BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0778400 Os02g0778400|AK103372
(214 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G26667.1 | chr5:9276659-9277788 FORWARD LENGTH=209 297 3e-81
AT3G60180.2 | chr3:22242781-22244015 REVERSE LENGTH=205 271 2e-73
AT4G25280.1 | chr4:12939068-12940723 REVERSE LENGTH=250 215 2e-56
AT3G60961.1 | chr3:22541319-22552253 FORWARD LENGTH=137 175 2e-44
AT5G47840.1 | chr5:19375488-19378058 FORWARD LENGTH=284 97 5e-21
AT5G35170.1 | chr5:13419278-13423482 FORWARD LENGTH=589 91 3e-19
AT5G50370.1 | chr5:20509382-20510631 REVERSE LENGTH=249 80 6e-16
AT5G63400.1 | chr5:25393274-25394817 REVERSE LENGTH=247 80 1e-15
AT2G37250.1 | chr2:15641991-15643318 FORWARD LENGTH=285 75 2e-14
AT2G39270.1 | chr2:16399983-16401408 FORWARD LENGTH=296 69 1e-12
>AT5G26667.1 | chr5:9276659-9277788 FORWARD LENGTH=209
Length = 208
Score = 297 bits (761), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/186 (78%), Positives = 159/186 (85%)
Query: 25 KKVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGK 84
KK TV+FVLGGPGSGKGTQCA IVEH+G+ HLSAGDLLRAEIKSGSENGTMI+NMIKEGK
Sbjct: 12 KKPTVIFVLGGPGSGKGTQCAYIVEHYGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGK 71
Query: 85 IVPSEVTIKLLQEAMIKSGNDKFLIDGFPRNEENRAAFENVTKITPAFVLFFDCSEEEME 144
IVPSEVTIKLLQ+A+ ++GNDKFLIDGFPRNEENRAAFE VT+I P FVLFFDC EEEME
Sbjct: 72 IVPSEVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEPKFVLFFDCPEEEME 131
Query: 145 RRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEYYNAXXXXXXXXXXXXXXEVFEDVKA 204
+RLLGRNQGR DDNIETIRKRFKVF+ESSLPVI YY A VFE+VKA
Sbjct: 132 KRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAKPIEAVFEEVKA 191
Query: 205 IFAPYA 210
IF+P A
Sbjct: 192 IFSPEA 197
>AT3G60180.2 | chr3:22242781-22244015 REVERSE LENGTH=205
Length = 204
Score = 271 bits (693), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/183 (70%), Positives = 149/183 (81%)
Query: 25 KKVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGK 84
KK TVVFVLGGPGSGKGTQCAN+V+HF + H SAGDLLRAEIKSGSE G MI++MI EG+
Sbjct: 19 KKSTVVFVLGGPGSGKGTQCANVVKHFSYTHFSAGDLLRAEIKSGSEFGAMIQSMIAEGR 78
Query: 85 IVPSEVTIKLLQEAMIKSGNDKFLIDGFPRNEENRAAFENVTKITPAFVLFFDCSEEEME 144
IVPSE+T+KLL +AM +SGNDKFLIDGFPRNEENR FENV +I PAFVLFFDC EEE+E
Sbjct: 79 IVPSEITVKLLCKAMEESGNDKFLIDGFPRNEENRNVFENVARIEPAFVLFFDCPEEELE 138
Query: 145 RRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEYYNAXXXXXXXXXXXXXXEVFEDVKA 204
RR++ RNQGR DDNIETI+KRFKVFVES+LP+I YY + EVFE V+
Sbjct: 139 RRIMSRNQGREDDNIETIKKRFKVFVESTLPIISYYESKGKLRKINAAKSSEEVFEAVRV 198
Query: 205 IFA 207
+FA
Sbjct: 199 LFA 201
>AT4G25280.1 | chr4:12939068-12940723 REVERSE LENGTH=250
Length = 249
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 126/181 (69%)
Query: 29 VVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPS 88
+ FVLGGPGSGKGTQC IVE FG HLSAGDLLR EI +ENG MI N+IK+GKIVPS
Sbjct: 45 ITFVLGGPGSGKGTQCEKIVETFGLQHLSAGDLLRREIAMHTENGAMILNLIKDGKIVPS 104
Query: 89 EVTIKLLQEAMIKSGNDKFLIDGFPRNEENRAAFENVTKITPAFVLFFDCSEEEMERRLL 148
