BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0796600 Os02g0796600|AK067973
(264 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31020.2 | chr4:15108832-15110079 REVERSE LENGTH=295 424 e-119
AT2G24320.1 | chr2:10345659-10346829 REVERSE LENGTH=287 405 e-114
AT5G14390.1 | chr5:4637551-4639575 REVERSE LENGTH=370 340 3e-94
AT3G30380.1 | chr3:11974424-11976571 FORWARD LENGTH=400 338 1e-93
AT3G01690.1 | chr3:256753-258379 FORWARD LENGTH=362 334 3e-92
AT4G24760.1 | chr4:12761482-12763564 REVERSE LENGTH=366 332 2e-91
AT1G32190.1 | chr1:11593059-11595731 REVERSE LENGTH=423 324 3e-89
AT5G38220.1 | chr5:15269012-15271140 FORWARD LENGTH=337 322 1e-88
AT1G66900.1 | chr1:24959552-24961255 FORWARD LENGTH=273 312 1e-85
AT1G13610.1 | chr1:4664008-4665975 REVERSE LENGTH=359 291 3e-79
AT5G20520.1 | chr5:6943536-6946315 REVERSE LENGTH=309 62 3e-10
>AT4G31020.2 | chr4:15108832-15110079 REVERSE LENGTH=295
Length = 294
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/264 (76%), Positives = 226/264 (85%), Gaps = 4/264 (1%)
Query: 1 MTGVSADAGVEVHALPTKGGTRVVAAFWRHPSARLTLLYSHGNAADLGQMLGLFLELRAH 60
GVSAD VEVH L TK G +VVA FWRHP AR TLLYSHGNAADLGQM+ LF+ELRAH
Sbjct: 35 FAGVSADKNVEVHQLTTKSGNKVVATFWRHPFARFTLLYSHGNAADLGQMVELFIELRAH 94
Query: 61 LRVNIMSYDYSGYGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTL 120
LRVNIMSYDYSGYGASTGKPSE+NTY DIEAVY CL YGI+ E++ILYGQSVGSGPTL
Sbjct: 95 LRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYSCLRSDYGIKQEEIILYGQSVGSGPTL 154
Query: 121 HLASRLEKLRGVVLHSAILSGIRVLYPVKVTLWFDIFKNIDKIKQVDCPVLVIHGTADDI 180
H+ASRL++LRGVVLHSAILSGIRVLYPVK+TLWFDIFKNIDKI+ V+ VLVIHGT D+I
Sbjct: 155 HMASRLKRLRGVVLHSAILSGIRVLYPVKMTLWFDIFKNIDKIRHVNSQVLVIHGTNDEI 214
Query: 181 VDFSHGKRLWELAKEKYEPLWVKGGGHCNLETYPEYIRHLRKFINAMEKLSKDKTAKAPQ 240
VD SHGKRLWELAKEKY+PLWVKGGGHCNLETYPEYI+HL+KF+NAMEKLS P
Sbjct: 215 VDLSHGKRLWELAKEKYDPLWVKGGGHCNLETYPEYIKHLKKFVNAMEKLS----LTNPP 270
Query: 241 LAPSSSNNNMTEVKHNKCLRFGKR 264
++ ++TE KHN+CL+FGKR
Sbjct: 271 PKQLTNEPSITETKHNRCLKFGKR 294
>AT2G24320.1 | chr2:10345659-10346829 REVERSE LENGTH=287
Length = 286
Score = 405 bits (1042), Expect = e-114, Method: Compositional matrix adjust.
