BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0796300 Os02g0796300|AK119386
(295 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G32070.1 | chr2:13640829-13641656 REVERSE LENGTH=276 412 e-116
AT1G80780.3 | chr1:30358517-30359583 FORWARD LENGTH=287 398 e-111
AT5G10960.1 | chr5:3464581-3465414 FORWARD LENGTH=278 362 e-100
AT1G15920.2 | chr1:5469962-5470822 FORWARD LENGTH=287 330 5e-91
AT3G44260.1 | chr3:15952213-15953055 REVERSE LENGTH=281 279 1e-75
AT5G22250.1 | chr5:7365605-7366441 REVERSE LENGTH=279 271 3e-73
AT1G06450.1 | chr1:1965924-1967006 FORWARD LENGTH=361 168 4e-42
AT1G61470.1 | chr1:22678185-22679021 FORWARD LENGTH=279 132 2e-31
AT1G27820.1 | chr1:9691628-9692560 FORWARD LENGTH=311 122 3e-28
AT3G44240.1 | chr3:15940184-15940903 FORWARD LENGTH=240 120 9e-28
AT1G27890.1 | chr1:9714136-9715044 REVERSE LENGTH=303 116 1e-26
>AT2G32070.1 | chr2:13640829-13641656 REVERSE LENGTH=276
Length = 275
Score = 412 bits (1060), Expect = e-116, Method: Compositional matrix adjust.
Identities = 187/263 (71%), Positives = 224/263 (85%)
Query: 33 REVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDML 92
REVW DNLE E ALIR+VVD+FPFVAMDTEFPGIVCRPVG F++ +Y+Y TLK NV++L
Sbjct: 13 REVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEYHYETLKTNVNIL 72
Query: 93 HLIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRRSGIDFRRN 152
+IQLGLTFS +G LP G + C+WQFNFREFD DI+A+DSIELLR+SGIDF +N
Sbjct: 73 KMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKN 132
Query: 153 SERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSSLPDTQAGFFKLMK 212
+E G+D++RFAELLMSSG+VLN++V+WVTFH+GYDFGYLLK+LTC +LP+TQ GFF+++
Sbjct: 133 NEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMIS 192
Query: 213 IYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGESHQAGSDSLVTSCAFWKLKDSFF 272
+YFP VYDIKHLMKFCNSLHGGLNKLAELLDVERVG HQAGSDSL+TSC F KL+++FF
Sbjct: 193 VYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTSCTFRKLQENFF 252
Query: 273 AGSTEKYAGVLYGLNAENVVSAH 295
GS EKY+GVLYGL EN H
Sbjct: 253 IGSMEKYSGVLYGLGVENGQIVH 275
>AT1G80780.3 | chr1:30358517-30359583 FORWARD LENGTH=287
Length = 286
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 185/258 (71%), Positives = 219/258 (84%), Gaps = 1/258 (0%)
Query: 33 REVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDML 92
REVW DNL+EE LIRDVVD+FP+VAMDTEFPGIV RPVG F+S ADY+Y TLK NV++L
Sbjct: 13 REVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADYHYETLKTNVNIL 72
Query: 93 HLIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRRSGIDFRRN 152
+IQLGLTFS+ +G LP G + C+WQFNFREFD DIFA DSIELL++SGID +N
Sbjct: 73 KMIQLGLTFSNEQGNLPTCGTDKY-CIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKN 131
Query: 153 SERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSSLPDTQAGFFKLMK 212
+ G+D++RFAELLMSSG+VLN++V+WVTFH+GYDFGYLLK+LTC +LPD+Q FFKL+
Sbjct: 132 TLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLIN 191
Query: 213 IYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGESHQAGSDSLVTSCAFWKLKDSFF 272
+YFPTVYDIKHLMKFCNSLHGGLNKLAELL+VERVG HQAGSDSL+TSC F KLK++FF
Sbjct: 192 VYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENFF 251
Query: 273 AGSTEKYAGVLYGLNAEN 290
G KY+GVLYGL EN
Sbjct: 252 VGPLHKYSGVLYGLGVEN 269
>AT5G10960.1 | chr5:3464581-3465414 FORWARD LENGTH=278
Length = 277
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/258 (65%), Positives = 204/258 (79%), Gaps = 1/258 (0%)
