BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0775200 Os02g0775200|AK069984
(361 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77470.1 | chr1:29112194-29114323 REVERSE LENGTH=370 549 e-156
AT1G21690.3 | chr1:7615675-7618421 FORWARD LENGTH=342 208 3e-54
AT1G63160.1 | chr1:23422068-23423771 REVERSE LENGTH=334 207 9e-54
AT5G27740.1 | chr5:9823831-9826869 FORWARD LENGTH=355 129 3e-30
AT1G14460.1 | chr1:4948962-4952750 REVERSE LENGTH=1117 70 2e-12
AT1G24290.1 | chr1:8612650-8614227 REVERSE LENGTH=526 69 5e-12
AT2G02480.1 | chr2:661093-665337 FORWARD LENGTH=1219 69 5e-12
AT5G45720.1 | chr5:18543338-18546629 REVERSE LENGTH=967 67 1e-11
AT5G22010.1 | chr5:7280632-7287037 REVERSE LENGTH=957 62 7e-10
AT4G24790.1 | chr4:12778222-12781345 FORWARD LENGTH=858 60 2e-09
AT4G18820.1 | chr4:10330371-10334090 FORWARD LENGTH=1098 59 4e-09
AT1G04730.1 | chr1:1325385-1331086 REVERSE LENGTH=944 52 3e-07
>AT1G77470.1 | chr1:29112194-29114323 REVERSE LENGTH=370
Length = 369
Score = 549 bits (1414), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/336 (78%), Positives = 297/336 (88%), Gaps = 9/336 (2%)
Query: 33 PGGRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVA 92
P +A PWVEKYRPQSL DVAAHRDI+DTIDRLTNEN+LPHLLLYGPPGTGKTSTILAVA
Sbjct: 34 PQSKATPWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVA 93
Query: 93 RKLYGSQYGNMILELNASDERGIDVVRQQIQDFASARSLSFGAKQSVKMVLLDEADAMTK 152
RKLYG +Y NMILELNASD+RGIDVVRQQIQDFAS +S S G K SVK+VLLDEADAMTK
Sbjct: 94 RKLYGPKYRNMILELNASDDRGIDVVRQQIQDFASTQSFSLG-KSSVKLVLLDEADAMTK 152
Query: 153 DAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGTHVRERLKHIIQS 212
DAQFALRRVIEK+T+STRFALI NHVNKIIPALQSRCTRFRFAPLDG H+ +RLKH+I++
Sbjct: 153 DAQFALRRVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEA 212
Query: 213 EGLDVDDGGLTALVRLSNGDMRKALNILQSTHMA--------SKQITEEAVYLCTGNPMP 264
E L V D GL ALVRLSNGDMRKALNILQSTHMA SKQITEE VYLCTGNP+P
Sbjct: 213 ERLVVSDCGLAALVRLSNGDMRKALNILQSTHMASKEITEEESKQITEEDVYLCTGNPLP 272
Query: 265 KDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRIKLIND 324
KDIEQI++WLLN+ F +K +S++K RKGLA+VDI++E+T+F+FKI+MPS VR++LIND
Sbjct: 273 KDIEQISHWLLNKPFDECYKDVSEIKTRKGLAIVDIVKEITLFIFKIKMPSAVRVQLIND 332
Query: 325 LADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA 360
LADIEYRLSF CNDKLQLGA+ISTFT AR+ +V AA
Sbjct: 333 LADIEYRLSFGCNDKLQLGAIISTFTHARSIIVGAA 368
>AT1G21690.3 | chr1:7615675-7618421 FORWARD LENGTH=342
Length = 341
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 144/213 (67%), Gaps = 8/213 (3%)
Query: 37 AAPWVEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLY 96
+ PWVEKYRP+ + DVA ++V + PH+L YGPPGTGKT+T LA+A +L+
Sbjct: 8 SQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLF 67
Query: 97 GSQ-YGNMILELNASDERGIDVVRQQIQDFASARSLSFGAKQS------VKMVLLDEADA 149
G + Y + +LELNASD+RGI+VVR +I+DFA A ++ +QS K+++LDEAD+
Sbjct: 68 GPELYKSRVLELNASDDRGINVVRTKIKDFA-AVAVGSNHRQSGYPCPSFKIIILDEADS 126
Query: 150 MTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGTHVRERLKHI 209
MT+DAQ ALRR +E +++ TRF ICN++++II L SRC +FRF PL + R+ HI
Sbjct: 127 MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHI 186
Query: 210 IQSEGLDVDDGGLTALVRLSNGDMRKALNILQS 242
EGL +D L+ L +S GD+R+A+ LQS
Sbjct: 187 CNEEGLSLDGEALSTLSSISQGDLRRAITYLQS 219
>AT1G63160.1 | chr1:23422068-23423771 REVERSE LENGTH=334
Length = 333
