BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0742000 Os02g0742000|AK072328
(1671 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48050.1 | chr3:17734270-17739412 REVERSE LENGTH=1614 550 e-156
AT3G48060.1 | chr3:17743234-17748372 REVERSE LENGTH=1612 539 e-153
AT4G11560.1 | chr4:7000095-7003445 REVERSE LENGTH=588 87 9e-17
AT2G25120.1 | chr2:10689934-10691569 FORWARD LENGTH=381 66 1e-10
AT4G23120.1 | chr4:12113308-12115523 FORWARD LENGTH=361 62 4e-09
AT3G43990.1 | chr3:15782538-15785178 REVERSE LENGTH=381 61 4e-09
AT4G24200.1 | chr4:12556927-12559929 REVERSE LENGTH=1001 54 1e-06
>AT3G48050.1 | chr3:17734270-17739412 REVERSE LENGTH=1614
Length = 1613
Score = 550 bits (1416), Expect = e-156, Method: Compositional matrix adjust.
Identities = 347/762 (45%), Positives = 440/762 (57%), Gaps = 42/762 (5%)
Query: 86 KDGREFRVGDCALFQA-VEVPPFIGLIRWIEKKEEGFPKLRVSWLYRPADIKLNKGTQLC 144
KDGR+ VGDCALF+ + PPFIG+IR I +EE KL V+WLYRP ++KL KG L
Sbjct: 46 KDGRKISVGDCALFKPPQDCPPFIGIIRLIIAEEEDKLKLGVNWLYRPTELKLGKGILLE 105
Query: 145 AAPNEIFYSFHQDETSAVSLLHPCKVAFLRKGVELPAGISSFVCRRVYDIDNKCLWWLTD 204
A PNE+FYSFH+D A SLLHPCKVAFL +GVELP+GISSFVCRRVYD+ N+ LWWLTD
Sbjct: 106 AEPNELFYSFHEDNIPAASLLHPCKVAFLPRGVELPSGISSFVCRRVYDVTNERLWWLTD 165
Query: 205 QDYINERQEEVNRLLHRTKLEMHAAVQSGGRSPKRLNGPSSAQQKSGSDGAQN----CGL 260
QDYI++RQ EV++LL +T+ EMH +Q GGRSPK +N P+++Q K DG QN
Sbjct: 166 QDYIDDRQLEVDKLLCKTRSEMHTTLQQGGRSPKSMNSPTTSQPK---DGIQNSNSFLSQ 222
Query: 261 SKGKKRDRGEQGTDPAKRDRERPLKAEDGESGNFKVEN-LKSEITKITEKGGLPHAEAVE 319
KG+KR+R + G++ K RER + +D SG + E+ LKSEI K TEKGGL +E VE
Sbjct: 223 GKGRKRERMDHGSESVK--RERSSRVDDSGSGPLRTESGLKSEILKFTEKGGLVDSEGVE 280
Query: 320 KLVHLMQLDRTERKIDLPGRVILADIIAATESPDCLGRFVQLRGLPVFDDWLQEAHKGKS 379
KLV LM +R E+KIDL GR ILA ++AAT+ DCL RFVQLRGLPVFD+WLQE HKGK
Sbjct: 281 KLVQLMLPERNEKKIDLVGRAILAGVVAATDKFDCLSRFVQLRGLPVFDEWLQEVHKGKV 340
Query: 380 GEAGSPKETDKPMEDXXXXXXXXXXXXPINLTALQSCSIGKSVNHLRSHKNPEIQKKAKC 439
G+ GSPK++D+ ++D P+NL ALQ+C+IGKSVNHLRSHKN EI KKA+
Sbjct: 341 GDGGSPKDSDRLVDDFLLVLLRALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARS 400
Query: 440 LVENWKKRVDAEMKSNDVKPVVSGQAVSWPGK--PGFPEIXXXXXXXXXXXXXXXXXXXX 497
LV+ WKKRV+AEM + S Q VSWPG+ G
Sbjct: 401 LVDTWKKRVEAEMDAKS----GSNQGVSWPGRLSHGGRHSGGSAEANKTSSSHLHASKSV 456
