BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0756600 Os02g0756600|AK062900
(313 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G08950.1 | chr4:5740378-5741322 FORWARD LENGTH=315 306 1e-83
AT5G64260.1 | chr5:25703980-25704897 FORWARD LENGTH=306 285 2e-77
AT1G35140.1 | chr1:12852089-12853018 FORWARD LENGTH=310 272 2e-73
AT5G09440.1 | chr5:2938397-2939233 FORWARD LENGTH=279 245 2e-65
AT3G02970.1 | chr3:669217-670495 REVERSE LENGTH=333 139 2e-33
AT2G17230.1 | chr2:7494892-7495983 REVERSE LENGTH=364 128 4e-30
AT5G51550.1 | chr5:20939793-20940806 REVERSE LENGTH=338 127 9e-30
AT2G35150.1 | chr2:14817220-14818191 REVERSE LENGTH=324 114 7e-26
>AT4G08950.1 | chr4:5740378-5741322 FORWARD LENGTH=315
Length = 314
Score = 306 bits (783), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/305 (50%), Positives = 200/305 (65%), Gaps = 15/305 (4%)
Query: 18 QVSMGARRRMELYKPDPADMLSYHSGAVLQGNIPVSIYWYGKFTPAQKSILFDFXXXXXX 77
Q+S+ AR + +P+ +L YH GA+L G I V++ WYGKF P+Q++I+ DF
Sbjct: 16 QISVSARN-LASQEPNQFQLLKYHKGALLSGKISVNLIWYGKFKPSQRAIISDFITSLTH 74
Query: 78 XXXXXXX----XXXQWWSSIDELYLSKAVQTNSNGQSKKTQVLVASQVSDINCSMGKSLT 133
WW + ++ Y NS+ S + + Q+ D +CS+GKSLT
Sbjct: 75 TSPTSKTLHQPSVATWWKTTEKYYKLATPSKNSSPLS----LTLGKQIIDESCSLGKSLT 130
Query: 134 XXXXXXXXXXXKPKKGGIALVFTAQDVTVEGFGMSRCGLHGSD---AKSGT--AYIWVGN 188
++ I +V T+ DVTV GFGMSRCG HG K G+ AYIWVGN
Sbjct: 131 DKKIQTLASKGD-QRNAINVVLTSADVTVTGFGMSRCGTHGHARGLGKRGSKFAYIWVGN 189
Query: 189 PATQCPGECAWPFHQPMYGPQGAPLVAPNGDIGADGMVMNLASMLAGTVTNPFGDGYYQG 248
TQCPG+CAWPFH P+YGPQ PLVAPN D+G DGMV+NLAS+LAGT TNPFG+GYYQG
Sbjct: 190 SETQCPGQCAWPFHAPVYGPQSPPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQG 249
Query: 249 SRDAPLEAATACPGVFGSGAYPGFAGELKVDQATGASYNANGANGRKYLLPALYNPSTGT 308
++APLEAA+ACPGV+G GAYPG+AG+L VD TG S+NA GANGRK+LLPALY+P+T
Sbjct: 250 PQNAPLEAASACPGVYGKGAYPGYAGDLLVDTTTGGSFNAYGANGRKFLLPALYDPTTSA 309
Query: 309 CNTLV 313
C+T+V
Sbjct: 310 CSTMV 314
>AT5G64260.1 | chr5:25703980-25704897 FORWARD LENGTH=306
Length = 305
Score = 285 bits (730), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 181/286 (63%), Gaps = 21/286 (7%)
Query: 37 MLSYHSGAVLQGNIPVSIYWYGKFTPAQKSILFDFXXXXXXXXXXXXXXX---XQWWSSI 93
++ YH+G +L+GNI V++ WYGKFTP Q+S++ DF WW +
Sbjct: 32 VMKYHNGVLLKGNITVNLVWYGKFTPIQRSVIVDFIHSLNSKDVASSAAVPSVASWWKTT 91
Query: 94 DELYLSKAVQTNSNGQSKKTQVLVASQVSDINCSMGKSLTXXXXXXXXXXXKPKKGGIAL 153
++ + + ++V Q+ N +GKSL I +
Sbjct: 92 EKY------------KGGSSTLVVGKQLLLENYPLGKSLKNPYLRALSTKLNGGLRSITV 139
Query: 154 VFTAQDVTVEGFGMSRCGLHGSD------AKSGTAYIWVGNPATQCPGECAWPFHQPMYG 207
