BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0793100 Os02g0793100|AK121357
         (1154 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01780.1  | chr3:279171-283399 FORWARD LENGTH=1177            1350   0.0  

>AT3G01780.1 | chr3:279171-283399 FORWARD LENGTH=1177
          Length = 1176

 Score = 1350 bits (3493), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/950 (68%), Positives = 755/950 (79%), Gaps = 7/950 (0%)

Query: 139  SLSSLLPRDDLALMCSTNPSLMGHATTWWGXXXXXXXXXXXXXXXXXXXXXXXXXQELDA 198
            +L  +L RDDL  +C  N  L+   + WW                          QE D+
Sbjct: 138  TLGCILARDDLVTLCENNVGLLDKVSNWWARIGQNMLDKSDAVSKVAFESVGRLFQEFDS 197

Query: 199  RRMSRLAGDKLVDGEGALAVRAQWAAEAINFIWSRRNMLIARSMVMPVERFRVTVYPIVH 258
            +RMSRLAGDKLVD E +LA+R++W +  ++ +W +R+ L+ARS+V+PVE FR TV+P+V 
Sbjct: 198  KRMSRLAGDKLVDSENSLAIRSKWVSSMVDIVWRKRSALMARSLVLPVETFRATVFPLVF 257

Query: 259  AAKMVASGMVNTLRQIAKPGDTTIDDS---VESSAEKLVGVSDIIXXXXXXXXXXXX-XX 314
            A K VASG V  +RQ++K        +   V+S+AEKLVGVSD++               
Sbjct: 258  AVKAVASGSVEVIRQLSKASSAAAAANATVVDSNAEKLVGVSDLVTHLAPFLASSLDPAL 317

Query: 315  VFEVGINMLALADVPGGKPEWASAATTAILTLWDRQEFSSMRETIVRAVVTNLHLLDLGM 374
            +FEVGINML LADV GGKPEWAS +  AILTLWDRQEFSS RE+IVRAVVTNLHLLDL M
Sbjct: 318  IFEVGINMLYLADVAGGKPEWASQSIIAILTLWDRQEFSSARESIVRAVVTNLHLLDLHM 377

Query: 375  QVSLFKRLLQMVRNLRAESDRMHALACICRTALCVDLFAKESVRRGQKPVPGTDVISLFE 434
            QVSLF+RLL MVRNLRAESDRMHALACICRTALCV LFA+ES RRGQKP+PGTD+ISLFE
Sbjct: 378  QVSLFRRLLLMVRNLRAESDRMHALACICRTALCVHLFARESARRGQKPLPGTDIISLFE 437

Query: 435  DANVKGDLNSITSKSLFREELVASLVESCFQLSLPLPEQKNSGTESRVIXXXXXXXXXXX 494
            DA +K DLNS+TSKSLFREELVA LVESCFQLSLPLPEQKNSG ESRVI           
Sbjct: 438  DARIKDDLNSVTSKSLFREELVAMLVESCFQLSLPLPEQKNSGMESRVIGALAYGTGYGA 497

Query: 495  XNWTEPALDVVEVCRPCVLWDCGGRTYAIDCYLKLLVRLCHIYDTRGGVKTIKAGASQDQ 554
             NWTEPAL+VVEVCRPCV WDC GRTYA+DCYLKLLVRLCHIYDTRGGVK +K GASQDQ
Sbjct: 498  LNWTEPALEVVEVCRPCVKWDCDGRTYAVDCYLKLLVRLCHIYDTRGGVKRLKDGASQDQ 557

Query: 555  ILNETRLRNLQLQLIKDLREVHTPRISGRLIWAISEHFXXXXXXXXXXXXXXXXXNIIIS 614
            ILNETRL+NLQ +L+KDL+EV+TPRI GRLIW I+EH                  NIII+
Sbjct: 558  ILNETRLQNLQRELVKDLQEVNTPRILGRLIWTIAEHIDLEGLDPLLADDPDDPLNIIIA 617

