BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0758100 Os02g0758100|AK068256
         (734 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65290.1  | chr5:26089814-26094337 FORWARD LENGTH=734          947   0.0  

>AT5G65290.1 | chr5:26089814-26094337 FORWARD LENGTH=734
          Length = 733

 Score =  947 bits (2449), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/727 (65%), Positives = 568/727 (78%), Gaps = 29/727 (3%)

Query: 1   MWVFYLISLPLTLGMVTVTLRYFAGPGVPRYVIATVGYAWFCSLSFIILVPADIWTTLTG 60
           MWVFYLISLPLTLG+V  TLRYFAGP +PRYV+ TVGY WFCS+S IIL PADIWTTL+ 
Sbjct: 1   MWVFYLISLPLTLGLVVFTLRYFAGPEIPRYVLITVGYTWFCSVSVIILAPADIWTTLSL 60

Query: 61  R----EKGGIGFFWSWSYWSTFILTWAVVPTIQGYEDAGDFTVKERLKTSIHMNLLFYSX 116
           +    E G I F WSWSYWSTF+LTWAVVP IQG+EDAGDFTV ERLKTS+H+NL+FY  
Sbjct: 61  QPDHPENGAISFLWSWSYWSTFLLTWAVVPLIQGFEDAGDFTVSERLKTSVHVNLVFYLV 120

Query: 117 XXXXXXXXXXXXXVMHRAWDGGIVGFAMACSNTFGLVTGAFLLGFGLSEIPRNIWKNADW 176
                        +MHR W G I+G+AMACSNTFGLVTGAFLLGFGLSEIP+ +WKNADW
Sbjct: 121 LGFIGLLGLILLIMMHRNWTGSILGYAMACSNTFGLVTGAFLLGFGLSEIPKTLWKNADW 180

Query: 177 THRQKVLSHRVAKMAVKLDNAHQEYSNAIVVAQATSNQMSKRDLLRPYMDIIDKMLAQML 236
           T RQKVLSH++AK+AVKLDNAHQE SNAIVVAQATS QMSKRD +RPYM++ID MLA+M 
Sbjct: 181 TTRQKVLSHKIAKIAVKLDNAHQELSNAIVVAQATSTQMSKRDPMRPYMNVIDAMLAKMF 240

Query: 237 REDPSFKPSGGRLGENDMDYDTDDKTMATLRRQLRRAHEEYYRCKSEYMTYVMEALELED 296
           REDPSFKP GG+LGENDMDYDTD+K+MATLRR LR A +EYYR KSEY+TYV EAL LED
Sbjct: 241 REDPSFKPQGGQLGENDMDYDTDEKSMATLRRHLRNAKDEYYRYKSEYLTYVTEALVLED 300

Query: 297 TIKNYERRDANGWKFVSSFRESRPGTLGSLLDTMEFIWRCVLRKQLQKGFAIVLGCMSAA 356
           T+KNYERRDA GWK++SSFR +R G +G+LLD++EF+WRC+L+KQ+Q   A+V+G MSAA
Sbjct: 301 TMKNYERRDATGWKYISSFRATRTGKMGNLLDSLEFMWRCILKKQIQMVLAVVMGIMSAA 360

Query: 357 ILLAEATLLPSGVDLSLFSILVKSVGKQEVLVQVAAFVPLMYMCICTYYSLFQIGMLMFY 416
           ILLAEATLL S +DLSLFSIL+ SV   E+LVQ  AFVPL+YMC+CTYYSLF+IGMLM Y
Sbjct: 361 ILLAEATLLLSKLDLSLFSILISSVKSDELLVQAFAFVPLVYMCVCTYYSLFKIGMLMIY 420

Query: 417 SLTPRQTSSVSLLMICSMVARYAPPISYNFLNLIRLGGDAKTTFEKRMGNIDDAVPFFGR 476
           SLTPRQTSSV+LLMICSM+ARYAPPISYNF+NLI+L   ++T FEK+MG IDDAVP FG+
Sbjct: 421 SLTPRQTSSVNLLMICSMIARYAPPISYNFINLIQL--HSETIFEKKMGRIDDAVPVFGQ 478

Query: 477 GFNRIYPLFMVVYTLLVASNFFGRLINFFGSWKRFKFQREEENMDGFDPSGMIILQKERS 536
            FN IYPL MV+YTLLVASNFF R+ N+FGSWKRF+FQ E E+ DGFDPSG++IL+KER+
Sbjct: 479 RFNEIYPLIMVIYTLLVASNFFDRIFNYFGSWKRFRFQTETEDTDGFDPSGLMILKKERT 538

Query: 537 WIEQGCKVGEQVIPLARNFNNVNTDVESGKVPLVENTLEMKSGATSSRADGRVGQS---- 592
           W+E+G KVGE V+PLARNFN+V  D+E G      +++EMK  ++S   D   G S    
Sbjct: 539 WLEEGQKVGEHVLPLARNFNDV--DIEPGSNFSENSSVEMKM-SSSYDIDTLKGSSSKDD 595

Query: 593 ---KYANNRETIATKYSAIREQSRQA-----VKPAKKEISSTSVSLLEEGSSEQWSNTGA 644
              KY + RE I  KY+AIREQ  +       KP  + ++S  VSLLE  +S   +  G+
Sbjct: 596 MSRKYGSAREAITNKYAAIREQQNKHSPSSMTKP--ENMASAKVSLLETDNSGPSNGQGS 653

Query: 645 PVGSSAGISQTWATMKIGFQNFKANMGSKKFIPLRQDPGFAPHSNV-----SSPESLDEI 699
              SS  ++ TW  MK+G Q+FK N+ +KKF+PLRQ P     ++      S P+SLDEI
Sbjct: 654 GEPSSR-LASTWRNMKLGIQSFKENVATKKFLPLRQSPETTALTSTRVVTSSVPQSLDEI 712

Query: 700 FQKLKRR 706
           FQ+LK R
Sbjct: 713 FQRLKNR 719



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.136    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,337,488
Number of extensions: 638048
Number of successful extensions: 1560
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1554
Number of HSP's successfully gapped: 1
Length of query: 734
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 628
Effective length of database: 8,200,473
Effective search space: 5149897044
Effective search space used: 5149897044
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 115 (48.9 bits)