V TA+DVTVE F MSRCG HGS A +G AY+WVGN TQCPG CAWPFHQP+YG
Sbjct: 140 VLTAKDVTVERFCMSRCGTHGSSGSNPRRAANGAAYVWVGNSETQCPGYCAWPFHQPIYG 199
Query: 208 PQGAPLVAPNGDIGADGMVMNLASMLAGTVTNPFGDGYYQGSRDAPLEAATACPGVFGSG 267
PQ PLVAPNGD+G DGM++NLA++LA TVTNPF +GYYQG APLEA +ACPG+FGSG
Sbjct: 200 PQTPPLVAPNGDVGVDGMIINLATLLANTVTNPFNNGYYQGPPTAPLEAVSACPGIFGSG 259
Query: 268 AYPGFAGELKVDQATGASYNANGANGRKYLLPALYNPSTGTCNTLV 313
+YPG+AG + VD+ TG+SYNA G GRKYLLPA+++P + TC TLV
Sbjct: 260 SYPGYAGRVLVDKTTGSSYNARGLAGRKYLLPAMWDPQSSTCKTLV 305
>AT1G35140.1 | chr1:12852089-12853018 FORWARD LENGTH=310
Length = 309
Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/287 (49%), Positives = 184/287 (64%), Gaps = 22/287 (7%)
Query: 38 LSYHSGAVLQGNIPVSIYWYGKFTPAQKSILFDFXXXXXXXXXXXXX---XXXQWWSSID 94
YH GA+L G++ +++ WYGKF P+Q++I+ DF WW +++
Sbjct: 32 FQYHKGALLTGDVSINLIWYGKFKPSQRAIVTDFVASLSSSRRSTMAQNPSVATWWKTVE 91
Query: 95 ELYLSKAVQTNSNGQSKKTQVLVASQVSDINCSMGKSLTXXXXXXXXXXXKPKKGG---- 150
+ Y + + T ++ + + Q+ D SMGKSLT KGG
Sbjct: 92 KYYQFRKMTT-----TRGLSLSLGEQILDQGYSMGKSLTEKNLKDLAA-----KGGQSYA 141
Query: 151 IALVFTAQDVTVEGFGMSRCGLHGSDAKSGT-----AYIWVGNPATQCPGECAWPFHQPM 205
+ +V T+ DVTV+GF M+RCG HG+ + SG AYIWVGN TQCPG+CAWPFH P+
Sbjct: 142 VNVVLTSADVTVQGFCMNRCGSHGTGSGSGKKGSRFAYIWVGNSETQCPGQCAWPFHAPV 201
Query: 206 YGPQGAPLVAPNGDIGADGMVMNLASMLAGTVTNPFGDGYYQGSRDAPLEAATACPGVFG 265
YGPQ PLVAPN D+G DGMV+NLAS++A T TNPFGDGYYQG + APLEA +AC GV+G
Sbjct: 202 YGPQSPPLVAPNNDVGLDGMVINLASLMAATATNPFGDGYYQGPKTAPLEAGSACTGVYG 261
Query: 266 SGAYPGFAGELKVDQATGASYNANGANGRKYLLPALYNPSTGTCNTL 312
G+YPG+AGEL VD TG SYN G NGRKYLLPAL++P T +C+TL
Sbjct: 262 KGSYPGYAGELLVDATTGGSYNVKGLNGRKYLLPALFDPKTDSCSTL 308
>AT5G09440.1 | chr5:2938397-2939233 FORWARD LENGTH=279
Length = 278
Score = 245 bits (626), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 165/273 (60%), Gaps = 31/273 (11%)
Query: 46 LQGNIPVSIYWYGKFTPAQKSILFDFXXXXXXXXXXXXXXXXQWWSSIDELYLSKAVQTN 105
L GNI +++ WYGKFTP Q+SI+ DF WW +T
Sbjct: 32 LNGNITLNLIWYGKFTPIQRSIIVDFIRSISSVTAAKGPSVASWW------------KTT 79
Query: 106 SNGQSKKTQVLVASQVSDINCSMGKSLTXXXXXXXXXXXKPKKGG---IALVFTAQDVTV 162
++ + ++V Q+ N +GKSL K GG I +V TA+DVTV
Sbjct: 80 EKYKTGVSTLVVGKQLLLENYPLGKSL--KSPYLRALSSKLNAGGARSITVVLTAKDVTV 137
Query: 163 EGFGMSRCGLHGSDAKSGT--AYIWVGNPATQCPGECAWPFHQPMYGPQGAPLVAPNGDI 220
EG M+RCG HGS + S AY+WVGN TQCPG CAWPFHQP+YGPQ PLVAPNGD+
Sbjct: 138 EGLCMNRCGTHGSKSSSVNSGAYVWVGNSETQCPGYCAWPFHQPIYGPQSPPLVAPNGDV 197
Query: 221 GADGMVMNLASMLAGTVTNPFGDGYYQGSRDAPLEAATACPGVFGSGAYPGFAGELKVDQ 280
G DGM++N+A++L TVTNP +P EA +AC G+FGSGAYPG+AG + VD+
