BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0776700 Os02g0776700|AK070394
(621 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G72650.2 | chr1:27350253-27353483 FORWARD LENGTH=631 262 5e-70
AT1G17460.2 | chr1:5999519-6002546 FORWARD LENGTH=625 255 6e-68
AT2G37025.1 | chr2:15550042-15551957 FORWARD LENGTH=411 85 1e-16
AT3G53790.1 | chr3:19928478-19930267 FORWARD LENGTH=355 54 2e-07
AT1G07540.1 | chr1:2318433-2321048 REVERSE LENGTH=631 54 3e-07
AT3G46590.2 | chr3:17153642-17155946 FORWARD LENGTH=554 52 8e-07
AT5G59430.1 | chr5:23968254-23970695 FORWARD LENGTH=579 51 1e-06
AT5G13820.1 | chr5:4461694-4464355 FORWARD LENGTH=641 51 2e-06
AT3G12560.1 | chr3:3982272-3984848 REVERSE LENGTH=620 50 4e-06
>AT1G72650.2 | chr1:27350253-27353483 FORWARD LENGTH=631
Length = 630
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 215/643 (33%), Positives = 315/643 (48%), Gaps = 121/643 (18%)
Query: 27 PVVYQLVRVEGDGTLIPATEDEVLQF-ETFLH--------------DE---KVDD-DLPS 67
PV Y+LVRV GDG+L+PAT++E+L+ +T +H DE +VD+ D+
Sbjct: 35 PVAYKLVRVSGDGSLVPATDEEILEVNDTDMHIPSDTCQTIGYLATDEENVEVDETDMHI 94
Query: 68 IDDVTHVEEYFTNDCIVKKPEFEEGPSKLDTADVQTQKLDAG-LEEDRLCTLNDSIVLPS 126
D Y + I PS+L + ++ +++G L D + D +
Sbjct: 95 ASDACQTIGYLPAEGI---------PSRLSQIE-SSEAINSGLLHSDNVQPYTDQV---K 141
Query: 127 NCSAVHDQQLDKLNTEQ---------------GANIIAQQDNASTETTK---STVLND-- 166
+ S +++ L K+ E+ ANI +N E + +L D
Sbjct: 142 SRSEYNEEMLQKVEQEERLENVHGSQMPSTPADANIQCSNENNFFEEDQVHHEALLQDEC 201
Query: 167 LSSDKEKADACSKPVNEASAGQSVSGVTSSVPDFSILKGEVCLDDLTMRELQEAFRATFG 226
++ + + CS V AS ++ + PDFS ++GE+CLD+L ++ LQE FRATFG
Sbjct: 202 KMNESDMMERCSNAV--ASPKETALSAAAQKPDFSRVRGEICLDNLPIKALQETFRATFG 259
Query: 227 RQTTVKDKLWLKRRIAMGLINSCDVPSSGCVVRDYKVIAMGAKQEIPVVEAIPKM---EL 283
R TTVKDK WLKRRIAMGLINSCDVP++ V+D K+I K V AI K ++
Sbjct: 260 RDTTVKDKTWLKRRIAMGLINSCDVPTTNLRVKDNKLIGNQEKSN-DVTNAIRKEMGDDV 318
Query: 284 EANLVRDQVMNPGHERDLPSSLSYHSEEQQRSSKRLKRVPTDNDEPQVTIFAEQGTTKRI 343
A ++D + H + +++ + SS EQ KR+
Sbjct: 319 RATKMKDAPSSTDHVNGHSNGGNHYYASEDYSS-------------------EQRAAKRV 359
Query: 344 RKPTKRYIEELSDIDTHESTGRLSSPGKRHVYDEVLLRPRIAPLHEVDSLSTAYP----- 398
RKPT+RYIEELS+ D + + P K R++ EV S+S +
Sbjct: 360 RKPTRRYIEELSETDDKQQNDKSVIPSKDQ---------RLSEKSEVRSISVSSGKRVTV 410
Query: 399 TREDTLGGCSVHVPYVSRMRRGRPRSNFIPFLDPEPSVECTEAPAA-------------D 445
TR +L G + VPYVS +RR RPR N + L S +A AA +
Sbjct: 411 TRMVSLAGSEIEVPYVSHVRRSRPRENIMALLGCHSSYLEDKASAAESNLNLSPSQLSSE 470
Query: 446 VVN---LEKEGER--KNHKNTGKKGV--HVETSCEKDVQGLQ-DKDFCDSDDNP-----K 492
VVN +EK R +N T + H+ + +++++ D SD+N
Sbjct: 471 VVNRDSVEKSASRPVQNEFATSDENNVEHILSEVDQEMEPEHIDSSGNSSDENNIGVPIM 530
Query: 493 TXXXXXXXXXXAWTLCEVVKLVDGVARYGAGKWSEIRRLAFSSYSYRTSVDLKDKWRNLI 552
AWTL E+ KLV+GV++YGAGKWSEI++ FSS+SYRTSVDLKDKWRNL+
Sbjct: 531 QGGALRRKHHRAWTLSEIAKLVEGVSKYGAGKWSEIKKHLFSSHSYRTSVDLKDKWRNLL 590
