BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0756200 Os02g0756200|AK101655
(308 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G08950.1 | chr4:5740378-5741322 FORWARD LENGTH=315 333 9e-92
AT1G35140.1 | chr1:12852089-12853018 FORWARD LENGTH=310 305 2e-83
AT5G64260.1 | chr5:25703980-25704897 FORWARD LENGTH=306 297 4e-81
AT5G09440.1 | chr5:2938397-2939233 FORWARD LENGTH=279 252 2e-67
AT5G51550.1 | chr5:20939793-20940806 REVERSE LENGTH=338 167 8e-42
AT2G17230.1 | chr2:7494892-7495983 REVERSE LENGTH=364 149 2e-36
AT3G02970.1 | chr3:669217-670495 REVERSE LENGTH=333 146 1e-35
AT2G35150.1 | chr2:14817220-14818191 REVERSE LENGTH=324 140 9e-34
>AT4G08950.1 | chr4:5740378-5741322 FORWARD LENGTH=315
Length = 314
Score = 333 bits (853), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 169/301 (56%), Positives = 209/301 (69%), Gaps = 11/301 (3%)
Query: 17 QLSMGSRRLMELYIPPASDQLTYHHGSVLSGDIPVSILWYGKFTPTQMSIIADFVVSLTG 76
Q+S+ +R L P L YH G++LSG I V+++WYGKF P+Q +II+DF+ SLT
Sbjct: 16 QISVSARNLASQE-PNQFQLLKYHKGALLSGKISVNLIWYGKFKPSQRAIISDFITSLTH 74
Query: 77 -APNAAT---PSVGQWWGTIEQLYLSNAATNSQTSTRVLLDEQVSDEQCSLGKSLTLAQI 132
+P + T PSV WW T E+ Y + + + + L +Q+ DE CSLGKSLT +I
Sbjct: 75 TSPTSKTLHQPSVATWWKTTEKYYKLATPSKNSSPLSLTLGKQIIDESCSLGKSLTDKKI 134
Query: 133 DQLAARVGTKRGGVALVFTDEDVTVEGFCSSRCGKHGSDASAGT-----THIWVGNSAKQ 187
LA++ G +R + +V T DVTV GF SRCG HG G +IWVGNS Q
Sbjct: 135 QTLASK-GDQRNAINVVLTSADVTVTGFGMSRCGTHGHARGLGKRGSKFAYIWVGNSETQ 193
Query: 188 CPGQCAWPFAQPVYGPQGTPLVAPNNDVGADGMVMILASMVAGTVTNPYGDGFYQGPQDA 247
CPGQCAWPF PVYGPQ PLVAPNNDVG DGMV+ LAS++AGT TNP+G+G+YQGPQ+A
Sbjct: 194 CPGQCAWPFHAPVYGPQSPPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQGPQNA 253
Query: 248 PLEACSACPGVYGSGAYPGNAGKLLVDATTGASYNANGANRRKYLLPALYNPATSSCDTL 307
PLEA SACPGVYG GAYPG AG LLVD TTG S+NA GAN RK+LLPALY+P TS+C T+
Sbjct: 254 PLEAASACPGVYGKGAYPGYAGDLLVDTTTGGSFNAYGANGRKFLLPALYDPTTSACSTM 313
Query: 308 V 308
V
Sbjct: 314 V 314
>AT1G35140.1 | chr1:12852089-12853018 FORWARD LENGTH=310
Length = 309
Score = 305 bits (781), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/283 (55%), Positives = 197/283 (69%), Gaps = 16/283 (5%)
Query: 37 LTYHHGSVLSGDIPVSILWYGKFTPTQMSIIADFVVSLTGAPN---AATPSVGQWWGTIE 93
YH G++L+GD+ ++++WYGKF P+Q +I+ DFV SL+ + A PSV WW T+E
Sbjct: 32 FQYHKGALLTGDVSINLIWYGKFKPSQRAIVTDFVASLSSSRRSTMAQNPSVATWWKTVE 91
Query: 94 QLYLSNAATNSQTSTRVL---LDEQVSDEQCSLGKSLTLAQIDQLAARVGTKRGGVALVF 150
+ Y T+TR L L EQ+ D+ S+GKSLT + LAA+ G + V +V
Sbjct: 92 KYY----QFRKMTTTRGLSLSLGEQILDQGYSMGKSLTEKNLKDLAAK-GGQSYAVNVVL 146
Query: 151 TDEDVTVEGFCSSRCGKHGSDASAGTT-----HIWVGNSAKQCPGQCAWPFAQPVYGPQG 205