Score = 207 bits (526), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 180/323 (55%), Gaps = 11/323 (3%)
Query: 35 GRAAPWVEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARK 94
G PWVEKYRP + D+ + D V + + + +P+L+L GPPGTGKT++ILA+A +
Sbjct: 12 GYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 71
Query: 95 LYGSQYGNMILELNASDERGIDVVRQQIQDFASAR-SLSFGAKQSVKMVLLDEADAMTKD 153
L G+ Y +LELNASD+RGIDVVR +I+ FA + +L G K+V+LDEAD+MT
Sbjct: 72 LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRH---KVVILDEADSMTSG 128
Query: 154 AQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGTHVRERLKHIIQSE 213
AQ ALRR IE ++ STRFAL CN KII +QSRC RF+ L + RL ++ +E
Sbjct: 129 AQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAE 188
Query: 214 GLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQITEEAVYLCTGNPMPKDIEQIAYW 273
+ GL A++ ++GDMR+ALN LQ+T + +E V+ P P ++ I
Sbjct: 189 KVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHVKNIVRN 248
Query: 274 LLNESFSTS---FKCISDMKMRKGLALVDIIREVTMFVFKIQMPSDVRIKLINDLADIEY 330
+L F + K + D+ G + DII + + M ++++ + +
Sbjct: 249 VLESKFDIACDGLKQLYDL----GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHM 304
Query: 331 RLSFACNDKLQLGALISTFTGAR 353
R+ LQL L++ + R
Sbjct: 305 RICDGVGSYLQLCGLLAKLSIVR 327
>AT5G27740.1 | chr5:9823831-9826869 FORWARD LENGTH=355
Length = 354
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 39/261 (14%)
Query: 40 WVEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQ 99
WV+KYRP+SL V H DI + +L +E PHLL YGP G+GK + I+A+ +++YG+
Sbjct: 3 WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGAS 62
Query: 100 YGNMILELNA----SDERGID-------------------------VVRQQIQDFASARS 130
+ +E A + R ID +V++ I++ A R
Sbjct: 63 AEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRP 122
Query: 131 LSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCT 190
+ K+ K+++L+E D ++++AQ +LRR +EK++ S R L CN +K+ A++SRC
Sbjct: 123 IDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCL 182
Query: 191 RFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQI 250
R + + L+ + + E L + G + SN +R+A+ L++ + +
Sbjct: 183 NVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQN--- 239
Query: 251 TEEAVYLCTGNPM--PKDIEQ 269
Y TGN + P D E+
Sbjct: 240 -----YPFTGNQVISPMDWEE 255
>AT1G14460.1 | chr1:4948962-4952750 REVERSE LENGTH=1117
Length = 1116
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 42 EKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLY-GPPGTGKTST--ILAVARKL--- 95
+KY+P ++ +V ++ + R+ H+ L+ GP GTGKTST IL+ A
Sbjct: 426 QKYKPMFFDELIGQSIVVQSLMNAVKKGRVAHVYLFQGPRGTGKTSTARILSAALNCDVV 485
Query: 96 --------YGSQYGNM-------ILELNASDERGIDVVRQQIQDFASARSLSFGAKQSVK 140
Y + + +LEL+A + G + VR ++ + L+ + Q K
Sbjct: 486 TEEMKPCGYCKECSDYMLGKSRDLLELDAGKKNGAEKVRYLLKKLLT---LAPQSSQRYK 542
Query: 141 MVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGT 200
+ ++DE + +L + +E + F I ++ + +QSRC ++ F +
Sbjct: 543 VFVIDECHLLPSRTWLSLLKFLENPLQKFVFVCITTDLDNVPRTIQSRCQKYIFNKVRDG 602
Query: 201 HVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQITEEAV 255
+ RL+ I E LDV+ L + ++G +R A +L+ + K+IT + V
Sbjct: 603 DIVVRLRKIASDENLDVESQALDLIALNADGSLRDAETMLEQLSLMGKRITVDLV 657
>AT1G24290.1 | chr1:8612650-8614227 REVERSE LENGTH=526
Length = 525
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 24/241 (9%)
Query: 29 LSSTPGGRAAPWVEKYRPQSLGDVAA--HRDIVDTIDRLTNE-NRLPHLLLYGPPGTGKT 85
LSS+ + P E+ RP++L DV H ++ R E NRLP ++ +GPPGTGKT