Query: 498 XXXXXXXLTSKPVAADAAAKSSPVISGSSKLQHMQPGNAVTNLKEQPSKSTGGTCGSELP 557
K VA + S GS G V+ +Q + GG L
Sbjct: 457 SVKQQVENNLKCVATSPGSTRSAPSPGS--------GGNVSKDGQQRNAGAGGVS-EVLA 507
Query: 558 AVKEEKXXXXXXXXXXXXXXXXEHAKTIG-SSKEDARSSTAASGVAYKTSGSSSRVHRRT 616
AVK+EK EHAKT KEDARSSTA S + K SG SSR HR++
Sbjct: 508 AVKDEKSSSSSQSHNNSQSCSSEHAKTGNLCGKEDARSSTAGSTLK-KCSGGSSR-HRKS 565
Query: 617 NNGLLGSGIQ---KEAAVARSSSLDHSSVQEKVSQSGTACEKGADIQSDQGNSHRLIVRF 673
NN GS + A ++RS S + EK+SQS EK ++ +G+ ++LIV+
Sbjct: 566 NNVFQGSSSSASPRGAGLSRSFSSHRNVPSEKISQSSLTSEKTLEVPLTEGSGNKLIVKL 625
Query: 674 PNXXXXXXXXXXXXXFEDPSFTGSRASSPV-ADKHEQSDRRVKMKTENSNPHLGNDTNAE 732
PN EDP+ SR SSPV A K E D + K + P++ + NAE
Sbjct: 626 PNRGRSPAQSVSGGSLEDPAPVNSRVSSPVHAVKQELCDNNGREKNHSYRPNVSSVLNAE 685
Query: 733 SWHSNDVKGA-SVSEEGDKSPRAMLTDDSKTTEGAGRDVPVSRV-ACSSYANEKGICSSE 790
SW SN++K + S+E SP ++ D + + D V SS NE
Sbjct: 686 SWQSNELKDILTGSQEAAGSP--LVAGDERGGDLKDSDKASGNVKGTSSLGNEFKSGERH 743
Query: 791 TGLTKLFNPMNALIE--IKYSEASHSLQAGDDTAMNLLASVA 830
G + MNALIE ++YSE + SL DD MNLLASVA
Sbjct: 744 GG---TLSSMNALIESCVRYSETNASLAGSDDVGMNLLASVA 782
Score = 298 bits (764), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 198/501 (39%), Positives = 272/501 (54%), Gaps = 38/501 (7%)
Query: 1193 AKLDFDLNEGIPGDE---GHLSEPATSPAVCSSAIHLPRPSPF-VSPISSGLPAPI--AA 1246
A+++FDLNEG GD+ G + + S + + + + PF V+P+SSG A I AA
Sbjct: 1129 ARVEFDLNEGFDGDDAKHGDSNNFSGSVFLTPTPLQPVKTLPFPVAPVSSGTRASITVAA 1188
Query: 1247 PAKGPFVPPENLIRLKSETGWKGSAATSAFRPAEPRKIFEMTLSASGILVSDA---AGKN 1303
AKGPFVPPE+L+R K GW+GSAATSAFRPAEPRK ++ LS + SDA AGK
Sbjct: 1189 AAKGPFVPPEDLLRNKGAVGWRGSAATSAFRPAEPRKPQDVLLSINNTSTSDASTSAGKQ 1248
Query: 1304 -RPALDIDLNVADEQFLEEDVSQSSVQTTGSESGNTRRSNGPVR-----------SVGFE 1351
R LD DLNV DE+ LE+ SQ S T S T S VR S G +
Sbjct: 1249 TRTFLDFDLNVPDERVLEDLASQRSGNPTNCTSDIT-NSFDQVRSGVMGSALDHSSGGLD 1307
Query: 1352 LDLNRADEVAENGQIVSNTNHRVEVPLLSRPLPGVFSSSDANSSRDFDLNNGPTLDEAGT 1411
LDLN+ D+ + N++HR++ LP RDFDLN+GP D+A
Sbjct: 1308 LDLNKVDDSTDMISYTMNSSHRLDSSFQQVKLPST------GGRRDFDLNDGPVGDDAAV 1361
Query: 1412 EHAPRSLSSKNTSSIPFLPQVASMRMNSAEMSNISPWFASANACAPVAIKSFLPSRGEQP 1471
E + L+ + S +P P ++ +R+N M++ S WF +ANA + V++ +P RG+QP