T DVTV+GFC +RCG HG+ + +G +IWVGNS QCPGQCAWPF PVYGPQ
Sbjct: 147 TSADVTVQGFCMNRCGSHGTGSGSGKKGSRFAYIWVGNSETQCPGQCAWPFHAPVYGPQS 206
Query: 206 TPLVAPNNDVGADGMVMILASMVAGTVTNPYGDGFYQGPQDAPLEACSACPGVYGSGAYP 265
PLVAPNNDVG DGMV+ LAS++A T TNP+GDG+YQGP+ APLEA SAC GVYG G+YP
Sbjct: 207 PPLVAPNNDVGLDGMVINLASLMAATATNPFGDGYYQGPKTAPLEAGSACTGVYGKGSYP 266
Query: 266 GNAGKLLVDATTGASYNANGANRRKYLLPALYNPATSSCDTLV 308
G AG+LLVDATTG SYN G N RKYLLPAL++P T SC TL
Sbjct: 267 GYAGELLVDATTGGSYNVKGLNGRKYLLPALFDPKTDSCSTLF 309
>AT5G64260.1 | chr5:25703980-25704897 FORWARD LENGTH=306
Length = 305
Score = 297 bits (761), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/281 (51%), Positives = 192/281 (68%), Gaps = 17/281 (6%)
Query: 37 LTYHHGSVLSGDIPVSILWYGKFTPTQMSIIADFVVSLTG---APNAATPSVGQWWGTIE 93
+ YH+G +L G+I V+++WYGKFTP Q S+I DF+ SL A +AA PSV WW T E
Sbjct: 33 MKYHNGVLLKGNITVNLVWYGKFTPIQRSVIVDFIHSLNSKDVASSAAVPSVASWWKTTE 92
Query: 94 QLYLSNAATNSQTSTRVLLDEQVSDEQCSLGKSLTLAQIDQLAARVGTKRGGVALVFTDE 153
+ S+ +++ +Q+ E LGKSL + L+ ++ + +V T +
Sbjct: 93 KY--------KGGSSTLVVGKQLLLENYPLGKSLKNPYLRALSTKLNGGLRSITVVLTAK 144
Query: 154 DVTVEGFCSSRCGKHGSD------ASAGTTHIWVGNSAKQCPGQCAWPFAQPVYGPQGTP 207
DVTVE FC SRCG HGS A+ G ++WVGNS QCPG CAWPF QP+YGPQ P
Sbjct: 145 DVTVERFCMSRCGTHGSSGSNPRRAANGAAYVWVGNSETQCPGYCAWPFHQPIYGPQTPP 204
Query: 208 LVAPNNDVGADGMVMILASMVAGTVTNPYGDGFYQGPQDAPLEACSACPGVYGSGAYPGN 267
LVAPN DVG DGM++ LA+++A TVTNP+ +G+YQGP APLEA SACPG++GSG+YPG
Sbjct: 205 LVAPNGDVGVDGMIINLATLLANTVTNPFNNGYYQGPPTAPLEAVSACPGIFGSGSYPGY 264
Query: 268 AGKLLVDATTGASYNANGANRRKYLLPALYNPATSSCDTLV 308
AG++LVD TTG+SYNA G RKYLLPA+++P +S+C TLV
Sbjct: 265 AGRVLVDKTTGSSYNARGLAGRKYLLPAMWDPQSSTCKTLV 305
>AT5G09440.1 | chr5:2938397-2939233 FORWARD LENGTH=279
Length = 278
Score = 252 bits (643), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 180/268 (67%), Gaps = 25/268 (9%)
Query: 45 LSGDIPVSILWYGKFTPTQMSIIADFVVSLTGAPNAATPSVGQWWGTIEQLYLSNAATNS 104
L+G+I ++++WYGKFTP Q SII DF+ S++ A PSV WW T E+ Y + +T
Sbjct: 32 LNGNITLNLIWYGKFTPIQRSIIVDFIRSISSVTAAKGPSVASWWKTTEK-YKTGVST-- 88
Query: 105 QTSTRVLLDEQVSDEQCSLGKSLTLAQIDQLAARV--GTKRGGVALVFTDEDVTVEGFCS 162
+++ +Q+ E LGKSL + L++++ G R + +V T +DVTVEG C
Sbjct: 89 -----LVVGKQLLLENYPLGKSLKSPYLRALSSKLNAGGARS-ITVVLTAKDVTVEGLCM 142
Query: 163 SRCGKHGSDASAGTT--HIWVGNSAKQCPGQCAWPFAQPVYGPQGTPLVAPNNDVGADGM 220
+RCG HGS +S+ + ++WVGNS QCPG CAWPF QP+YGPQ PLVAPN DVG DGM
Sbjct: 143 NRCGTHGSKSSSVNSGAYVWVGNSETQCPGYCAWPFHQPIYGPQSPPLVAPNGDVGVDGM 202
Query: 221 VMILASMVAGTVTNPYGDGFYQGPQDAPLEACSACPGVYGSGAYPGNAGKLLVDATTGAS 280
++ +A+++ TVTNP +P EA SAC G++GSGAYPG AG++LVD T+GAS