Sbjct: 198 GVDGMIINIATLLVNTVTNP-----------SP-EAVSACTGIFGSGAYPGYAGRVLVDK 245
Query: 281 ATGASYNANGANGRKYLLPALYNPSTGTCNTLV 313
+GASYNA G GRKYLLPAL++P T TC T+V
Sbjct: 246 TSGASYNALGLAGRKYLLPALWDPQTSTCKTMV 278
>AT3G02970.1 | chr3:669217-670495 REVERSE LENGTH=333
Length = 332
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 135/295 (45%), Gaps = 32/295 (10%)
Query: 48 GNIPVSIYWYGKFTPAQKSILFDFXXXXXXXXXX-XXXXXXQWWSSID---ELYLSKAV- 102
G + +S+ WYG+FTP QK + DF WW ++ E + K +
Sbjct: 37 GTLDLSLLWYGQFTPTQKERVHDFIESLNFDAKEGLDPKVSAWWKVVESYQERFEVKDIY 96
Query: 103 -QTNSNGQ-SKKTQVLVASQVSDINCSMGKSLTXXXXXXXXXXXKPKKGGIA-LVFTAQD 159
Q SN + + +V V D GK LT + +V +
Sbjct: 97 RQKKSNRTVAPRIKVKVVRSYVDEKMKYGKELTMGNGEKLVETAIGNMSKVVPVVLLSAQ 156
Query: 160 VTVEGFGMS--RCGLHGSDAK-----SGTAYIWVGNPATQCPGECAWPFHQPMYGPQGAP 212
V G G C H + AK YI V NP +CPGECAWPFH GP+G
Sbjct: 157 VRAHGVGFCDGTCQ-HNALAKIKGQKEPRRYIMVSNPEVECPGECAWPFHTADKGPRGMT 215
Query: 213 LVAPNGDIGADGMVMNLASMLAGTVTN-------------PFGDGYYQGSRDAPL---EA 256
+G++GAD +V+ LA+ LA TN P+ D + + + +
Sbjct: 216 YQPASGEVGADALVIQLATGLADLATNPDLTKSLFKSETTPYNDDVKKNHESSSMYIVDP 275
Query: 257 ATACPGVFGSGAYPGFAGELKVDQATGASYNANGANGRKYLLPALYNPSTGTCNT 311
AT C VFGSGA+PGF G ++VD TG ++N++G N K+L+P++++P T +C T
Sbjct: 276 ATKCTRVFGSGAFPGFTGRIRVDPITGGAFNSHGINHLKFLIPSIWDPKTKSCWT 330
>AT2G17230.1 | chr2:7494892-7495983 REVERSE LENGTH=364
Length = 363
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 138/289 (47%), Gaps = 26/289 (8%)
Query: 38 LSYHSGAVLQGNIPVSIY--WYGKFTPAQKSILFDFXXXXXXXXXXXXXXXXQWWSSIDE 95
L YH G VL + P++IY WYG+++ KS++ DF S+ E
Sbjct: 79 LRYHMGPVLSSS-PINIYVIWYGQWSRPHKSLIRDFLNSISDAKAPS--------PSVSE 129
Query: 96 LYLSKAVQTNSNGQSKKTQVLVASQVSDINCSMGKSLTXXXXXXXXXXXK-------PKK 148
+ + ++ T+ G + VL+A + SD S G+ LT K
Sbjct: 130 WWRTASLYTDQTGSNVSRSVLIAGEYSDSKYSHGQHLTRLTIQEVIASAARSASFPVDHK 189
Query: 149 GGIALVFTAQDVTVEGFGMSRCGLHGSDAKSGTAYI----WVGNPATQCPGECAWPFHQP 204
G+ LV T+ DVT++ F + CG H S Y WVG QCP CA+PF P
Sbjct: 190 NGMYLVLTSHDVTMQDFCRAVCGFHYFTFPSMVGYTMPYAWVGQSGKQCPEVCAYPFALP 249
Query: 205 MYGPQGAP--LVAPNGDIGADGMVMNLASMLAGTVTNPFGDGYYQGSR-DAPLEAATACP 261
Y G P L PNG+ G DGMV + LA V+NP + +Y G AP E C
Sbjct: 250 GYMGHGGPGELRPPNGETGVDGMVSVIGHELAEVVSNPLINAWYAGEDPTAPTEIGDLCE 309
Query: 262 GVFGSGAYPGFAGELKVDQATGASYNANGANGRKYLLPALYNPSTGTCN 310
G++GSG G+ G++ D+ G ++N NG GRK+L+ ++NP+ C+
Sbjct: 310 GLYGSGGGGGYIGQVMRDRE-GKTFNMNGKGGRKFLVQWIWNPNLKACS 357
>AT5G51550.1 | chr5:20939793-20940806 REVERSE LENGTH=338
Length = 337
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 135/286 (47%), Gaps = 24/286 (8%)