Query: 33 REVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDML 92
REVW NL EEFALIR++VD+F ++AMDTEFPG+V +PV F+ D NY TLK NVD+L
Sbjct: 13 REVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTLKENVDLL 72
Query: 93 HLIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRRSGIDFRRN 152
LIQ+GLTFS G LP G + C+WQFNFREF+ DI+AS+SIELLR+ GIDF++N
Sbjct: 73 KLIQVGLTFSDENGNLPTCGT-DKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKN 131
Query: 153 SERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSSLPDTQAGFFKLMK 212
E+G+D RF EL+MSSG+VLND++ WVTFH GYDFGYL+K+LTC LP QA FFKL+
Sbjct: 132 IEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLY 191
Query: 213 IYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGESHQAGSDSLVTSCAFWKLKDSFF 272
+YFPTVYDIKHLM FCN L GGLN+LAEL+ VERVG HQAGSDSL+T +F KLK+ +F
Sbjct: 192 VYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRKLKERYF 251
Query: 273 AGSTEKYAGVLYGLNAEN 290
GSTEKY GVLYGL E+
Sbjct: 252 PGSTEKYTGVLYGLGVED 269
>AT1G15920.2 | chr1:5469962-5470822 FORWARD LENGTH=287
Length = 286
Score = 330 bits (847), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 161/268 (60%), Positives = 201/268 (75%), Gaps = 7/268 (2%)
Query: 33 REVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPA------DYNYATLK 86
REVW NLE+E ALI +D+FP+VAMDTEFPGIVC+ V A +P +YNY TLK
Sbjct: 17 REVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLK 76
Query: 87 ANVDMLHLIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRRSG 146
ANV+ML LIQLGLT S +G LP G ++C+WQFNFREF+ D+FA DSIELLR+S
Sbjct: 77 ANVNMLKLIQLGLTLSDEKGNLPTCGT-NKQCIWQFNFREFNVISDMFALDSIELLRKSA 135
Query: 147 IDFRRNSERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSSLPDTQAG 206
ID +N+E GVDA+RFAELLM SGVVLND ++WVTFH GYDFGYLLK+L+ LP+ +
Sbjct: 136 IDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISD 195
Query: 207 FFKLMKIYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGESHQAGSDSLVTSCAFWK 266
FF M+ +FP VYDIK+LM FC +L+GGL K+AELL V+RVG SHQAGSDSL+T F K
Sbjct: 196 FFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLRTFIK 255
Query: 267 LKDSFFAGSTEKYAGVLYGLNAENVVSA 294
+K+ FF GS KY+G L+GL+ +++
Sbjct: 256 MKEFFFTGSLLKYSGFLFGLDNPRLLTG 283
>AT3G44260.1 | chr3:15952213-15953055 REVERSE LENGTH=281
Length = 280
Score = 279 bits (714), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/261 (55%), Positives = 186/261 (71%), Gaps = 6/261 (2%)
Query: 33 REVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDML 92
REVWA+NLE EF LI +++D++PF++MDTEFPG++ + F +P D Y LKANVD L
Sbjct: 20 REVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTLLKANVDAL 78
Query: 93 HLIQLGLTFSSPRGELPALGPGRRRC-VWQFNFREFDDARDIFASDSIELLRRSGIDFRR 151
LIQ+GLT S G LP LG R +W+FNFR+FD ARD A DSIELLRR GIDF R
Sbjct: 79 SLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFER 138
Query: 152 NSERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSSLPDTQAGFFKLM 211
N GV++ RFAEL+MSSG+V N+ V WVTFH+ YDFGYL+KILT LP F ++M
Sbjct: 139 NCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVM 198
Query: 212 KIYF-PTVYDIKHLMKFCN-SLHGGLNKLAELLDVER-VGESHQAGSDSLVTSCAFWKLK 268
++ F VYD+KH+MKFC L GGL+++A L+V R VG+ HQAGSDSL+T AF +++
Sbjct: 199 RVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMR 258
Query: 269 DSFFA-GSTEKYAGVLYGLNA 288
D +F EK+AGVLYGL
Sbjct: 259 DLYFVQDGPEKHAGVLYGLEV 279
>AT5G22250.1 | chr5:7365605-7366441 REVERSE LENGTH=279
Length = 278