Sbjct: 203 IINIATLLVNTVTNP-----------SP-EAVSACTGIFGSGAYPGYAGRVLVDKTSGAS 250
Query: 281 YNANGANRRKYLLPALYNPATSSCDTLV 308
YNA G RKYLLPAL++P TS+C T+V
Sbjct: 251 YNALGLAGRKYLLPALWDPQTSTCKTMV 278
>AT5G51550.1 | chr5:20939793-20940806 REVERSE LENGTH=338
Length = 337
Score = 167 bits (422), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 153/283 (54%), Gaps = 20/283 (7%)
Query: 36 QLTYHHGSVLSGDIPVSILWYGKFTPTQMSIIADFVVSLTGAPNAATPSVGQWWGTIEQL 95
+L YH G VL+ +I V +WYG + +Q II +F+ S++ A + PSV WW T+ QL
Sbjct: 54 RLRYHMGPVLTNNITVHPIWYGTWQKSQKKIIREFINSIS-AVGSKHPSVSGWWKTV-QL 111
Query: 96 YLSNAATNSQTSTRVLLDEQVSDEQCSLGKSLTLAQIDQLAARVGTKRG---------GV 146
Y +N + R L E+ +D S GKSLT I + T R G+
Sbjct: 112 YTDQTGSNITGTVR--LGEEKNDRFYSHGKSLTRLSIQSVIKSAVTSRSRPLPVNPKSGL 169
Query: 147 ALVFTDEDVTVEGFCSSRCGKH----GSDASAGTTHIWVGNSAKQCPGQCAWPFAQPVYG 202
L+ T +DV V+ FC CG H S + WVGNSAK CPG CA+PFA P +
Sbjct: 170 YLLLTADDVYVQDFCGQVCGFHYFTFPSIVGFTLPYAWVGNSAKLCPGVCAYPFAVPAFI 229
Query: 203 PQGTPLVAPNNDVGADGMVMILASMVAGTVTNPYGDGFYQGPQD-APLEACSACPGVYGS 261
P P+ +PN DVG DGM+ ++A +A TNP + +Y GP AP+E C G+YG+
Sbjct: 230 PGLKPVKSPNGDVGVDGMISVIAHEIAELATNPLVNAWYAGPDPVAPVEIADLCEGIYGT 289
Query: 262 GAYPGNAGKLLVDATTGASYNANGANRRKYLLPALYNPATSSC 304
G G++L D +GA+YN NG RR+YL+ L++ S C
Sbjct: 290 GGGGSYTGQMLNDH-SGATYNVNGI-RRRYLIQWLWSHVVSYC 330
>AT2G17230.1 | chr2:7494892-7495983 REVERSE LENGTH=364
Length = 363
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 150/284 (52%), Gaps = 20/284 (7%)
Query: 36 QLTYHHGSVLSGD-IPVSILWYGKFTPTQMSIIADFVVSLTGAPNAATPSVGQWWGTIEQ 94
L YH G VLS I + ++WYG+++ S+I DF+ S++ A A +PSV +WW T
Sbjct: 78 HLRYHMGPVLSSSPINIYVIWYGQWSRPHKSLIRDFLNSISDA-KAPSPSVSEWWRTAS- 135
Query: 95 LYLSNAATNSQTSTRVLLDEQVSDEQCSLGKSLTLAQIDQL---AARVGT----KRGGVA 147
L T S S VL+ + SD + S G+ LT I ++ AAR + + G+
Sbjct: 136 --LYTDQTGSNVSRSVLIAGEYSDSKYSHGQHLTRLTIQEVIASAARSASFPVDHKNGMY 193
Query: 148 LVFTDEDVTVEGFCSSRCGKH----GSDASAGTTHIWVGNSAKQCPGQCAWPFAQPVYGP 203
LV T DVT++ FC + CG H S + WVG S KQCP CA+PFA P Y
Sbjct: 194 LVLTSHDVTMQDFCRAVCGFHYFTFPSMVGYTMPYAWVGQSGKQCPEVCAYPFALPGYMG 253
Query: 204 QGTP--LVAPNNDVGADGMVMILASMVAGTVTNPYGDGFYQGPQ-DAPLEACSACPGVYG 260
G P L PN + G DGMV ++ +A V+NP + +Y G AP E C G+YG
Sbjct: 254 HGGPGELRPPNGETGVDGMVSVIGHELAEVVSNPLINAWYAGEDPTAPTEIGDLCEGLYG 313
Query: 261 SGAYPGNAGKLLVDATTGASYNANGANRRKYLLPALYNPATSSC 304
SG G G+++ D G ++N NG RK+L+ ++NP +C
Sbjct: 314 SGGGGGYIGQVMRD-REGKTFNMNGKGGRKFLVQWIWNPNLKAC 356
>AT3G02970.1 | chr3:669217-670495 REVERSE LENGTH=333
Length = 332
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 139/295 (47%), Gaps = 34/295 (11%)
