BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0781500 Os02g0781500|Os02g0781500
(765 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22530.1 | chr2:9572971-9577441 REVERSE LENGTH=959 620 e-178
AT5G17250.1 | chr5:5668993-5673516 REVERSE LENGTH=926 178 1e-44
AT3G01380.1 | chr3:144288-149828 REVERSE LENGTH=994 62 1e-09
>AT2G22530.1 | chr2:9572971-9577441 REVERSE LENGTH=959
Length = 958
Score = 620 bits (1599), Expect = e-178, Method: Compositional matrix adjust.
Identities = 349/691 (50%), Positives = 435/691 (62%), Gaps = 72/691 (10%)
Query: 17 WTVTAVLLQVVGLSMFLYGFFPVKPTLPGFSGAESYRMPSCGLAGGGEQPALP-PDQLRS 75
+TV +LLQ++GLS+F++GFFPVKPTL G SG+ESYR P C + + L P++LR
Sbjct: 14 FTVAGILLQIIGLSIFVFGFFPVKPTLSGVSGSESYRDPFCDSSLISNESELHHPEKLRL 73
Query: 76 LYRELSEVPPVYDRLVLMVIDGLPAEFVLGRVGKPPSKEMVESMPYTQSLLAGCKATGYH 135
LY+ELS + YDRL+LMVIDGLPAEFVLG+ GKPP K + ESMPYTQSLLA A GYH
Sbjct: 74 LYQELSGISSKYDRLILMVIDGLPAEFVLGKDGKPPEKVLKESMPYTQSLLANGDAIGYH 133
Query: 136 AKAAPPTVTMPRLKAMVSGAIGGFLDVAFNFNTQAFLDDNLLDQLHMIGYKLVMLGDETW 195
AKAAPPTVTMPRLKAMVSGAIGGFLDVAFNFNTQA LDDN+L Q IG+K+VMLGDETW
Sbjct: 134 AKAAPPTVTMPRLKAMVSGAIGGFLDVAFNFNTQALLDDNILGQFFRIGWKMVMLGDETW 193
Query: 196 IKLFPKLFWRQDGVSSFYVKDTVEVDFNVSRHLESEFAAKDWNMLILHYLGLDHVGHIGG 255
+KLFP LF R DGVSSF+VKDTV+VD NVSRHL E + DWN+LILHYLGLDHVGH GG
Sbjct: 194 LKLFPGLFMRHDGVSSFFVKDTVQVDRNVSRHLPDELNSDDWNLLILHYLGLDHVGHTGG 253
Query: 256 RQSVLMPQKLKEMDDVIRRVH-NAVSGLEDNLDRTLLVVVSDHGMTEGGNHGGSSYEETD 314
R S LMP KLKEMDD++R +H A+ + +TLL++VSDHGMTE GNHGGSSYEETD
Sbjct: 254 RNSPLMPAKLKEMDDIVRTMHLRAMMDRSHDQGQTLLIIVSDHGMTENGNHGGSSYEETD 313
Query: 315 SLALFIGHSVQSSYCSPYDQNEALQVDLAPTLSLLFGTPIPKNNIGVVLPEVFNSLTVDC 374
SL LFIG + S + N A QVDLAPTL+LLFG PIPKNN+GV++P SL
Sbjct: 314 SLMLFIGLNSNISDYASATNNVAFQVDLAPTLALLFGVPIPKNNVGVLVPGTLCSL---- 369
Query: 375 YVYIYTISKDVSGSCGSATTTTQLPYQQKLRTLELNSLQFLRLLQAQLPAF--------C 426
+D ++LR LELNS Q LRL+ AQ+ + C
Sbjct: 370 --------RDF----------------EQLRALELNSWQLLRLMLAQIQSSSFPRVSCNC 405
Query: 427 FEDCINSKYGLGIDKIPQSVEKKLCHLLSKAFDSHHPSHLHQTSNVKSIEAGCNRTAVNA 486
F D L I + EK+L L A H +++ S +R A++A
Sbjct: 406 FLDGTCEGLDLDISECSGDKEKQLICLFRNAAALHGIWKSKKSTESSSTMEDFSR-ALDA 464
Query: 487 YYEFLRYASEWLSHRATNKPFYLLVSAISLMIVSCLSLMGIVSCLLKGKSLSQFEHHSE- 545
Y FL+ ASEWL+ + T KP LL +S M++SC + L K + H +
Sbjct: 465 YNTFLKTASEWLASKTTEKPVLLLGLGVSAMLLSCFICGTVFLSLFK-----EVYHEPKD 519
Query: 546 --WNSDYHWHLDEVFIIMGIFLYVSSLGSSSFVEEEQYTWHYLTSTLYLIFLIKTTQSML 603
+ +L+EVFI + + V S+GSSS VEEE Y WH++ ST +L+ L KT +S
Sbjct: 520 RVCSLSNLLNLEEVFIFALLLILVISMGSSSMVEEEHYIWHFMVSTFHLLLLFKTAKS-- 577
Query: 604 RESNSAVARAEGKIFHGNDCSYFTSCKLIPSMRDGYKLCTIIIILVSGRILRAWHQGGVN 663
F K + +RD +K +I +L+SGR+LR WHQGGVN
Sbjct: 578 ----------------------FKISKGMNILRD-FKFGSIFSLLISGRLLRGWHQGGVN 614
Query: 664 WVHFPDISKSLAQADSFVVKALQIISVLAVV 694
W + PDISK L Q S VK +Q+IS++ V+
Sbjct: 615 WTYLPDISKWLVQGGSGYVKWIQLISIILVI 645
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 724 KKWVQIVAMQLLGLSGHFGLGNTNNLASIDVAGAFI 759
+WV+I A+ +G++GHF LGN+N LA+IDVAGAFI
Sbjct: 782 NEWVEITALYYMGMAGHFALGNSNTLATIDVAGAFI 817