Score = 271 bits (694), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 186/263 (70%), Gaps = 7/263 (2%)
Query: 33 REVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAF--RSPADYNYATLKANVD 90
R+VWA NLE EF LIR +V+++PF++MDTEFPG++ + R +Y Y LK+NVD
Sbjct: 15 RDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLKSNVD 74
Query: 91 MLHLIQLGLTFSSPRGELPALGPGR-RRCVWQFNFREFDDARDIFASDSIELLRRSGIDF 149
L LIQ+GLT S G LP LG + RR +W+FNFR+FD RD A DSIELLRR GIDF
Sbjct: 75 ALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDF 134
Query: 150 RRNSERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSSLPDTQAGFFK 209
RN GV++ RFAEL+MSSG++ N+SV WVTFH+ YDFGYL+KILT LP F
Sbjct: 135 ERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLG 194
Query: 210 LMKIYF-PTVYDIKHLMKFCNS-LHGGLNKLAELLDVER-VGESHQAGSDSLVTSCAFWK 266
L++ +F VYD+KH+M+FC L+GGL+++A L+V R VG+ HQAGSDSL+T AF +
Sbjct: 195 LLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQR 254
Query: 267 LKDSFFA-GSTEKYAGVLYGLNA 288
++D +F EK+AGVLYGL
Sbjct: 255 MRDLYFVEDGAEKHAGVLYGLEV 277
>AT1G06450.1 | chr1:1965924-1967006 FORWARD LENGTH=361
Length = 360
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/267 (39%), Positives = 140/267 (52%), Gaps = 25/267 (9%)
Query: 33 REVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDML 92
R VW N++EE A + + + FP +A DTE+PGI+ R F S +D Y +K NV+
Sbjct: 10 RRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTY--FDSSSDECYRAMKGNVENT 67
Query: 93 HLIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRRSGIDFRRN 152
LIQ G T + +GE+ VW+ NF F D D SIE LRR G+D ++
Sbjct: 68 KLIQCGFTLFNAKGEIGG--------VWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKI 119
Query: 153 SERGVD--ARRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSSLPDTQAGFFKL 210
+ GVD F LM+ V +VTF YDF Y L IL LP+T F
Sbjct: 120 RDEGVDMFGYGFFPKLMTV-FRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATE 178
Query: 211 MKIYFPTVYDIKHLMKFCNSL--HGGLNKLAELLDVERVGESHQAGSDSLVTSCAFWKLK 268
+ F VYD K + FC L H GL+KLA+LL + RVG +H AGSDSL+T+ F KLK
Sbjct: 179 VVKVFGQVYDTKVMAGFCEGLGEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLK 238
Query: 269 ----DSFFAGSTEKYAGVLYGLNAENV 291
DS FA G++YG+ N+
Sbjct: 239 HVYEDSRFA------RGLIYGIGKSNL 259
>AT1G61470.1 | chr1:22678185-22679021 FORWARD LENGTH=279
Length = 278
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 123/240 (51%), Gaps = 21/240 (8%)
Query: 34 EVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDMLH 93
EVW N + E IRD + +A+DTEFPG C + + Y +K NVD H
Sbjct: 4 EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPG--CLKETPMDASDEIRYRDMKFNVDNTH 61
Query: 94 LIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRRSGIDFRRNS 153
LIQLGLT G G + W+ N +F++++ + SI L+ +G+D +
Sbjct: 62 LIQLGLTL---------FGKGITK-TWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIR 111
Query: 154 ERGVDARRFAELLMSSGVVLNDS---VYWVTFHAGYDFGYLLKILTCSSLPDTQAGFFKL 210
E G+ E M +LN+ + WVTF YD YLLK LT LP+T F +
Sbjct: 112 EEGIG---IEEFFMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGLTRKPLPETSKEFDET 168
Query: 211 MKIYFPT-VYDIKHLMKFCNSLHG--GLNKLAELLDVERVGESHQAGSDSLVTSCAFWKL 267
++ VYD+K + C+ L GL ++A++L + RVG++H AGSDS +T+ F KL
Sbjct: 169 VQQLLGRFVYDVKKMAGLCSGLSSRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKL 228
>AT1G27820.1 | chr1:9691628-9692560 FORWARD LENGTH=311
Length = 310
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 123/242 (50%), Gaps = 23/242 (9%)
Query: 34 EVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDMLH 93