Sbjct: 92 LSSSSHRQHQPLSERMRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPGTGKT 151
Query: 86 STILAVARKLYGSQYGNMI---LELNASDERGIDVVRQQIQDFASARSLSF-GAKQSVKM 141
S +A+ L S + + L+A G+ VR ++ SA+ L+ G K++V
Sbjct: 152 S----IAKSLINSSKDPSLYRFVSLSAVTS-GVKDVRDAVE---SAKRLNLEGRKRTV-- 201
Query: 142 VLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGTH 201
+ +DE K Q VIE + A N +I L SRC PL H
Sbjct: 202 LFMDEVHRFNKSQQDTFLPVIEDGSILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNH 261
Query: 202 VRERLKHIIQ------SEGLDVDDGGLTALVRLSNGDMRKALNILQ-STHMASKQITEEA 254
V L+ + ++VDD + L +GD R ALN L+ S MA+ + +A
Sbjct: 262 VETLLRRAVDDSERGLPNSVEVDDSVIEFLANNCDGDARVALNALEISATMATTRAGTDA 321
Query: 255 V 255
V
Sbjct: 322 V 322
>AT2G02480.1 | chr2:661093-665337 FORWARD LENGTH=1219
Length = 1218
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 27/232 (11%)
Query: 42 EKYRPQSLGDVAAHRDIVDTIDRLTNENRL-PHLLLYGPPGTGKTSTILAVARKL----- 95
+KYRP ++ +V ++ +R+ P L GP GTGKTST + L
Sbjct: 453 QKYRPMFFEELIGQSIVVQSLMNAVKRSRIAPVYLFQGPRGTGKTSTARIFSAALNCVAT 512
Query: 96 --------------YGSQYGNMILELNASDERGIDVVRQQIQDFAS--ARSLSFGAKQSV 139
+ S EL+ ++++G D VR +++ + R+ S
Sbjct: 513 EEMKPCGYCKECNDFMSGKSKDFWELDGANKKGADKVRYLLKNLPTILPRNSSM-----Y 567
Query: 140 KMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDG 199
K+ ++DE + + + +E + F I + + +QSRC +F F L
Sbjct: 568 KVFVIDECHLLPSKTWLSFLKFLENPLQKVVFIFITTDLENVPRTIQSRCQKFLFDKLKD 627
Query: 200 THVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQIT 251
+ + RLK I E LDVD L + ++G +R A +L+ + K+IT
Sbjct: 628 SDIVVRLKKIASDENLDVDLHALDLIAMNADGSLRDAETMLEQLSLLGKRIT 679
>AT5G45720.1 | chr5:18543338-18546629 REVERSE LENGTH=967
Length = 966
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 40 WVEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHL-LLYGPPGTGKTSTILAVARKLY-G 97
+ +KY P++ D+ +V + + R+ L + +GP GTGKTS AR L
Sbjct: 345 FTQKYAPRTFRDLLGQNLVVQALSNAIAKRRVGLLYVFHGPNGTGKTSCARVFARALNCH 404
Query: 98 SQYGNMILELNASDERGIDVVRQQIQDFASARSLSFG---------AKQSVKMVLL-DEA 147
S + + +S D + I++ +S F +Q ++VL+ D+
Sbjct: 405 STEQSKPCGVCSSCVSYDDGKNRYIREMGPVKSFDFENLLDKTNIRQQQKQQLVLIFDDC 464
Query: 148 DAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGTHVRERLK 207
D M+ D L +++++ R F L+C+ ++ + + SRC +F F L + + L+
Sbjct: 465 DTMSTDCWNTLSKIVDRAPRRVVFVLVCSSLDVLPHIIVSRCQKFFFPKLKDVDIIDSLQ 524
Query: 208 HIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQIT 251
I E +D+D L + S+G +R A L+ + +I+
Sbjct: 525 LIASKEEIDIDKDALKLVASRSDGSLRDAEMTLEQLSLLGTRIS 568
>AT5G22010.1 | chr5:7280632-7287037 REVERSE LENGTH=957
Length = 956
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 42/239 (17%)
Query: 39 PWVEKYRPQSLGDVAAHRDIVDTIDR--------------------LTNENRLPHLLLYG 78
PW EKYRP+ ++ ++ +V + L + +LL G
Sbjct: 341 PWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKAVLLSG 400
Query: 79 PPGTGKTSTILAVARKLYGSQYGNMILELNASDERG--------------IDVVRQQIQD 124
PG GKT++ KL G +E+NASD RG + V++ + +
Sbjct: 401 TPGIGKTTSA-----KLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANSVKELVNN 455
Query: 125 FASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVI--EKHTRSTRFALICNHVNKII 182
A A + +K ++++DE D M+ + + +I K ++ + + ++ +
Sbjct: 456 EAMAANFDR-SKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKL 514
Query: 183 PALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQ 241
+L + C + + +RL HI ++EGL++++ L L NGD+R A+N LQ