Query: 38 LSYHSGAVLQGNIPVSIYWYGKFTPAQKSILFDFXXXXXXXXXXXXXXXXQWWSSIDELY 97
L YH G VL NI V WYG + +QK I+ +F WW ++ +LY
Sbjct: 55 LRYHMGPVLTNNITVHPIWYGTWQKSQKKIIREFINSISAVGSKHPSVSG-WWKTV-QLY 112
Query: 98 LSKAVQTNSNGQSKKTQVLVASQVSDINCSMGKSLT-----XXXXXXXXXXXKP----KK 148
T+ G + V + + +D S GKSLT +P K
Sbjct: 113 ------TDQTGSNITGTVRLGEEKNDRFYSHGKSLTRLSIQSVIKSAVTSRSRPLPVNPK 166
Query: 149 GGIALVFTAQDVTVEGFGMSRCGLH----GSDAKSGTAYIWVGNPATQCPGECAWPFHQP 204
G+ L+ TA DV V+ F CG H S Y WVGN A CPG CA+PF P
Sbjct: 167 SGLYLLLTADDVYVQDFCGQVCGFHYFTFPSIVGFTLPYAWVGNSAKLCPGVCAYPFAVP 226
Query: 205 MYGPQGAPLVAPNGDIGADGMVMNLASMLAGTVTNPFGDGYYQGSRD-APLEAATACPGV 263
+ P P+ +PNGD+G DGM+ +A +A TNP + +Y G AP+E A C G+
Sbjct: 227 AFIPGLKPVKSPNGDVGVDGMISVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGI 286
Query: 264 FGSGAYPGFAGELKVDQATGASYNANGANGRKYLLPALYNPSTGTC 309
+G+G + G++ D + GA+YN NG R+YL+ L++ C
Sbjct: 287 YGTGGGGSYTGQMLNDHS-GATYNVNGIR-RRYLIQWLWSHVVSYC 330
>AT2G35150.1 | chr2:14817220-14818191 REVERSE LENGTH=324
Length = 323
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 132/291 (45%), Gaps = 29/291 (9%)
Query: 38 LSYHSGAVLQGNI-PVSIYWYGKFTPAQKSILFDFXXXXXXXXXXXXXXXXQWWSSIDEL 96
L YH G V+ + + I WYG++ P +SI+ DF WW ++ L
Sbjct: 36 LQYHLGPVISSPVTSLYIIWYGRWNPTHQSIIRDFLYSVSAPAPAQYPSVSNWWKTV-RL 94
Query: 97 YLSKAVQTNSNGQSKKTQVLVAS-QVSDINCSMGKSLTXXXXXXXXXXXKPKK------G 149
Y QT SN T LV S + D S G LT K
Sbjct: 95 YRD---QTGSN----ITDTLVLSGEFHDSTYSHGSHLTRFSVQSVIRTALTSKLPLNAVN 147
Query: 150 GIALVFTAQDVTVEGFGMSRCGLH----GSDAKSGTAYIWVGNPATQCPGECAWPFHQPM 205
G+ LV T+ DV ++ F + CG H S + Y WVGN QCP CA+PF QP
Sbjct: 148 GLYLVLTSDDVEMQEFCRAICGFHYFTFPSVVGATVPYAWVGNSERQCPEMCAYPFAQPK 207
Query: 206 YGPQGAPLVA------PNGDIGADGMVMNLASMLAGTVTNPFGDGYYQGSR-DAPLEAAT 258
P G+ VA PNG++G DGM+ +A LA +NP +G+Y G AP E A
Sbjct: 208 PFP-GSGFVAREKMKPPNGEVGIDGMISVIAHELAEVSSNPMLNGWYGGEDATAPTEIAD 266
Query: 259 ACPGVFGSGAYPGFAGELKVDQATGASYNANGANGRKYLLPALYNPSTGTC 309
C GV+GSG G+ G + D+ YN G GRKYL+ +++ + C
Sbjct: 267 LCLGVYGSGGGGGYMGSVYKDRWRNV-YNVKGVKGRKYLIQWVWDLNRNRC 316
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,196,837
Number of extensions: 247193
Number of successful extensions: 435
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 410
Number of HSP's successfully gapped: 8
Length of query: 313
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 215
Effective length of database: 8,419,801
Effective search space: 1810257215
Effective search space used: 1810257215
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)