EVW N E E IRD + +A+DTEFPG C + + Y +K NVD H
Sbjct: 8 EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPG--CLKETPMDASEEIRYRDMKFNVDNTH 65
Query: 94 LIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRRSGIDFRRNS 153
LIQLG T RG W+ N +FD+ + SI L+ +G++ +
Sbjct: 66 LIQLGFTLFDRRGFAKT---------WEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIR 116
Query: 154 ERGVDA----RRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSS-LPDTQAGFF 208
E G+ R F+++L + + WV F YD YL+K LT LP+T+ F
Sbjct: 117 EEGIGIDEFFRDFSQILTEK----DGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFH 172
Query: 209 K-LMKIYFPTVYDIKHLMKFCNSLHG--GLNKLAELLDVERVGESHQAGSDSLVTSCAFW 265
+ + ++ V+D+K + + C+ L GL ++A++L ++RVG++H AGSDS +T+ F
Sbjct: 173 ETVQQLLGKFVFDVKKIAESCSGLSSQFGLQRIADVLQMKRVGKAHHAGSDSELTARVFT 232
Query: 266 KL 267
KL
Sbjct: 233 KL 234
>AT3G44240.1 | chr3:15940184-15940903 FORWARD LENGTH=240
Length = 239
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 45 ALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDMLHLIQLGLTFSSP 104
+LI D + + F+A+DTEFP + + + Y + +VD LIQLGLT
Sbjct: 2 SLIEDCLRSYRFIAIDTEFPSTLRETTQ--HATDEERYMDMSFSVDRAKLIQLGLTLFDI 59
Query: 105 RGELPALGPGRRRCVWQFNFREF--DDARDIFASDSIELLRRSGIDFRRNSERGVDARRF 162
G + W+ NF +F DDAR+ SIE LRR+G+D R+ E G+ F
Sbjct: 60 NGRIGG--------TWEINFSDFGVDDARN---EKSIEFLRRNGLDLRKIREEGIRIEGF 108
Query: 163 AELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSSLPDTQAGFFKLMKIYFPTVYDIK 222
+ ++ WVTFH YD YLLK T +LP T F K + +VYD+K
Sbjct: 109 FSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLK 168
Query: 223 HLMKFCNSLHG--GLNKLAELLDVERVGESHQAGSDSLVTSCAFWKLKDSF 271
+ C L GL LA + RVG +H AGS++ +T+ F K+ F
Sbjct: 169 VMAGRCEGLSSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219
>AT1G27890.1 | chr1:9714136-9715044 REVERSE LENGTH=303
Length = 302
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 124/242 (51%), Gaps = 23/242 (9%)
Query: 34 EVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDMLH 93
EVW N E E IRD + F +A+DTEFPG C + + Y +K NVD H
Sbjct: 3 EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPG--CLKETPMDASEEIRYRDMKFNVDNTH 60
Query: 94 LIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRRSGIDFRRNS 153
LIQLG T RG W+ N +F++ + SI L+ +G++ +
Sbjct: 61 LIQLGFTLFDRRGITKT---------WEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIG 111
Query: 154 ERGVDA----RRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSS-LPDTQAGFF 208
E G+ R F+++L + + WV F YD YL+K LT LP+T+ F
Sbjct: 112 EEGIGIEEFFRDFSQILKEK----DGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFH 167
Query: 209 KLM-KIYFPTVYDIKHLMKFCNSLHG--GLNKLAELLDVERVGESHQAGSDSLVTSCAFW 265
+ + ++ V+D+K + + C+ L GL ++A++L ++RVG++H AGSDS +T+ F
Sbjct: 168 ETVEQLLGKFVFDVKKIAESCSGLSSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFT 227
Query: 266 KL 267
KL
Sbjct: 228 KL 229
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.139 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,124,973
Number of extensions: 256116
Number of successful extensions: 542
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 507
Number of HSP's successfully gapped: 11
Length of query: 295
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 197
Effective length of database: 8,419,801
Effective search space: 1658700797
Effective search space used: 1658700797
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 111 (47.4 bits)