Query: 553 RASQTQLSTENDGVCPRKSNPSAIPIPVSILLRVKKLAEMQSQ 595
+ S Q + + G + ++ IP ILLRV++LAE QSQ
Sbjct: 591 KTSFAQSPSNSVGSLKKH---GSMHIPTQILLRVRELAEKQSQ 630
>AT1G17460.2 | chr1:5999519-6002546 FORWARD LENGTH=625
Length = 624
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 294/608 (48%), Gaps = 78/608 (12%)
Query: 27 PVVYQLVRVEGDGTLIPATEDEVLQFETFLHDEKVDDDLPSIDDVTHVEEYFTNDCIVKK 86
PV Y+LVRV GDG+L+PAT++E+L+ + L EK + D+P + D EEY ++ +
Sbjct: 33 PVTYKLVRVAGDGSLVPATDEEMLEVKNLL--EKNEQDMPVLPDPIQTEEYIPDEGSPSQ 90
Query: 87 -PEFEEGPSKLDTADVQTQKLDAGLEEDRLCTLNDSIVLPSNCSAVHDQQLDKLNTEQGA 145
+ E K +T ++ GL + + N ++ H+ + + +N Q
Sbjct: 91 FLQLENFEGKTYCIHAKTDRISLGLHDKGFFQSETAGPYTENLNSRHESKEELMNGSQML 150
Query: 146 NI-------IAQQDNASTETTKSTVLND----LSSDKEKADACSKPVNE-ASAGQSVSGV 193
+ I+ + + + E S VL SS+ + + +N AS +
Sbjct: 151 FVLPDTKFQISTELSGNVELVPSKVLLQEPILFSSNGCSINQSTDVLNATASPKEPALST 210
Query: 194 TSSVPDFSILKGEVCLDDLTMRELQEAFRATFGRQTTVKDKLWLKRRIAMGLINSCDVPS 253
+S PDFS + GE+ L +L+++ELQE FRATFGR+TT KDK WLKRRI MGLINSC VP+
Sbjct: 211 AASKPDFSRVPGEISLANLSIKELQETFRATFGRETTSKDKRWLKRRIKMGLINSCVVPT 270
Query: 254 SGCVVRDYKVIAMGAKQEIPVVEAIPKMELEANLVRDQVMNPGHERDLPSSLSYHSEEQQ 313
+ + D K+I G Q+ ++A K ++ + + P P + HS +
Sbjct: 271 TTLTINDSKLI--GGDQD--AIDAFSKGTVDEETATESIDTPAS----PDGIKGHSNDFG 322
Query: 314 RSSKRLKRVPTDNDEPQVTIFAEQGTTKRIRKPTKRYIEELSDIDTHESTGRLSSPGKRH 373
S D+ E G+ KR+RKPT+RYIEE ++ K+
Sbjct: 323 HSP---VETFVDHYSGNEDFEGEDGSAKRVRKPTRRYIEETNE--------------KQQ 365
Query: 374 VYDEVLLRPRIAPLHEVDSLSTAYPTREDTLGGCSVHVPYVSRMRRGRPRSNFIPFLD-P 432
+ ++ + + V S TR +L G + VPYVS +RR RPR N + +
Sbjct: 366 IDGSMIPSKDPSSIQAVSSEGRVVVTRMVSLAGSRIQVPYVSHVRRSRPRENIMALGEFR 425
Query: 433 EPSVECTEAPAADVVNLEKEGERKNHKNTGKKGVHVETSCEKDVQGLQDKD-----FCDS 487
S E AP +NL + N N GV + C VQ DKD F D
Sbjct: 426 SKSWEVKAAPEEGNLNLSPP-QLSNDVNR-VPGVKSASRC---VQKESDKDHLKPIFTDV 480
Query: 488 D---------------------DNPKTXXXXXXXXXXAWTLCEVVKLVDGVARYGAGKWS 526
D D P T AWT+ EV KLV+GV++YG GKW+
Sbjct: 481 DQEMMEPELLDSSGDSSDDNFVDAPITQSASGRKLHRAWTISEVEKLVEGVSKYGVGKWT 540
Query: 527 EIRRLAFSSYSYRTSVDLKDKWRNLIRASQTQLSTENDGVCPRKSNPSAIPIPVSILLRV 586
EI++L+FS Y++RT+VDLKDKWRNL +AS S +G + ++ IP I+L+V
Sbjct: 541 EIKKLSFSPYTHRTTVDLKDKWRNLQKASS---SNRMEGGLKKH---GSMAIPTHIMLQV 594
Query: 587 KKLAEMQS 594
++LA+ QS
Sbjct: 595 RELAQKQS 602
>AT2G37025.1 | chr2:15550042-15551957 FORWARD LENGTH=411
Length = 410
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 505 WTLCEVVKLVDGVARYGAGKWSEIRRLAFSSYSYRTSVDLKDKWRNLIRASQTQLSTEND 564
WTL EV+ LVDG++ +G GKW++I+ F ++R VD++DKWRNL++AS + ND
Sbjct: 295 WTLDEVMNLVDGISHFGVGKWTDIKNHFFHYAAHRKPVDIRDKWRNLLKASYNE--KHND 352
Query: 565 GVCPRKSNPSAIPIPVSILLRVKKLAEMQ 593
G K A IP IL RV++LA +
Sbjct: 353 GQAEEKRKSVARSIPKDILHRVRELASLH 381
>AT3G53790.1 | chr3:19928478-19930267 FORWARD LENGTH=355
Length = 354