Sbjct: 515 KSLVNYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQ 573
>AT4G24790.1 | chr4:12778222-12781345 FORWARD LENGTH=858
Length = 857
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 26/236 (11%)
Query: 42 EKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHL-LLYGPPGTGKTST--ILAVAR----- 93
+K+RP+S ++ +V + R+ + L +GP GTGKTST I A A
Sbjct: 243 QKFRPKSFDELVGQEVVVKCLLSTILRGRITSVYLFHGPRGTGKTSTSKIFAAALNCLSQ 302
Query: 94 -------------KLYGSQYGNMILELNASDERGIDVVRQQIQDFASARSLSFGAKQSVK 140
K Y S G ++E ++ +R I+ AS +S K
Sbjct: 303 AAHSRPCGLCSECKSYFSGRGRDVMETDSGKLNRPSYLRSLIKS-ASLPPVS----SRFK 357
Query: 141 MVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIPALQSRCTRFRFAPLDGT 200
+ ++DE + ++ L ++ ++ + F L+ + + K+ + SR ++ F+ +
Sbjct: 358 VFIIDECQLLCQETWGTLLNSLDNFSQHSVFILVTSELEKLPRNVLSRSQKYHFSKVCDA 417
Query: 201 HVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQITEEAVY 256
+ +L I EG+D D G + + S+G +R A +L + K+IT Y
Sbjct: 418 DISTKLAKICIEEGIDFDQGAVDFIASKSDGSLRDAEIMLDQLSLLGKRITTSLAY 473
>AT4G18820.1 | chr4:10330371-10334090 FORWARD LENGTH=1098
Length = 1097
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 19/228 (8%)
Query: 41 VEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHL-LLYGPPGTGKTSTILAVARKLY--- 96
EKY P++ D+ +V + +L L + +GP GTGKTS AR L
Sbjct: 434 TEKYTPKTFRDLLGQNLVVQALSNAVARRKLGLLYVFHGPNGTGKTSCARIFARALNCHS 493
Query: 97 -------GSQYGNMILELNAS-DERGIDVVRQQIQDFASARSLSFG----AKQSVKMVLL 144
G+ + ++ S + R + V DF L G + QS ++ +
Sbjct: 494 MEQPKPCGTCSSCVSHDMGKSWNIREVGPVGNY--DFEKIMDLLDGNVMVSSQSPRVFIF 551
Query: 145 DEADAMTKDAQFALRRVIEKHT-RSTRFALICNHVNKIIPALQSRCTRFRFAPLDGTHVR 203
D+ D ++ D AL +V+++ R F L+C+ ++ + + SRC +F F L +
Sbjct: 552 DDCDTLSSDCWNALSKVVDRAAPRHVVFILVCSSLDVLPHVIISRCQKFFFPKLKDADIV 611
Query: 204 ERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQSTHMASKQIT 251
L+ I E +++D L + S+G +R A L+ + ++I+
Sbjct: 612 YSLQWIASKEEIEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRIS 659
>AT1G04730.1 | chr1:1325385-1331086 REVERSE LENGTH=944
Length = 943
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 39/215 (18%)
Query: 57 DIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGID 116
D+ + +LT LLL G PG GKT T+ +A K G ++E+NASDER
Sbjct: 323 DLWNKKSKLTGPPEQKILLLCGAPGLGKT-TLAHIAAK----HCGYRVVEINASDERSAS 377
Query: 117 VVRQQIQDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIE------KHT---- 166
+ +I D S++ A K +++DE D D + A+ +++ KH
Sbjct: 378 AIETRILDVVQMNSVT--ADSRPKCLVIDEIDGALGDGKGAVDVILKMVLAERKHATGKE 435
Query: 167 ----------RSTRFA-------LICNHVNKIIPALQS--RCTRFR-FAPLDGTHVRERL 206
+ R A ICN + PAL+ + + F + V RL
Sbjct: 436 NVENVKTSSKKDRRTAPLSRPVICICNDL--YAPALRPLRQIAKVHIFVQPTVSRVVNRL 493
Query: 207 KHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQ 241
K+I EG+ L+AL + D+R LN LQ
Sbjct: 494 KYICNMEGMKARSFALSALAEYTECDIRSCLNTLQ 528
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.135 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,584,839
Number of extensions: 253720
Number of successful extensions: 933
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 925
Number of HSP's successfully gapped: 13
Length of query: 361
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 261
Effective length of database: 8,364,969
Effective search space: 2183256909
Effective search space used: 2183256909
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)