Identities = 186/264 (70%), Positives = 222/264 (84%), Gaps = 4/264 (1%)
Query: 1 MTGVSADAGVEVHALPTKGGTRVVAAFWRHPSARLTLLYSHGNAADLGQMLGLFLELRAH 60
TG++ + ++VH L TK G +V+A FW+HP +R TLLYSHGNAADLGQM+ LF+ELRAH
Sbjct: 27 FTGITPEKSMDVHQLTTKSGNKVIATFWKHPFSRFTLLYSHGNAADLGQMVDLFIELRAH 86
Query: 61 LRVNIMSYDYSGYGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTL 120
LRVNIMSYDYSGYGASTGKP+E NTY DIEAVY+CL YGI E++ILYGQSVGSGPTL
Sbjct: 87 LRVNIMSYDYSGYGASTGKPTELNTYYDIEAVYNCLRTEYGIMQEEMILYGQSVGSGPTL 146
Query: 121 HLASRLEKLRGVVLHSAILSGIRVLYPVKVTLWFDIFKNIDKIKQVDCPVLVIHGTADDI 180
HLASR+++LRG+VLHSAILSG+RVLYPVK+T WFD++KNIDKI+ V CPVLVIHGT DDI
Sbjct: 147 HLASRVKRLRGIVLHSAILSGLRVLYPVKMTFWFDMYKNIDKIRHVTCPVLVIHGTKDDI 206
Query: 181 VDFSHGKRLWELAKEKYEPLWVKGGGHCNLETYPEYIRHLRKFINAMEKLSKDKTAKAPQ 240
V+ SHGKRLWELAK+KY+PLWVKGGGHCNLETYPEYI+H+RKF+NAMEKL+ + Q
Sbjct: 207 VNMSHGKRLWELAKDKYDPLWVKGGGHCNLETYPEYIKHMRKFMNAMEKLALNNPPNKQQ 266
Query: 241 LAPSSSNNNMTEVKHNKCLRFGKR 264
+ ++ E K N+CLRF KR
Sbjct: 267 ----NDEPSIKETKQNRCLRFSKR 286
>AT5G14390.1 | chr5:4637551-4639575 REVERSE LENGTH=370
Length = 369
Score = 340 bits (873), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 192/242 (79%), Gaps = 1/242 (0%)
Query: 9 GVEVHALPTKGGTRVVAAFWRHPSARLTLLYSHGNAADLGQMLGLFLELRAHLRVNIMSY 68
VE+ LPT+ GT +VA + RHP A TLLYSHGNAADLGQM LF+EL HL+VN+M Y
Sbjct: 43 NVEILKLPTRRGTEIVAMYVRHPMATSTLLYSHGNAADLGQMYELFIELSIHLKVNLMGY 102
Query: 69 DYSGYGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTLHLASRLEK 128
DYSGYG STGKPSE++TY DIEA Y CL + YG + ED+ILYGQSVGSGPTL LA+RL +
Sbjct: 103 DYSGYGQSTGKPSEHHTYADIEAAYKCLEETYGAKQEDIILYGQSVGSGPTLDLAARLPQ 162
Query: 129 LRGVVLHSAILSGIRVLYPVKVTLWFDIFKNIDKIKQVDCPVLVIHGTADDIVDFSHGKR 188
LR VLHS ILSG+RV+YPVK T WFDIFKNIDKI V+CPVLVIHGT D++VD SHGK+
Sbjct: 163 LRAAVLHSPILSGLRVMYPVKKTYWFDIFKNIDKIPLVNCPVLVIHGTCDEVVDCSHGKQ 222
Query: 189 LWELAKEKYEPLWVKGGGHCNLETYPEYIRHLRKFINAMEKLSKDKTAKAPQLAPSSSNN 248
LWEL+KEKYEPLW++GG HC+LE YPEYI+HL+KFI +E+ + + A QL SS+
Sbjct: 223 LWELSKEKYEPLWLEGGNHCDLEHYPEYIKHLKKFITTVERDLSSRASTA-QLEKQSSDL 281
Query: 249 NM 250
M
Sbjct: 282 EM 283
>AT3G30380.1 | chr3:11974424-11976571 FORWARD LENGTH=400
Length = 399
Score = 338 bits (868), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 195/244 (79%)
Query: 9 GVEVHALPTKGGTRVVAAFWRHPSARLTLLYSHGNAADLGQMLGLFLELRAHLRVNIMSY 68
VEV L TK G +VVAA+ ++P+A LTLLYSHGNAADLGQM LF EL HLRVN++ Y
Sbjct: 42 NVEVLKLKTKRGNQVVAAYIKNPTASLTLLYSHGNAADLGQMFELFSELSLHLRVNLIGY 101
Query: 69 DYSGYGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTLHLASRLEK 128
DYSGYG S+GKPSE NTY DIEAVY CL + YG++ +D+ILYGQSVGSGPTL LASRL
Sbjct: 102 DYSGYGRSSGKPSEQNTYSDIEAVYRCLEEKYGVKEQDVILYGQSVGSGPTLELASRLPN 161