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 505 WTLCEVVKLVDGVARYGAGKWSEIRRLAFSSYSYRTSVDLKDKWRNLIRASQ 556
+T+ EV LV V R G G+W +++ AF+ ++RT VDLKDKW+ L+ ++
Sbjct: 272 FTVSEVEALVQAVERLGTGRWRDVKSHAFNHVNHRTYVDLKDKWKTLVHTAK 323
>AT1G07540.1 | chr1:2318433-2321048 REVERSE LENGTH=631
Length = 630
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 505 WTLCEVVKLVDGVARYGAGKWSEIRRLAFSSYSYRTSVDLKDKWRNLIRASQTQLSTEND 564
+++ EV LV V R G G+W +++ AF + +RT VDLKDKW+ L+ ++
Sbjct: 531 FSVAEVEALVQAVERLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTAR-------- 582
Query: 565 GVCPRKSNPSAIPIPVSILLRV 586
+ P++ P+P +L RV
Sbjct: 583 -ISPQQRR--GEPVPQELLDRV 601
>AT3G46590.2 | chr3:17153642-17155946 FORWARD LENGTH=554
Length = 553
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 505 WTLCEVVKLVDGVARYGAGKWSEIRRLAFSSYSYRTSVDLKDKWRNLIRASQTQLSTEND 564
+++ EV LV V + G G+W +++ AF +RT VDLKDKW+ L+ ++
Sbjct: 456 FSVTEVEALVQAVEKLGTGRWRDVKVRAFEDADHRTYVDLKDKWKTLVHTAR-------- 507
Query: 565 GVCPRKSNPSAIPIPVSILLRVKKLAEMQSQ 595
+ P++ P+P +L RV K SQ
Sbjct: 508 -ISPQQRR--GEPVPQELLDRVLKAHAYWSQ 535
>AT5G59430.1 | chr5:23968254-23970695 FORWARD LENGTH=579
Length = 578
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 505 WTLCEVVKLVDGVARYGAGKWSEIRRLAFSSYSYRTSVDLKDKWRNLIRASQTQLSTEND 564
+++ EV LV V + G G+W +++ AF +RT VDLKDKW+ L+ ++
Sbjct: 471 FSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAK-------- 522
Query: 565 GVCPRKSNPSAIPIPVSILLRV 586
+ P++ P+P +L RV
Sbjct: 523 -ISPQQRR--GEPVPQELLNRV 541
>AT5G13820.1 | chr5:4461694-4464355 FORWARD LENGTH=641
Length = 640
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 488 DDNPKTXXXXXXXXXXAWTLCEVVKLVDGVARYGAGKWSEIRRLAFSSYSYRTSVDLKDK 547
++ PK +++ EV LV V G G+W +++ +F + S+RT VDLKDK
Sbjct: 521 NEKPKRTELSQRRTRRPFSVTEVEALVSAVEEVGTGRWRDVKLRSFENASHRTYVDLKDK 580
Query: 548 WRNLIRAS 555
W+ L+ +
Sbjct: 581 WKTLVHTA 588
>AT3G12560.1 | chr3:3982272-3984848 REVERSE LENGTH=620
Length = 619
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 491 PKTXXXXXXXXXXAWTLCEVVKLVDGVARYGAGKWSEIRRLAFSSYSYRTSVDLKDKWRN 550
PK +++ EV LV V G G+W +++ AF +RT VDLKDKW+
Sbjct: 498 PKRTELAQRRTRRPFSVTEVEALVQAVEELGTGRWRDVKLRAFEDADHRTYVDLKDKWKT 557
Query: 551 LIRASQTQLSTENDGVCPRKSNPSAIPIPVSILLRVKKLAEMQSQ 595
L+ + + P++ P+P +L RV + SQ
Sbjct: 558 LVHTAS---------ISPQQRR--GEPVPQELLDRVLRAYGYWSQ 591
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.131 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,391,748
Number of extensions: 592922
Number of successful extensions: 1466
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1463
Number of HSP's successfully gapped: 10
Length of query: 621
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 516
Effective length of database: 8,227,889
Effective search space: 4245590724
Effective search space used: 4245590724
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 115 (48.9 bits)