Sbjct: 1362 EPS-MVLNQHSRSGLPSQPSLSGIRVNGENMASFSTWFPAANAYSAVSMPPIMPERGDQP 1420
Query: 1472 HPVETAAGSGTQRIITSMADGVQHGSDPSRTPVISTSPTMMFHPPAYQYAGFPFTPSVHL 1531
P+ A G QR++ + R PV+S+SP M F +QY FPF S +
Sbjct: 1421 FPM--IATRGPQRMLGPTTGVSSFTPEGYRGPVLSSSPAMPFQSTTFQYPVFPFGNSFPV 1478
Query: 1532 QAPGFSIGSTSYANSAPGGIPYFPTIAPTLVGPAGALPAQHTRQYAINLPEGSSTVG-HD 1590
+ F ST++ +S+ G FP + ++GP +P+ + R Y + LP G S G D
Sbjct: 1479 TSANFPGASTAHMDSSSSGRACFPGVNSQILGPGVPVPSNYPRPYIVGLPNGGSNGGVLD 1538
Query: 1591 NNRKWGRQGLDLNSGPGSVDVEVKDDRVTLPVRQNFIAPPHAFVDEHTRMYQMPPGVGIK 1650
N KW R GLDLNSGPG + E +D+ TL RQ + ++ RMYQM GV +K
Sbjct: 1539 NGAKWFRSGLDLNSGPGGHETEGRDES-TLVARQLSSSASLPLKEDQARMYQMSGGV-LK 1596
Query: 1651 RKEPEGSWDAERSSYKQLSWQ 1671
RKEPEG WD Y+Q SWQ
Sbjct: 1597 RKEPEGGWDG----YRQSSWQ 1613
>AT3G48060.1 | chr3:17743234-17748372 REVERSE LENGTH=1612
Length = 1611
Score = 539 bits (1389), Expect = e-153, Method: Compositional matrix adjust.
Identities = 347/764 (45%), Positives = 437/764 (57%), Gaps = 46/764 (6%)
Query: 86 KDGREFRVGDCALFQA-VEVPPFIGLIRWIEKKEEGFPKLRVSWLYRPADIKLNKGTQLC 144
KDGR+ VGDCALF+ + PPFIG+IR I +EE KL V+WLYRP ++KL KG L
Sbjct: 46 KDGRKISVGDCALFKPPQDCPPFIGIIRLIIAEEEDKLKLGVNWLYRPTELKLGKGILLE 105
Query: 145 AAPNEIFYSFHQDETSAVSLLHPCKVAFLRKGVELPAGISSFVCRRVYDIDNKCLWWLTD 204
A PNE+FYSFH+D A SLLHPCKVAFL +GVELP+GISSFVCRRVYD+ N+ LWWLTD
Sbjct: 106 AEPNELFYSFHEDNIPAASLLHPCKVAFLPRGVELPSGISSFVCRRVYDVTNERLWWLTD 165
Query: 205 QDYINERQEEVNRLLHRTKLEMHAAVQSGGRSPKRLNGPSSAQQKSGSDGAQN----CGL 260
QDYI++RQ EV++LL +T+ EMH +Q GGRSPK +N P+++Q K DG QN
Sbjct: 166 QDYIDDRQLEVDKLLCKTRSEMHTTLQQGGRSPKSMNSPTTSQPK---DGIQNNNSLFSQ 222
Query: 261 SKGKKRDRGEQGTDPAKRDRERPLKAEDGESGNFKVEN-LKSEITKITEKGGLPHAEAVE 319
SKG+KR+R + G++ K RER + +D SG + E+ L SEI K TEKGGL +E VE
Sbjct: 223 SKGRKRERMDHGSESVK--RERSSRVDDSGSGPLRTESGLTSEILKFTEKGGLVDSEGVE 280
Query: 320 KLVHLMQLDRTERKIDLPGRVILADIIAATESPDCLGRFVQLRGLPVFDDWLQEAHKGKS 379
KLV LM +R E+KIDL GR ILA +AAT DCL RFVQLRGLPVFD+WLQE HKGK
Sbjct: 281 KLVQLMLPERNEKKIDLVGRAILAGFVAATNRFDCLSRFVQLRGLPVFDEWLQEVHKGKV 340
Query: 380 GEAGSPKETDKPMEDXXXXXXXXXXXXPINLTALQSCSIGKSVNHLRSHKNPEIQKKAKC 439
G+ GSPK++D+ ++D P+NL ALQ+C+IGKSVNHLRSHKN EI KKA+
Sbjct: 341 GDGGSPKDSDRLVDDFLLVLLRALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARS 400