Query: 129 LRGVVLHSAILSGIRVLYPVKVTLWFDIFKNIDKIKQVDCPVLVIHGTADDIVDFSHGKR 188
LR VVLHSAI SG+RV+YPVK T WFDI+KN++KI V CPVLVIHGT+DD+V++SHGK+
Sbjct: 162 LRAVVLHSAIASGLRVMYPVKRTYWFDIYKNVEKISFVKCPVLVIHGTSDDVVNWSHGKQ 221
Query: 189 LWELAKEKYEPLWVKGGGHCNLETYPEYIRHLRKFINAMEKLSKDKTAKAPQLAPSSSNN 248
L+EL KEKYEPLW+KGG HC+LE YP+YI+HLRKF++A+EK + P + S+
Sbjct: 222 LFELCKEKYEPLWIKGGNHCDLELYPQYIKHLRKFVSAIEKSPILRNGPVPLTEKARSST 281
Query: 249 NMTE 252
++ E
Sbjct: 282 DIRE 285
>AT3G01690.1 | chr3:256753-258379 FORWARD LENGTH=362
Length = 361
Score = 334 bits (856), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 160/253 (63%), Positives = 193/253 (76%), Gaps = 5/253 (1%)
Query: 9 GVEVHALPTKGGTRVVAAFWRHPSARLTLLYSHGNAADLGQMLGLFLELRAHLRVNIMSY 68
VE+ L T+ GT +V + RHP A TLLYSHGNAADLGQM LF+EL HL+VN+M Y
Sbjct: 43 NVEIVKLRTRRGTEIVGMYVRHPMATSTLLYSHGNAADLGQMYELFIELSIHLKVNLMGY 102
Query: 69 DYSGYGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTLHLASRLEK 128
DYSGYG STGKPSE+NTY DIEAVY CL + +G + E +ILYGQSVGSGPTL LASRL +
Sbjct: 103 DYSGYGQSTGKPSEHNTYADIEAVYKCLEETFGSKQEGVILYGQSVGSGPTLDLASRLPQ 162
Query: 129 LRGVVLHSAILSGIRVLYPVKVTLWFDIFKNIDKIKQVDCPVLVIHGTADDIVDFSHGKR 188
LR VVLHS ILSG+RV+Y VK T WFDI+KNIDKI VDCPVL+IHGT+D++VD SHGK+
Sbjct: 163 LRAVVLHSPILSGLRVMYSVKKTYWFDIYKNIDKIPYVDCPVLIIHGTSDEVVDCSHGKQ 222
Query: 189 LWELAKEKYEPLWVKGGGHCNLETYPEYIRHLRKFINAMEKL-----SKDKTAKAPQLAP 243
LWEL K+KYEPLWVKGG HC+LE YPEYIRHL+KFI +E+L S D++ + P
Sbjct: 223 LWELCKDKYEPLWVKGGNHCDLEHYPEYIRHLKKFIATVERLPCPRMSSDQSERVRDAPP 282
Query: 244 SSSNNNMTEVKHN 256
S + + + +
Sbjct: 283 RRSMDRRVKPRQS 295
>AT4G24760.1 | chr4:12761482-12763564 REVERSE LENGTH=366
Length = 365
Score = 332 bits (850), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 152/236 (64%), Positives = 188/236 (79%)
Query: 1 MTGVSADAGVEVHALPTKGGTRVVAAFWRHPSARLTLLYSHGNAADLGQMLGLFLELRAH 60
M+ V++ LPT+ GT +VA + R+P A TLLYSHGNAAD+GQM LF+EL H
Sbjct: 35 MSPFPHRENVDILRLPTRRGTEIVAMYIRYPMAVTTLLYSHGNAADIGQMYELFIELSIH 94
Query: 61 LRVNIMSYDYSGYGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTL 120
LRVN+M YDYSGYG S+GKP+E NTY DIEA Y CL + YG + E++ILYGQSVGSGPT+
Sbjct: 95 LRVNLMGYDYSGYGQSSGKPTEQNTYADIEAAYKCLEENYGAKQENIILYGQSVGSGPTV 154
Query: 121 HLASRLEKLRGVVLHSAILSGIRVLYPVKVTLWFDIFKNIDKIKQVDCPVLVIHGTADDI 180
LA+RL +LR +LHS ILSG+RV+YPVK T WFDI+KNIDKI V CPVLVIHGTADD+
Sbjct: 155 DLAARLPRLRASILHSPILSGLRVMYPVKRTYWFDIYKNIDKITLVRCPVLVIHGTADDV 214
Query: 181 VDFSHGKRLWELAKEKYEPLWVKGGGHCNLETYPEYIRHLRKFINAMEKLSKDKTA 236
VDFSHGK+LWEL +EKYEPLW+KGG HC+LE +PEYI HL+KF++A+EK + + +
Sbjct: 215 VDFSHGKQLWELCQEKYEPLWLKGGNHCDLELFPEYIGHLKKFVSAVEKSASKRNS 270
>AT1G32190.1 | chr1:11593059-11595731 REVERSE LENGTH=423