EVT+KL+Q+ + S N KFLIDGFPR EENR AFE + + P VLFFDC EEEM +R+L
Sbjct: 105 EVTVKLIQKELESSDNRKFLIDGFPRTEENRVAFERIIRADPDVVLFFDCPEEEMVKRVL 164
Query: 149 GRNQGRVDDNIETIRKRFKVFVESSLPVIEYYNAXXXXXXXXXXXXXXEVFEDVKAIFAP 208
RNQGR+DDNI T++KR K+F + PVI+YY ++F+ V IF
Sbjct: 165 NRNQGRIDDNITTMKKRLKIFNALNRPVIDYYKNKGKLYTINAVGTVDDIFQHVLPIFNS 224
Query: 209 Y 209
+
Sbjct: 225 F 225
>AT3G60961.1 | chr3:22541319-22552253 FORWARD LENGTH=137
Length = 136
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 101/133 (75%), Gaps = 4/133 (3%)
Query: 79 MIKEGKIVPSEVTIKLLQEAMIKS----GNDKFLIDGFPRNEENRAAFENVTKITPAFVL 134
MI EG+IVPSE+T+KLL +AM +S GNDKFLIDGFPRNEENR FENV +I PAFVL
Sbjct: 1 MIAEGRIVPSEITVKLLCKAMEESFQVSGNDKFLIDGFPRNEENRIVFENVARIEPAFVL 60
Query: 135 FFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEYYNAXXXXXXXXXXXX 194
FFDC EEE+ERR++ RNQGR DDNIETI+KRFKVFVES+LP+I YY +
Sbjct: 61 FFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVESTLPIISYYQSKGKLRKINAAKS 120
Query: 195 XXEVFEDVKAIFA 207
EVFE V+ +FA
Sbjct: 121 SEEVFEAVRVLFA 133
>AT5G47840.1 | chr5:19375488-19378058 FORWARD LENGTH=284
Length = 283
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 30 VFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSE 89
+ + G P SGKGTQC I +G +H+SAGDLLRAEI SGSENG + +++G++VP E
Sbjct: 67 IMISGAPASGKGTQCELITHKYGLVHISAGDLLRAEIASGSENGRRAKEHMEKGQLVPDE 126
Query: 90 VTIKLLQEAMIKSGNDK--FLIDGFPRNEENRAAFENVTKITPAFVLFFDCSEEEMERRL 147
+ + ++++ + ++ +++ +L+DG+PR+ A + P + + EE + R+
Sbjct: 127 IVVMMVKDRLSQTDSEQKGWLLDGYPRSASQATALKGFG-FQPDLFIVLEVPEEILIERV 185
Query: 148 LGRN 151
+GR
Sbjct: 186 VGRR 189
>AT5G35170.1 | chr5:13419278-13423482 FORWARD LENGTH=589
Length = 588
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 28/179 (15%)
Query: 30 VFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSE 89
V + G P SGKGTQC IV FG +H+S GDLLRAE+ SG++ G + + G +VP E
Sbjct: 82 VMISGAPASGKGTQCELIVHKFGLVHISTGDLLRAEVSSGTDIGKRAKEFMNSGSLVPDE 141
Query: 90 VTIKLLQEAMIK--SGNDKFLIDGFPRNEENRAAFENVTKITPAFVLFFDCSEEEMERRL 147
+ I ++ + + + +L+DGFPR+ + + + + P + D +E + R
Sbjct: 142 IVIAMVAGRLSREDAKEHGWLLDGFPRSFAQAQSLDKLN-VKPDIFILLDVPDEILIDRC 200
Query: 148 LGRNQG-------------------------RVDDNIETIRKRFKVFVESSLPVIEYYN 181
+GR R DD E ++ R +++ ++S +I Y+
Sbjct: 201 VGRRLDPVTGKIYHIKNYPPESDEIKARLVTRPDDTEEKVKARLQIYKQNSEAIISAYS 259
>AT5G50370.1 | chr5:20509382-20510631 REVERSE LENGTH=249
Length = 248
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 34/185 (18%)
Query: 29 VVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPS 88
+VF+ G PGSGKGTQ I + F HLS GD+LRA + + + G + + +G++V
Sbjct: 37 LVFI-GPPGSGKGTQSPVIKDEFCLCHLSTGDMLRAAVAAKTPLGVKAKEAMDKGELVSD 95
Query: 89 EVTIKLLQEAMIKSGNDK-FLIDGFPRNEENRAAFENVTKITPAF---VLFFDCSEEEME 144
++ + ++ EAM + K F++DGFPR + + A VL F + +E
Sbjct: 96 DLVVGIMDEAMNRPKCQKGFILDGFPRTVTQAEKLDEMLNRRGAQIDKVLNFAIDDSVLE 155
Query: 145 RRLLGR----NQGRV-------------------------DDNIETIRKRFKVFVESSLP 175
R+ GR + GR DDN + +R R F + + P
