BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0778500 Os02g0778500|AK107205
         (427 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26310.1  | chr2:11201770-11203919 FORWARD LENGTH=399          311   4e-85
AT3G63170.1  | chr3:23334675-23335993 FORWARD LENGTH=280          146   2e-35

>AT2G26310.1 | chr2:11201770-11203919 FORWARD LENGTH=399
          Length = 398

 Score =  311 bits (797), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 171/374 (45%), Positives = 229/374 (61%), Gaps = 18/374 (4%)

Query: 63  EAFSCFNKFAGAFYFWLSRASNPKIFHRLSAIAGSSSRACQSQIKQVTSCMQHLAGLRFG 122
           EAFSC +KF GA   W S  +  K   +        SR     +K V    +H     F 
Sbjct: 33  EAFSCISKFTGALLCWFSHGNLQKEVSKHQWGLTCKSR---DSLKHV---FEHRNVSVFP 86

Query: 123 SQVREEHAIQILLAKLANATFGRLWNEVEERHACNILMLAAATVPPFENISPKMLADSMT 182
                +         ++ +T     NE E  H+C++L LAAA +P    +S   LA  + 
Sbjct: 87  FHYVSKDISPGFFGNISKSTIQHFVNEAERLHSCSLLSLAAAMIPSLNVMSANGLA--LP 144

Query: 183 LGRDNGRTREPVDQHSLEENHSGCTC---------VAVPRIILPEDATEPKTGIKFPTLL 233
           LG ++ + RE ++  +  EN    TC         ++  ++     + EP+TGI+FP LL
Sbjct: 145 LGSNDVKLRENIEHRTCPENTEHRTCQVGCEEYSGLSFQKLDWTRQSVEPRTGIEFPMLL 204

Query: 234 EDN-SNPTSEVLVGMGFRSMRIMRVKNLNLYAFGLYIQPDSICKRLSPKYASVPVSELKD 292
           ++N S   SEVLV  G R+M+I+R+K+L +YAFG Y+ P S+C++L  KYASVP S+L  
Sbjct: 205 KENASRSNSEVLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQKLGRKYASVPASKLDK 264

Query: 293 HPDFYEDLLRENIHMTVRLIVSYNGLSIGTVRDAFEKSLCFRLQKMNPNTDYHCLKTFGS 352
             D Y+DLLRE+I M+VRL+V+YNGL I TVRD FEKSL  RL K NP TD++CL  FGS
Sbjct: 265 CDDLYKDLLREDIVMSVRLVVNYNGLKINTVRDVFEKSLRARLVKANPKTDFNCLNDFGS 324

Query: 353 YFSEDICIPAGTKIDFRQTSDGQLITEIDGKQIGAVQSKDLCRAFFDMYIGDPPVSVETK 412
           +F +DI IPAGT IDFR+T DGQLITEI G  IGAV+SKDLCRAFF MYIGD PVS +TK
Sbjct: 325 FFRQDIPIPAGTIIDFRRTEDGQLITEIGGNLIGAVRSKDLCRAFFGMYIGDVPVSEQTK 384

Query: 413 QDIAQNVGGLIRRC 426
           ++I + V G+I+RC
Sbjct: 385 EEIGRKVVGIIKRC 398



>AT3G63170.1 | chr3:23334675-23335993 FORWARD LENGTH=280
          Length = 279

 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 119/205 (58%), Gaps = 5/205 (2%)

Query: 218 EDATEPKTGIKFPTLLEDNSNPTSEVLVGMGFRSMRIMRVKNLNLYAFGLYIQPDSICKR 277
           E   EPKTG  FP  + D     S  L+G+G R   ++ +KN+++YAFG+Y   D + K 
Sbjct: 76  ESVVEPKTGFSFPASIGD-----SRRLLGVGLRKKSLLGLKNIDVYAFGVYADCDDVKKL 130

Query: 278 LSPKYASVPVSELKDHPDFYEDLLRENIHMTVRLIVSYNGLSIGTVRDAFEKSLCFRLQK 337
           +  KYA++P SE++ +  F +DL+  +I MT+RL + Y  L+I +VR+AF++S+  RL+K
Sbjct: 131 VGDKYANLPASEIRGNKSFMDDLMEADIKMTIRLQIVYGKLNIRSVRNAFQESVGNRLKK 190

Query: 338 MNPNTDYHCLKTFGSYFSEDICIPAGTKIDFRQTSDGQLITEIDGKQIGAVQSKDLCRAF 397
              + +   L++F S F ++  IP  + ID  +     L   I+G  +G+V+S  LCR+ 
Sbjct: 191 FGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSVAIEGNHVGSVKSHLLCRSI 250

Query: 398 FDMYIGDPPVSVETKQDIAQNVGGL 422
            D+YIG+ P     ++D   N   L
Sbjct: 251 LDLYIGEEPFDKNAREDFLDNAASL 275



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.137    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,904,837
Number of extensions: 421963
Number of successful extensions: 863
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 859
Number of HSP's successfully gapped: 2
Length of query: 427
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 326
Effective length of database: 8,337,553
Effective search space: 2718042278
Effective search space used: 2718042278
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)