Length = 422
Score = 324 bits (831), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 150/224 (66%), Positives = 183/224 (81%)
Query: 5 SADAGVEVHALPTKGGTRVVAAFWRHPSARLTLLYSHGNAADLGQMLGLFLELRAHLRVN 64
+ D ++V + T+ G +V A + R+P+ARLTLLYSHGNAADLGQ+ LF++L+ +LRVN
Sbjct: 48 AGDPSLDVKVVKTRRGNKVTAFYLRNPNARLTLLYSHGNAADLGQLFDLFVQLKVNLRVN 107
Query: 65 IMSYDYSGYGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTLHLAS 124
+M YDYSGYGASTGKPSEY+TY DIEA Y+CL YG+ EDLILYGQSVGSGPTLHLAS
Sbjct: 108 LMGYDYSGYGASTGKPSEYDTYADIEAAYECLQTDYGVGQEDLILYGQSVGSGPTLHLAS 167
Query: 125 RLEKLRGVVLHSAILSGIRVLYPVKVTLWFDIFKNIDKIKQVDCPVLVIHGTADDIVDFS 184
+L +LRGVVLHS ILSG+RVL VK DI+ N++KIK+V CPVLVIHGT DD+V++
Sbjct: 168 KLPRLRGVVLHSGILSGLRVLCHVKFKFCCDIYSNVNKIKKVKCPVLVIHGTEDDVVNWL 227
Query: 185 HGKRLWELAKEKYEPLWVKGGGHCNLETYPEYIRHLRKFINAME 228
HG RLW++AKE YEPLW+KGGGHCNLE YP+YIRHL +FI ME
Sbjct: 228 HGNRLWKMAKEPYEPLWIKGGGHCNLEIYPDYIRHLYRFIQDME 271
>AT5G38220.1 | chr5:15269012-15271140 FORWARD LENGTH=337
Length = 336
Score = 322 bits (825), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 153/229 (66%), Positives = 181/229 (79%)
Query: 1 MTGVSADAGVEVHALPTKGGTRVVAAFWRHPSARLTLLYSHGNAADLGQMLGLFLELRAH 60
+T V V+V L T+ G +VA + +HP A TLLYSHGNAADLGQM LF+EL
Sbjct: 33 ITEVPRRDDVDVLKLKTRRGNEIVAIYIKHPKANGTLLYSHGNAADLGQMFELFIELSNR 92
Query: 61 LRVNIMSYDYSGYGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTL 120
LR+N+M YDYSGYG STGK SE NTY DI+A Y CL + YG++ + LILYGQSVGSGPT+
Sbjct: 93 LRLNLMGYDYSGYGQSTGKASECNTYADIDAAYTCLKEHYGVKDDQLILYGQSVGSGPTI 152
Query: 121 HLASRLEKLRGVVLHSAILSGIRVLYPVKVTLWFDIFKNIDKIKQVDCPVLVIHGTADDI 180
LASR LRGVVLHS ILSG+RVLYPVK T WFDI+KNIDKI V CPVLVIHGTAD++
Sbjct: 153 DLASRTPNLRGVVLHSPILSGMRVLYPVKRTYWFDIYKNIDKIGAVTCPVLVIHGTADEV 212
Query: 181 VDFSHGKRLWELAKEKYEPLWVKGGGHCNLETYPEYIRHLRKFINAMEK 229
VD SHGK+LWEL+KEKYEPLWV GGGHCNLE YPE+I+HL+K++ ++ K
Sbjct: 213 VDCSHGKQLWELSKEKYEPLWVSGGGHCNLELYPEFIKHLKKYVISISK 261
>AT1G66900.1 | chr1:24959552-24961255 FORWARD LENGTH=273
Length = 272
Score = 312 bits (800), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 149/230 (64%), Positives = 179/230 (77%), Gaps = 3/230 (1%)
Query: 10 VEVHALPTKGGTRVVAAFWRHPSARLTLLYSHGNAADLGQMLGLFLELRAHLRVNIMSYD 69
V++ L T+ G +VA + +H A TLLYSHGNAADLGQM LF+EL LRVN+M YD
Sbjct: 45 VDILKLRTRCGNEIVAVYVKHSKANGTLLYSHGNAADLGQMFELFVELSNRLRVNLMGYD 104
Query: 70 YSGYGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTLHLASRLEKL 129
YSGYG STG+ SE NTY DIEA Y CL + YG++ + LI+YGQSVGSGPT+ LASR L
Sbjct: 105 YSGYGQSTGQASECNTYADIEASYKCLKEKYGVKDDQLIVYGQSVGSGPTVDLASRTPNL 164
Query: 130 RGVVLHSAILSGIRVLYPVKVTLWFDIFKNIDKIKQVDCPVLVIHGTADDIVDFSHGKRL 189
RGVVL ILSG+RVLYPVK T WFDI+KNIDKI V CPVLVIHGTAD++VD+SHGKRL