Query: 615  NMHKILFKIDSSTTTSSRIQDVQSVLICAQRLGSRNARAGQLLTKELEEFRASTSADSVT 674
            N+HK+LF +D++ TTS+R+QDVQ+VL+CAQR+GSR+ARAGQLLTKELEE+R   +AD+V+
Sbjct: 618  NIHKVLFNLDAAATTSNRLQDVQAVLLCAQRMGSRHARAGQLLTKELEEYRNHAAADTVS 677

Query: 675  KHQSRYVLQIIKYLTNHPDNRWVGVGDATGDYPFSHHKLTVQFLEASAAQDRKLEGLVHK 734
            KHQ+R +LQ IKY++N P+ +W GV +  GDYPFSHHKLTVQF E SAAQDRKLEGL+HK
Sbjct: 678  KHQTRLILQRIKYVSNLPERKWAGVSETRGDYPFSHHKLTVQFYEPSAAQDRKLEGLIHK 737

Query: 735  AIEELWRPNPTQLTLLQMKGIGALHKELPKT-LSLTGSSDPCYIEAYHLADPTDGRITLH 793
            AI ELWRP PT+LTL   KG+ +   ++P T   LTGSSDPCYIEAYHLAD  DGR+TLH
Sbjct: 738  AILELWRPKPTELTLFLTKGVDSTSIKVPPTAYPLTGSSDPCYIEAYHLADTNDGRVTLH 797

Query: 794  LKILNLTELELHRVDIRVGLSGALYYMDGFSRTVRHLRNLVSQDPVQSSVTVGVSHFERC 853
            LKI+NLTELEL+RVDIRVGLSGALY+MDG  + VR LRNLVSQDPVQ SVTVGVS FERC
Sbjct: 798  LKIINLTELELNRVDIRVGLSGALYFMDGSPQAVRQLRNLVSQDPVQCSVTVGVSQFERC 857

Query: 854  SLWVQVLYYPFYGSGGSADYEGDYAEEDSQTVRQKRSLRPELGEPVVLRCQPYKIPLAEL 913
              WVQVLYYPF G+ G  +Y+GDY EED Q ++QKR  + ELGEPV+LRCQPYKIPL EL
Sbjct: 858  GFWVQVLYYPFRGARG--EYDGDYIEEDPQIMKQKRGSKAELGEPVILRCQPYKIPLTEL 915

Query: 914  LLPYECSPVEYFRLWPSLPAMVECTGTYTYEGSGFKATAAQQYDSSPFLSGLKSISSKPF 973
            LLP++ SPVE+FRLWPSLPA+ E TGTY YEGSGF ATAAQQY +SPFLSGLKS+SSKPF
Sbjct: 916  LLPHKISPVEFFRLWPSLPAVAEYTGTYMYEGSGFMATAAQQYGASPFLSGLKSLSSKPF 975

Query: 974  HQVCSHFIRTVAGFQLCYAAKTWFGGFVGMMIFGASEVSRNVDLGDDTATMICKFVVRAS 1033
            H+VCSH IRTVAGFQLCYAAKTW GGFVGMMIFGASEVSRN+DLGD+T TM+CKFVVRAS
Sbjct: 976  HRVCSHIIRTVAGFQLCYAAKTWHGGFVGMMIFGASEVSRNMDLGDETTTMMCKFVVRAS 1035

Query: 1034 DESITREIQSDLQGWLDDITDGAVEYMPEEEVKSAAAERLKVSMERIALL 1083
            + SIT++I+SD+QGW DD+TDG VEYMPE+EVK+ AAE+LK+SMERIALL
Sbjct: 1036 EASITKQIESDIQGWCDDLTDGGVEYMPEDEVKATAAEKLKISMERIALL 1085




 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/30 (80%), Positives = 26/30 (86%)

Query: 1120 TLSKLTAEEAEHRALQAAVLQEWHQLCKEK 1149
            T SKLTAEE EH ALQAAVLQEWH LCK++
Sbjct: 1141 TFSKLTAEETEHMALQAAVLQEWHILCKDR 1170



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.133    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,634,617
Number of extensions: 715051
Number of successful extensions: 1674
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1668
Number of HSP's successfully gapped: 2
Length of query: 1154
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 1045
Effective length of database: 8,118,225
Effective search space: 8483545125
Effective search space used: 8483545125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)