Query: 44 VLSGDIPVSILWYGKFTPTQMSIIADFVVSLT-GAPNAATPSVGQWWGTIEQL------- 95
+ +G + +S+LWYG+FTPTQ + DF+ SL A P V WW +E
Sbjct: 34 IPNGTLDLSLLWYGQFTPTQKERVHDFIESLNFDAKEGLDPKVSAWWKVVESYQERFEVK 93
Query: 96 -YLSNAATNSQTSTRVLLD--EQVSDEQCSLGKSLTLAQIDQLAAR-VGTKRGGVALVFT 151
+N + R+ + DE+ GK LT+ ++L +G V +V
Sbjct: 94 DIYRQKKSNRTVAPRIKVKVVRSYVDEKMKYGKELTMGNGEKLVETAIGNMSKVVPVVLL 153
Query: 152 DEDVTVEG--FCSSRCGKHGSDASAGTT----HIWVGNSAKQCPGQCAWPFAQPVYGPQG 205
V G FC C + G +I V N +CPG+CAWPF GP+G
Sbjct: 154 SAQVRAHGVGFCDGTCQHNALAKIKGQKEPRRYIMVSNPEVECPGECAWPFHTADKGPRG 213
Query: 206 TPLVAPNNDVGADGMVMILASMVAGTVTNP-------------YGDGFYQGPQDAPL--- 249
+ +VGAD +V+ LA+ +A TNP Y D + + + +
Sbjct: 214 MTYQPASGEVGADALVIQLATGLADLATNPDLTKSLFKSETTPYNDDVKKNHESSSMYIV 273
Query: 250 EACSACPGVYGSGAYPGNAGKLLVDATTGASYNANGANRRKYLLPALYNPATSSC 304
+ + C V+GSGA+PG G++ VD TG ++N++G N K+L+P++++P T SC
Sbjct: 274 DPATKCTRVFGSGAFPGFTGRIRVDPITGGAFNSHGINHLKFLIPSIWDPKTKSC 328
>AT2G35150.1 | chr2:14817220-14818191 REVERSE LENGTH=324
Length = 323
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 142/286 (49%), Gaps = 23/286 (8%)
Query: 37 LTYHHGSVLSGDI-PVSILWYGKFTPTQMSIIADFVVSLTGAPNAATPSVGQWWGTIEQL 95
L YH G V+S + + I+WYG++ PT SII DF+ S++ A PSV WW T+
Sbjct: 36 LQYHLGPVISSPVTSLYIIWYGRWNPTHQSIIRDFLYSVSAPAPAQYPSVSNWWKTVR-- 93
Query: 96 YLSNAATNSQTSTRVLLDEQVSDEQCSLGKSLTLAQIDQLAARVGTKR------GGVALV 149
L T S + ++L + D S G LT + + T + G+ LV
Sbjct: 94 -LYRDQTGSNITDTLVLSGEFHDSTYSHGSHLTRFSVQSVIRTALTSKLPLNAVNGLYLV 152
Query: 150 FTDEDVTVEGFCSSRCGKH----GSDASAGTTHIWVGNSAKQCPGQCAWPFAQPVYGPQG 205
T +DV ++ FC + CG H S A + WVGNS +QCP CA+PFAQP P G
Sbjct: 153 LTSDDVEMQEFCRAICGFHYFTFPSVVGATVPYAWVGNSERQCPEMCAYPFAQPKPFP-G 211
Query: 206 TPLVA------PNNDVGADGMVMILASMVAGTVTNPYGDGFYQGPQ-DAPLEACSACPGV 258
+ VA PN +VG DGM+ ++A +A +NP +G+Y G AP E C GV
Sbjct: 212 SGFVAREKMKPPNGEVGIDGMISVIAHELAEVSSNPMLNGWYGGEDATAPTEIADLCLGV 271
Query: 259 YGSGAYPGNAGKLLVDATTGASYNANGANRRKYLLPALYNPATSSC 304
YGSG G G + D YN G RKYL+ +++ + C
Sbjct: 272 YGSGGGGGYMGSVYKDRWRNV-YNVKGVKGRKYLIQWVWDLNRNRC 316
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.131 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,755,952
Number of extensions: 287016
Number of successful extensions: 612
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 581
Number of HSP's successfully gapped: 8
Length of query: 308
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 210
Effective length of database: 8,419,801
Effective search space: 1768158210
Effective search space used: 1768158210
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)