Query: 440 LVENWKKRVDAEMKSNDVKPVVSGQAVSWPGK--PGFPEIXXXXXXXXXXXXXXXXXXXX 497
LV+ WKKRV+AEM + S Q VSWPG+ G
Sbjct: 401 LVDTWKKRVEAEMDAKS----GSNQGVSWPGRLSHGGRHSGGSAEANKTSSSHLHASKSV 456
Query: 498 XXXXXXXLTSKPVAADAAAKSSPVISGSSKLQHMQPGNAVTNLKEQPSKSTGGTCGSELP 557
K VA + S GS G V+ +Q + GG L
Sbjct: 457 SVKQQVENNLKCVATSPGSTRSAPSPGS--------GGNVSKDGQQRNAGAGGVS-EVLA 507
Query: 558 AVKEEKXXXXXXXXXXXXXXXXEHAKTIG-SSKEDARSSTAASGVAYKTSGSSSRVHRRT 616
AVK+EK EHAKT KEDARSSTA S + K SG SSR HR++
Sbjct: 508 AVKDEKSSSSSQSHNNSQSCSSEHAKTGNLCGKEDARSSTAGSTLK-KCSGGSSR-HRKS 565
Query: 617 NNGLLGSGIQ---KEAAVARSSSLDHSSVQEKVSQSGTACEKGADIQSDQGNSHRLIVRF 673
NN GS + A ++RS S + EK+SQS EK ++ +G+ ++LIV+
Sbjct: 566 NNVFQGSSSSASPRGAGLSRSFSSHRNVPSEKISQSSLTSEKTLEVPLTEGSGNKLIVKL 625
Query: 674 PNXXXXXXXXXXXXXFEDPSFTGSRASSPVAD-KHEQSDRRVKMKTENSNPHLGNDTNAE 732
P EDP+ SR SSPV K E D + K + + + NAE
Sbjct: 626 PR-GRSPAQSVSGGSLEDPAPVNSRVSSPVHTVKQELCDNNWREKNHSYRADVSSVLNAE 684
Query: 733 SWHSNDVKGA-SVSEEGDKSPRAMLTDDSKTTEGAGRDVPVSR---VACSSYANEKGICS 788
SW SN++K + S+E SP + D+ EGA +D + A SS NE
Sbjct: 685 SWQSNELKDILTGSQEATGSPLVVAGDE---REGALKDSDKASGNVKATSSLGNEFKSGE 741
Query: 789 SETGLTKLFNPMNALIE--IKYSEASHSLQAGDDTAMNLLASVA 830
G + MNALIE ++YSE + SL DD MNLLASVA
Sbjct: 742 RHGG---TLSSMNALIESCVRYSETNASLAGSDDVGMNLLASVA 782
Score = 301 bits (771), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/496 (39%), Positives = 271/496 (54%), Gaps = 38/496 (7%)
Query: 1193 AKLDFDLNEGIPGDEGHLSEPATSPAVCSSAIHLPRPS------PF-VSPISSGLPAPI- 1244
A+++FDLNEG GD+ ++ S S + P P PF V+P+SSG+PA I
Sbjct: 1131 ARVEFDLNEGFDGDD---AQHGDSNNFSGSVVLTPTPLQPVNTLPFPVAPVSSGIPASIT 1187
Query: 1245 -AAPAKGPFVPPENLIRLKSETGWKGSAATSAFRPAEPRKIFEMTLSASGILVSDA---A 1300
AA KGPFVPPE+L+R K GW+GSAATSAFRPAEPRK ++ LS + SDA A
Sbjct: 1188 VAAAVKGPFVPPEDLLRYKGAVGWRGSAATSAFRPAEPRKAQDVLLSINNTSTSDASTSA 1247
Query: 1301 GK-NRPALDIDLNVADEQFLEEDVSQSSVQTTGSESGNTRRSNGPVRS--VGFE------ 1351
GK R LD DLNV DE+ LE+ SQ S T SG T + VRS +G
Sbjct: 1248 GKQTRTFLDFDLNVPDERVLEDLASQRSGNPTNCTSGITNNFD-QVRSGVMGSALDHSSG 1306
Query: 1352 -LDLNRADEVAENGQIVSNTNHRVEVPLLSRPLPGVFSSSDANSSRDFDLNNGPTLDEAG 1410
LDLN+ D++ + N++HR++ LP RDFDLN+GP D+A
Sbjct: 1307 GLDLNKVDDLTDMNSYTMNSSHRLDSSFQQVKLPST------GGRRDFDLNDGPVGDDAA 1360
