BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0793300 Os02g0793300|AK072317
         (776 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79690.1  | chr1:29985360-29990171 FORWARD LENGTH=773         1111   0.0  

>AT1G79690.1 | chr1:29985360-29990171 FORWARD LENGTH=773
          Length = 772

 Score = 1111 bits (2873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/775 (68%), Positives = 626/775 (80%), Gaps = 14/775 (1%)

Query: 6   EERLDVLTAGGEKTGASKARSEVHRDGDYHRAVHVWIYSESTGELLLQRRADCKDTWPGQ 65
           EE  DVLT  GEKTG SK R EVHRDGDYHRAVHVWI+ E+T +LLLQ R+D KD+WPGQ
Sbjct: 3   EEHFDVLTKSGEKTGVSKPRGEVHRDGDYHRAVHVWIFVETTQQLLLQLRSDDKDSWPGQ 62

Query: 66  WDISSAGHISAGDSSLSSAQRELDEELGIKLPSDAFELLFVFLQECVINNGTYTNNEYND 125
           WDISSAGHISAGD+SL SAQREL+EELG+KLP DAFE +FVFLQECV N+G + NNE+ND
Sbjct: 63  WDISSAGHISAGDTSLLSAQRELEEELGVKLPKDAFEKIFVFLQECVTNDGKFINNEFND 122

Query: 126 VYLVTTLTPIPLEAFTLQESEVSAVRYMHLDEYKSCLAKESGEYVPYDVNGTYGQLFSII 185
           VYLVT L PIPLEAFTLQ+ EVSAV+Y+  +EY++ L+KE   YVPYDVNG YG+LF II
Sbjct: 123 VYLVTILHPIPLEAFTLQKEEVSAVKYVPYEEYRNFLSKEDPAYVPYDVNGEYGKLFDII 182

Query: 186 EERYKDNIESRSLTLQKQINRYAPIHLEPELTSLSEGDREALGYILKASIVIDDIFYEQV 245
            +R + N E+RSL+LQKQ+ RY+P+ LE +LT LSE D++ALG I+KA+ ++DDIFYEQV
Sbjct: 183 RQRCQVNTEARSLSLQKQLQRYSPVTLEAKLTELSEADQKALGLIVKAAKIMDDIFYEQV 242

Query: 246 WNSNCTLRDWLKARANYSSFDKLKWLYYSINKSPWSCLDENKAFLSTADSAVKLLTDATK 305
           WNSN  LRDWLK  AN S  DKLKW Y++INKSPWS LDEN+AFLSTADSAVKLL  ATK
Sbjct: 243 WNSNPALRDWLKDHANASKLDKLKWDYFTINKSPWSSLDENEAFLSTADSAVKLLPGATK 302

Query: 306 SVSGWKGIEYRAAFPRDNPPGANFYPPDMDKMEFELWKNGLPEKEQKYATGFFTVIKRHD 365
           +++GWKG+EYRAAFP   PPGANFYPPDMDKMEF LW NGL E+++  ATGFF+VIKR  
Sbjct: 303 AIAGWKGLEYRAAFPVTKPPGANFYPPDMDKMEFTLWLNGLTEEQKHAATGFFSVIKRRS 362

Query: 366 ALLPSILAQSDGSNQTKTS--------DDLFVVPYSEEYKSSLEKAAELLHKASECSDSP 417
                  A  D S+   +S         DL+ +PYSE Y+  L+KA+E L KA +   SP
Sbjct: 363 E------ANLDASDHLASSTKKLPDSNSDLYSIPYSEIYRPFLKKASEFLQKAGDLVSSP 416

Query: 418 SLKNLLKTKANAFLSNDYYESDIAWMELDSNLDVTIGPYETYEDGLFSYKATFEAFVGVR 477
           SLK LL +KA AFLSN+YYESDIAWM+LDS LD+TIGPYETYED +F YKATFE F+G+R
Sbjct: 417 SLKKLLHSKAEAFLSNEYYESDIAWMDLDSKLDITIGPYETYEDEIFGYKATFETFIGIR 476

Query: 478 DDIATSQVKLFGDQLRDLEKHLPLDNIYKSDNVSAAPIRVINLLYNSGDVKGPQTIAFNL 537
           DD AT+ +KLFGD L+ LE +LPL+++YKS +VSAAPIRVI L+YNSGDVKGPQT+A+NL
Sbjct: 477 DDKATADLKLFGDNLKLLEDNLPLESVYKSTDVSAAPIRVIQLIYNSGDVKGPQTVAYNL 536

Query: 538 PNDERIVNERGTSMVMLKNISEAKFKHILKPIANACIREEQEDYVDFEPYYTHIVCHECC 597
           PNDE+IV +RGTSMVMLKN+ EAKF+HILKPIA   I +EQ   VDF+ ++TH +CHECC
Sbjct: 537 PNDEKIVKDRGTSMVMLKNVQEAKFEHILKPIAEITISKEQRGLVDFDSFFTHTICHECC 596

Query: 598 HGIGPHSITLPTGKRSTVRMELQEFHSALEEAKADIVGLWALNFLIKKGLLPKSLSESMY 657
           HGIGPH+ITLP G+ STVR ELQE HSA+EEAKADIVGLWAL FLI KGLL KS+ ESMY
Sbjct: 597 HGIGPHTITLPGGQTSTVRKELQEVHSAMEEAKADIVGLWALKFLITKGLLSKSMVESMY 656

Query: 658 VSFLAGCFRSIRFGLEEAHGKGQALQFNWLYEKGAFVLHSDGKFSVDFTKVEDAVESLSR 717
           VSFLAGCFRSIRFGL EAHGKGQALQFN+LYEKGAFV H D  FSVDF K+E AVESLS 
Sbjct: 657 VSFLAGCFRSIRFGLTEAHGKGQALQFNYLYEKGAFVFHEDSTFSVDFAKIEGAVESLSH 716

Query: 718 EILTIQAKGDKPAAQSLLQSHASLTQPLRVALDKIEHMQVPVDITPIFGTANKLL 772
           EILTIQ KGDK AA  LL  + ++T PL+ AL+ +E ++VPVDI+P F  A  L+
Sbjct: 717 EILTIQGKGDKNAATLLLNKYCTITGPLKTALENLERVKVPVDISPTFPLAEALM 771



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.133    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,301,864
Number of extensions: 756777
Number of successful extensions: 1884
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1886
Number of HSP's successfully gapped: 1
Length of query: 776
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 670
Effective length of database: 8,200,473
Effective search space: 5494316910
Effective search space used: 5494316910
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 116 (49.3 bits)