Sbjct: 156 ERITGRWIHPSSGRSYHTKFAPPKVPGVDDLTGEPLIQRKDDNADVLRSRLDAFHKQTQP 215
Query: 176 VIEYY 180
VI+YY
Sbjct: 216 VIDYY 220
>AT5G63400.1 | chr5:25393274-25394817 REVERSE LENGTH=247
Length = 246
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 33/211 (15%)
Query: 30 VFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSE 89
+ +G PGSGKGTQ + + + HLS GD+LRA + S + G + +++G++V +
Sbjct: 36 LIFIGPPGSGKGTQSPVVKDEYCLCHLSTGDMLRAAVASKTPLGVKAKEAMEKGELVSDD 95
Query: 90 VTIKLLQEAMIKSGNDK-FLIDGFPRNEENRAAFENVTKITPA---FVLFFDCSEEEMER 145
+ + ++ EAM K K F++DGFPR + + K VL F + +E
Sbjct: 96 LVVGIIDEAMNKPKCQKGFILDGFPRTVTQAEKLDEMLKRRGTEIDKVLNFAIDDAILEE 155
Query: 146 RLLGR----NQGRV-------------------------DDNIETIRKRFKVFVESSLPV 176
R+ GR + GR DDN + ++ R F + PV
Sbjct: 156 RITGRWIHPSSGRSYHTKFAPPKTPGVDDITGEPLIQRKDDNADVLKSRLAAFHSQTQPV 215
Query: 177 IEYYNAXXXXXXXXXXXXXXEVFEDVKAIFA 207
I+YY EV +VK +
Sbjct: 216 IDYYAKKAVLTNIQAEKAPQEVTSEVKKALS 246
>AT2G37250.1 | chr2:15641991-15643318 FORWARD LENGTH=285
Length = 284
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 82/201 (40%), Gaps = 46/201 (22%)
Query: 24 DKKVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEG 83
D+ V VF LG PG GKGT + + G H++ GDL+R E+ S + ++ +G
Sbjct: 49 DRNVQWVF-LGCPGVGKGTYASRLSTLLGVPHIATGDLVREELASSGPLSQKLSEIVNQG 107
Query: 84 KIVPSEVTIKLLQ---EAMIKSGNDKFLIDGFPRNEENRAAFENVTKITPAFVLFFDCSE 140
K+V E+ + LL EA G F++DGFPR +VT I V+ E
Sbjct: 108 KLVSDEIIVDLLSKRLEAGEARGESGFILDGFPRTMRQAEILGDVTDID--LVVNLKLPE 165
Query: 141 EEMERRLLGRNQ----------------------------------------GRVDDNIE 160
E + + LGR R DD E
Sbjct: 166 EVLVDKCLGRRTCSQCGKGFNVAHINLKGENGRPGISMDPLLPPHQCMSKLVTRADDTEE 225
Query: 161 TIRKRFKVFVESSLPVIEYYN 181
++ R +++ E+S P+ EYY
Sbjct: 226 VVKARLRIYNETSQPLEEYYR 246
>AT2G39270.1 | chr2:16399983-16401408 FORWARD LENGTH=296
Length = 295
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 47/192 (24%)
Query: 33 LGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGKIVPSEVTI 92
LG PG GKGT + + G H++ GDL+R E+ S + ++ ++ GK+VP E I
Sbjct: 70 LGCPGVGKGTYASRLSSLLGVPHIATGDLVREELSSSGLLSSQLKELVNHGKLVPDEFII 129
Query: 93 KLLQEAMIKSGNDK----FLIDGFPRNEENRAAFENVTKITPAFVLFFDCSEEEMERRLL 148
LL + + ++G DK +++DGFPR E VT I V+ EE + + L
Sbjct: 130 SLLSKRL-QAGKDKGESGYILDGFPRTVTQAEILEGVTNID--LVINLKLREEALLAKCL 186
Query: 149 GRN----------------------------------------QGRVDDNIETIRKRFKV 168
GR R DD E +++R ++
Sbjct: 187 GRRICSECGGNYNVACIDIKGDDDTPRMYMPPLLPPPNCESKLISRADDTEEVVKERLRI 246
Query: 169 FVESSLPVIEYY 180
+ + + PV E+Y
Sbjct: 247 YNKMTQPVEEFY 258
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,425,929
Number of extensions: 186966
Number of successful extensions: 574
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 567
Number of HSP's successfully gapped: 10
Length of query: 214
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 120
Effective length of database: 8,529,465
Effective search space: 1023535800
Effective search space used: 1023535800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)