Query: 1411 TEHAPRSLSSKNTSSIPFLPQVASMRMNSAEMSNISPWFASANACAPVAIKSFLPSRGEQ 1470
E + L+ + S +P P ++ +R+N M++ S WF +ANA + V++ +P RG+Q
Sbjct: 1361 VEPS-MVLNQHSRSGLPSQPSLSGIRVNGENMASFSTWFPAANAYSAVSMPPIMPERGDQ 1419
Query: 1471 PHPVETAAGSGTQRIITSMADGVQHGSDPSRTPVISTSPTMMFHPPAYQYAGFPFTPSVH 1530
P P+ A G QR++ + R PV+S+SP M F +QY FPF S
Sbjct: 1420 PFPM--IATRGPQRMLGPTTGVSSFSPEGYRGPVLSSSPAMPFQSTTFQYPVFPFGNSFP 1477
Query: 1531 LQAPGFSIGSTSYANSAPGGIPYFPTIAPTLVGPAGALPAQHTRQYAINLPEGSSTVG-H 1589
+ F ST++ +S+ G YFP + ++GP +P+ + R Y + LP G S G
Sbjct: 1478 VTPANFPGASTAHMDSSSSGRAYFPGVNSQILGPGVPVPSNYPRPYIVGLPNGGSNGGVL 1537
Query: 1590 DNNRKWGRQGLDLNSGPGSVDVEVKDDRVTLPVRQNFIAPPHAFVDEHTRMYQMPPGVGI 1649
DN+ KW R GLDLNSGPG + E +D+ TL RQ + ++ RMYQM GV +
Sbjct: 1538 DNSAKWFRSGLDLNSGPGGHETEGRDES-TLVSRQLSSSASVPSKEDQARMYQMSGGV-L 1595
Query: 1650 KRKEPEGSWDAERSSY 1665
KRKEPEG WD R S
Sbjct: 1596 KRKEPEGGWDGYRQSL 1611
>AT4G11560.1 | chr4:7000095-7003445 REVERSE LENGTH=588
Length = 587
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query: 106 PFIGLIRWIEKKEEGFPKLRVSWLYRPADI-KLNKGTQLCAAPNEIFYSFHQDETSAVSL 164
P++ +I+ I + ++G + W YRP + K G + E+FYSFH+DE A S+
Sbjct: 148 PYVAIIKDITQTKDGSMMILGQWFYRPEEAEKRGGGNWQSSDTRELFYSFHRDEVPAESV 207
Query: 165 LHPCKVAFLRKGVELPAGISS--FVCRRVYDIDNKCLWWLTDQDYINERQEEVNRLLHRT 222
+H C V F+ +LP ++ F+ R+VYD K LW LTD+DY + +Q E++ L+ +T
Sbjct: 208 MHRCVVYFVPAHKQLPKRKNNPGFIVRKVYDTVEKKLWKLTDKDYEDSKQREIDVLVKKT 267
>AT2G25120.1 | chr2:10689934-10691569 FORWARD LENGTH=381
Length = 380
Score = 66.2 bits (160), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 106 PFIGLIR--WIEKKEEGFPKLRVSWLYRPADI-KLNKGTQLCAAPNEIFYSFHQDETSAV 162
P+ +I+ +I KE+ + KL V W YRP D+ K + G +FYSFH+DE A
Sbjct: 113 PYCAIIKDIYIPNKEK-YVKLAVHWFYRPEDVDKKHVGKWESKDSRNLFYSFHRDEVFAE 171
Query: 163 SLLHPCKVAFLRKGVELPAGIS--SFVCRRVYDIDNKCLWWLTDQDYINERQEEVNRLLH 220
S+ H C V F+ + ++P F+ + VYD K + TD+++ ++ E++RL+
Sbjct: 172 SVKHKCVVNFVPENKQIPNRREHPCFIVQNVYDFVKKKVRKFTDKNFDVHQKNEIDRLVA 231
Query: 221 RTKLEM 226
+T L +
Sbjct: 232 KTSLRL 237
>AT4G23120.1 | chr4:12113308-12115523 FORWARD LENGTH=361
Length = 360
Score = 61.6 bits (148), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 106 PFIGLIRWI-EKKEEGFPKLRVSWLYRPADI-KLNKGTQLCAAPNEIFYSFHQDETSAVS 163