Sbjct: 165 RGVVLQCPILSGMRVLYPVKCTYWFDIYKNIDKIGSVTCPVLVIHGTADEVVDWSHGKRL 224
Query: 190 WELAKEKYEPLWVKGGGHCNLETYPEYIRHLRKFINAMEKLSKDKTAKAP 239
WEL+KEKYEPLW+ GGGHC+LE YP++IRHL+KF+ + L + +AP
Sbjct: 225 WELSKEKYEPLWISGGGHCDLELYPDFIRHLKKFVVS---LGNKQAEQAP 271
>AT1G13610.1 | chr1:4664008-4665975 REVERSE LENGTH=359
Length = 358
Score = 291 bits (744), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/258 (56%), Positives = 183/258 (70%), Gaps = 7/258 (2%)
Query: 7 DAGVEVHALPTKGGTRVVAAFWRHPSARLTLLYSHGNAADLGQMLGLFLELRAHLRVNIM 66
D +EV + TK G +VA + ++P+A+LT+L+SHGNA+DL Q+ + EL L VN+M
Sbjct: 45 DENIEVVKIRTKRGNEIVAMYVKNPTAKLTVLFSHGNASDLAQIFYILAEL-IQLNVNLM 103
Query: 67 SYDYSGYGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTLHLASRL 126
YDYSGYG S+GKPSE +TY DIEA Y+ L + YG + E +ILYGQSVGSGP+L LASRL
Sbjct: 104 GYDYSGYGQSSGKPSEQDTYADIEAAYNWLRQTYGTKDERIILYGQSVGSGPSLELASRL 163
Query: 127 EKLRGVVLHSAILSGIRVLYPVKVTLWFDIFKNIDKIKQVDCPVLVIHGTADDIVDFSHG 186
+LR +VLHS LSG+RV+YPVK + FDI+KNIDKI V+CPVLVIHGT DD+V+ SHG
Sbjct: 164 PRLRALVLHSPFLSGLRVMYPVKHSFPFDIYKNIDKIHLVECPVLVIHGTDDDVVNISHG 223
Query: 187 KRLWELAKEKYEPLWVKGGGHCNLETYPEYIRHLRKFINAMEKLSKDKTAKAPQLAPSSS 246
K LW L KEKYEPLW+KG GH ++E PEY+ HLRKFI+A+EKL P+ S
Sbjct: 224 KHLWGLCKEKYEPLWLKGRGHSDIEMSPEYLPHLRKFISAIEKLP------VPKFRRQSL 277
Query: 247 NNNMTEVKHNKCLRFGKR 264
N+ K K G R
Sbjct: 278 ANDHKNDKSTKSSWIGSR 295
>AT5G20520.1 | chr5:6943536-6946315 REVERSE LENGTH=309
Length = 308
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 15 LPTKGGTRVVAAFWR-HPSAR-LTLLYSHGNAADLGQMLGLFLELRAHLRVNIMSYDYSG 72
L + G R+ A F + P R T+L+ NA ++ L + + L+ N+ Y G
Sbjct: 59 LQSSDGVRLHAWFIKMFPECRGPTILFFQENAGNIAHRLEMVRIMIQKLKCNVFMLSYRG 118
Query: 73 YGASTGKPSEYNTYCDIEAVYDCLTKVYGIEPEDLILYGQSVGSGPTLHLA-SRLEKLRG 131
YGAS G PS+ D +A D L+ I+ ++++G+S+G L + +K+
Sbjct: 119 YGASEGYPSQQGIIKDAQAALDHLSGRTDIDTSRIVVFGRSLGGAVGAVLTKNNPDKVSA 178
Query: 132 VVLH---SAILSGIRVLYPVKVTLWF-----------------DIFKNIDKIKQVDCPVL 171
++L ++IL VL P WF +K ID I ++ PVL
Sbjct: 179 LILENTFTSILDMAGVLLP--FLKWFIGGSGTKSLKLLNFVVRSPWKTIDAIAEIKQPVL 236
Query: 172 VIHGTADDIVDFSHGKRLWELAKEK 196
+ G D++V H K L+ A +
Sbjct: 237 FLSGLQDEMVPPFHMKMLYAKAAAR 261
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,084,591
Number of extensions: 256610
Number of successful extensions: 728
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 725
Number of HSP's successfully gapped: 11
Length of query: 264
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 167
Effective length of database: 8,447,217
Effective search space: 1410685239
Effective search space used: 1410685239
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)