAPYACKEK 439
              E+   K I  LNETVG V ++L+DAK+HG +KG DLLA+VR++GSYLAE P ACKE+
Sbjct: 369 ---EAVFQKVIKILNETVGAVFEYLRDAKEHGIKKGTDLLASVRVIGSYLAETPVACKEQ 425

Query: 440 IRHLLEFIFSVEGQDESSSFHSICFMLPMLSQITMEADGCRILASFGGYKMVIDCLIKMI 499
           ++ LL+++ SV+G+DESS F S CF+LPML QITM A+GC++LA   G   V++CLIK+I
Sbjct: 426 VQDLLDYMLSVKGEDESSPFLSTCFLLPMLCQITMNAEGCKLLAYSRGDVAVVECLIKLI 485

Query: 500 EQNGMMIDTG-NMFLACDTIINFLSNMKNAHIQMGSCFVGLLKALVSWTGTADDSSVIIT 558
           E+ G  +D   ++FLACDTI+N L   +       S F  LLKAL  W   ++D SV++ 
Sbjct: 486 ERCGESVDEDRSIFLACDTIMNILLKREEISPPEISTFASLLKALAYWADGSNDHSVVMM 545

Query: 559 ASCLCTLVLDLTTEEFL-LSSSDFDSKTLEKLSKLIARSLHQGIPDDDIEQSNQKQIILS 617
           A+ +C+L+ D T+E+ L LS S  DS     L++L+ RSL      D  + ++  +II +
Sbjct: 546 AASICSLIFDFTSEDALQLSRSSLDS-----LARLVTRSLSSS-GQDMSDTADLLEIIRA 599

Query: 618 GYRRWSDRYPRV 629
           GY RW +R+P +
Sbjct: 600 GYSRWINRFPTI 611



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.135    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,114,193
Number of extensions: 468445
Number of successful extensions: 1180
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1174
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 534
Effective length of database: 8,227,889
Effective search space: 4393692726
Effective search space used: 4393692726
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)