P++ +I+ I +++EG KL V WLYRP ++ K G ++FYSFH+DE A S
Sbjct: 75 PYVAIIKDIYTQRKEGHVKLEVQWLYRPEEVEKKYVGNWKSKGSRDLFYSFHRDEVFAES 134
Query: 164 LLHPCKVAFLRKGVELP--AGISSFVCRRVYDIDNKCLWWLTDQDYINERQEEVNRLLHR 221
+ C V F+++ ++P F+ + VYD K L LT + +++ E++ + +
Sbjct: 135 VKDDCIVHFVQENKQIPNRRKHPGFIVQHVYDNVKKKLRKLTFNGFDLQQKREIDHFVEK 194
Query: 222 TKLEM 226
T L +
Sbjct: 195 TILRI 199
>AT3G43990.1 | chr3:15782538-15785178 REVERSE LENGTH=381
Length = 380
Score = 61.2 bits (147), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 82 DSFLKDGREFRVGDCALF--QAVEVPPFIGLIRWIEKKE-EGFPKLRVSWLYRPADIKLN 138
++F G+++R+ D L + + +I +I+ I +E +G K+ V W YR DI+
Sbjct: 75 ETFEFHGKQYRLKDFVLLYPEDNKQKEYIAIIKDIYSQEKDGLVKMEVQWFYRREDIEEK 134
Query: 139 K-GTQLCAAPNEIFYSFHQDETSAVSLLHPCKVAFLRKGVELPAGI--SSFVCRRVYDID 195
G P EIF+SFH DE A S+ + C V F+ ++P I S F+ + VYD
Sbjct: 135 HFGKWKTENPREIFFSFHCDEVFAESVKYKCLVYFVPDDKQIPNRIHHSGFIVQMVYDNV 194
Query: 196 NKCLWWLTDQDYINERQEEVNRLLHRT 222
K + + + + E++ E++ L+ +T
Sbjct: 195 RKKVRKFSHEGFEEEQKFEIDMLVAKT 221
>AT4G24200.1 | chr4:12556927-12559929 REVERSE LENGTH=1001
Length = 1000
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 299 LKSEITKITEKGGLPHAEAVEKLVHLMQLDRTERKIDLPGRVI-----LADIIAATESPD 353
L+ T K GL VE+LV +MQ ++ + + G +A IAAT++ D
Sbjct: 3 LEDFFTLTEIKDGLTVTSRVEELVSVMQSNK-DSVLKNSGDAFRQWTAVASTIAATKNRD 61
Query: 354 CLGRFVQLRGLPVFDDWLQEAHKGKSGEAGSPKETDKPMEDXXXXXXXXXXXXPINLTAL 413
CL FV L GL WL EA + D+ +E+ ++ + L
Sbjct: 62 CLDVFVNLDGLVYLSSWLAEAQMLDN------DSVDRSVEESILALLEAVENLGVDSSKL 115
Query: 414 QSCSIGKSVNHLRSHKNPEIQKKAKCLVENWKKRVDAEMKSND 456
S + +V L H + +Q +A+ L +WK + D + +D
Sbjct: 116 VSSGLWVAVKKLVDHGSSRVQDQARKLFGSWKDKDDYDHSEHD 158
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.310 0.128 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 34,258,593
Number of extensions: 1486749
Number of successful extensions: 3865
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 3843
Number of HSP's successfully gapped: 11
Length of query: 1671
Length of database: 11,106,569
Length adjustment: 112
Effective length of query: 1559
Effective length of database: 8,035,977
Effective search space: 12528088143
Effective search space used: 12528088143
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 119 (50.4 bits)