>AT5G17250.1 | chr5:5668993-5673516 REVERSE LENGTH=926
Length = 925
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 28/369 (7%)
Query: 22 VLLQVVGLSMFLYGFFPVKPTLPGFSGAESYRMPSCGLAGGGEQPALPPDQLRSLYRELS 81
+L+ + + +F GF + LP S + C + + ++ + +
Sbjct: 16 LLIHAIAILIFTRGFLLTRTELPFHSTCSDVSLSPCLASPRSNHDSSSGQSNQTQPKCWT 75
Query: 82 EVPPVYDRLVLMVIDGLPAEFVLGRVGKPPSKEMVESMPYTQSLLAGCKATG--YHAKAA 139
+ PV DR++++V+D L +FV P K ++ + Q+L ++ + A A
Sbjct: 76 K--PVVDRVIIIVLDALRIDFVAPSAFFPEPKPWMDKLTILQTLAFANDSSAKIFKAFAD 133
Query: 140 PPTVTMPRLKAMVSGAIGGFLDVAFNFNTQAFLDDNLLDQLHMIGYKLVMLGDETWIKLF 199
PPT ++ RLK + +G + F+D+ +F A ++DN ++QL + G +LVM+GD+TW +LF
Sbjct: 134 PPTTSLQRLKGLTTGGLPTFIDIGNSFGAPAIVEDNFINQLVLNGKRLVMMGDDTWTQLF 193
Query: 200 PKLFWRQDGVSSFYVKDTVEVDFNVSRHLESEFAAKDWNMLILHYLGLDHVGHIGGRQSV 259
P F + SF VKD VD HL DW++LI H+LG+DH GHI G S
Sbjct: 194 PNQFQKSYPFPSFNVKDLDTVDNGCIEHLFPTLFKDDWDVLIAHFLGVDHAGHIFGVDSS 253
Query: 260 LMPQKLKEMDDVIRRVHNAVS------GLEDNLDRTLLVVVSDHGMTEGGNHGGSSYEET 313
M KL++ + V+ +V N + GL +N T+L+V+ DHG T G+HGG + EE
Sbjct: 254 PMINKLEQYNSVLEKVINILESQAGPGGLHEN---TMLIVMGDHGQTLNGDHGGGTAEEV 310
Query: 314 DSLALFIGHSVQSSYCSP-YD-----QNE---------ALQVDLAPTLSLLFGTPIPKNN 358
++ + ++ P +D QN+ Q+D A TLS L G P +
Sbjct: 311 ETTMFAMSTKKHTTLVPPEFDTSSCKQNKDGKQMCISYIEQLDFAATLSALLGISFPFGS 370
Query: 359 IGVVLPEVF 367
IG V PE++
Sbjct: 371 IGHVNPELY 379
>AT3G01380.1 | chr3:144288-149828 REVERSE LENGTH=994
Length = 993
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 132/332 (39%), Gaps = 62/332 (18%)
Query: 80 LSEVPPVYD-----RLVLMVIDGLPAEFVLGRVGKPPSKEMVESMPYTQSLLAGCKATGY 134
+ VPP + RLVL++ DGL A+ P +E P+ ++++ G
Sbjct: 74 MDPVPPRFSEPPAKRLVLLISDGLRADKFF-----EPDEEGKYRAPFLRNIIKNQGRWGV 128
Query: 135 HAKAAPPTVTMPRLKAMVSGAIGGFLDVAFNFNTQAFLDDNLLDQLH---------MIGY 185
+ A PPT + P A+++G V + D++ +Q +I
Sbjct: 129 -SHARPPTESRPGHVAIIAGFYEDPSAVTKGWKANPVEFDSVFNQSRHTFAFGSPDIIPI 187
Query: 186 KLVMLGDETWIKLFPKLFWRQDGVSSF---YVKDTVEVDFNVSRHLE---SEFAAKDWNM 239
L TW +P + +SF + D E N S H + E +D +
Sbjct: 188 FCSALPHSTW-NSYPHEYEDFATDASFLDEWSFDQFEGLLNRS-HADPKLKELLHQDKLV 245
Query: 240 LILHYLGLDHVGHIGGRQSVLMPQKLKEMDDVIRRVHNAVSGLEDNL--DRTLLVVVSDH 297
+ LH LG D GH S + +K +D + RV++ LED +RT + +DH
Sbjct: 246 VFLHLLGCDSNGHAHRPYSSIYLNNVKVVDKIAERVYHL---LEDYYRDNRTSYIFTADH 302
Query: 298 GMTEGGNHGGSSYEETDSLALFIGHSVQ----------------------SSYCSPYD-- 333
GM++ G+HG TD+ + G +Q +PYD
Sbjct: 303 GMSDKGSHGDGHPTNTDTPLVAWGAGIQYPKPASGNSHSDSVTTFVDKHAHDMPTPYDWG 362
Query: 334 -----QNEALQVDLAPTLSLLFGTPIPKNNIG 360
+ + Q D+AP +S L G P P N++G
Sbjct: 363 LRRVERVDVNQADIAPLMSTLLGLPCPVNSVG 394
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,148,829
Number of extensions: 686071
Number of successful extensions: 1569
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1559
Number of HSP's successfully gapped: 4
Length of query: 765
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 659
Effective length of database: 8,200,473
Effective search space: 5404111707
Effective search space used: 5404111707
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 116 (49.3 bits)