BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0741300 Os02g0741300|AK120667
(585 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27520.1 | chr1:9558752-9562091 FORWARD LENGTH=575 807 0.0
AT5G43710.1 | chr5:17552252-17556523 REVERSE LENGTH=625 382 e-106
AT1G51590.1 | chr1:19128315-19132132 REVERSE LENGTH=561 163 3e-40
AT3G21160.1 | chr3:7414129-7418328 REVERSE LENGTH=573 159 4e-39
AT1G30000.1 | chr1:10509532-10512320 REVERSE LENGTH=625 90 3e-18
>AT1G27520.1 | chr1:9558752-9562091 FORWARD LENGTH=575
Length = 574
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/535 (71%), Positives = 442/535 (82%), Gaps = 1/535 (0%)
Query: 48 MRNKVLEMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPNDYNGSAXXXX 107
MR KV EMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNL LEHLP DYNGSA
Sbjct: 37 MREKVREMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLKLEHLPTDYNGSAVTLV 96
Query: 108 XXXXXXXXXGNLTEFERGVLWLSENLTFDVDARINLFECNIRLLGGLISGHILAKEHSSH 167
GN TEFE+GVLWLSENLTFD+DAR+NLFECNIR+LGGLIS H+LA + ++
Sbjct: 97 ESLSSLAILGNSTEFEKGVLWLSENLTFDIDARVNLFECNIRVLGGLISAHLLAIDPNNR 156
Query: 168 LKDGPYQDQLLHLAENLGSRFLPAFETPTGLPYAWINLKYGVMENXXXXXXXXGCGSLIL 227
L G Y +QLL LAE+LG RFLPAFETPTGLPYAWINLK GVMEN GCGSL+L
Sbjct: 157 LIQGSYNNQLLRLAEDLGKRFLPAFETPTGLPYAWINLKNGVMENETTETSTSGCGSLVL 216
Query: 228 EMGALSRLTGDSRYEAAALRALRKLWSMRSSLNLVGTTLDVLTGKWIEYSSGIGAGVDSF 287
EMGALSRLTGD R+E+AALRALR+LW MRSSL+L+GTTLDV+TG+WIEYSS IGAGVDSF
Sbjct: 217 EMGALSRLTGDPRFESAALRALRQLWRMRSSLDLLGTTLDVVTGEWIEYSSSIGAGVDSF 276
Query: 288 YEYLIKAYVLFGSEEYWDMFHSAYLAVQKYFRHGPWYHEADMRTGEATHWQLTSLQAFWP 347
YEYL+KAY+LFG E+YW MFHSAYLA QKYFRHGPWYHEA+M +G+ T+WQLTSLQAFWP
Sbjct: 277 YEYLLKAYILFGKEDYWRMFHSAYLASQKYFRHGPWYHEANMWSGKPTYWQLTSLQAFWP 336
Query: 348 GLQTLLGDVAAANISHREFYNVWQRFGVLPERYLLDFGMLHPTEKYYPLRPEFAESTFYL 407
GLQ L+GD+AAAN SHREF++VW++FGVLPERYLLD ++HPT KYYPLRPE AESTFYL
Sbjct: 337 GLQVLVGDIAAANSSHREFFHVWEKFGVLPERYLLDHQIIHPTMKYYPLRPELAESTFYL 396
Query: 408 YQATKDPWYLEVGEAIIGSLNYYTKVDGGFASVRDVSTMKLEDHQHSFFLSETCKYLFLL 467
YQATKDPWYL+VGE+++ SLN YTKV GGFASVRDV+TM+LEDHQHSFFL+ETCKYL+LL
Sbjct: 397 YQATKDPWYLDVGESMVKSLNLYTKVPGGFASVRDVTTMQLEDHQHSFFLAETCKYLYLL 456
Query: 468 YDDSFLRNQNYIFTTEGHPLPIRSTWHEIIPTTHVPSNWTFVKDDSQPFRVSALSSQVCP 527
+DDSF+ +NYIFTTEGHP+ + S+WHE +P T+ NWT K + R SALS QVCP
Sbjct: 457 FDDSFVAKRNYIFTTEGHPIQVVSSWHEKLPETYFSGNWTLSKSGAWESRASALSLQVCP 516
Query: 528 -ETIFRQSVGSPWESACHVPDVLPTHRCRTDDDCGVEAVSCRRRTCSMAGYCGLW 581
++ + ESACHV D H+C ++ +CGV+A +CR RTCS GYCGLW
Sbjct: 517 LISLNSRHPEQQRESACHVLDEQINHKCWSNKECGVDATTCRLRTCSGVGYCGLW 571
>AT5G43710.1 | chr5:17552252-17556523 REVERSE LENGTH=625
Length = 624
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/449 (43%), Positives = 272/449 (60%), Gaps = 22/449 (4%)
Query: 48 MRNKVLEMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPNDYNGSAXXXX 107
+R++V MFYHA+D YM AFP DEL+PL+ D+L G A
Sbjct: 40 LRDEVRGMFYHAFDGYMNNAFPLDELRPLSCQGEDTL---------------GGYALTLI 84
Query: 108 XXXXXXXXXGNLTEFERGVLWLSENLTFDVDARINLFECNIRLLGGLISGHILAKEHSSH 167
G+ F V W+ +NL F+++ +++FE IR+LGGL+S H++A ++++
Sbjct: 85 DSLDTLALLGDRERFTSSVEWIGKNLQFNINKTVSVFETTIRVLGGLLSAHLIASDYATG 144
Query: 168 LKDGPYQDQLLHLAENLGSRFLPAFETPTGLPYAWINLKYGVMENXXXXXXXXGCGSLIL 227
++ Y ++LL LAENL R LPAF+TPTG+P+ +NL YGV ++ G G+L L
Sbjct: 145 MRIPSYNNELLVLAENLARRMLPAFDTPTGIPFGSVNLMYGVDKHESKITSTAGGGTLSL 204
Query: 228 EMGALSRLTGDSRYEAAALRALRKLWSMRSSLNLVGTTLDVLTGKWIEYSSGIGAGVDSF 287
E G LSRLT D +E A A+R LW+ RS+L+LVG ++V TG+W + +GIG +DSF
Sbjct: 205 EFGVLSRLTNDPVFEQVAKNAVRGLWARRSNLDLVGAHINVFTGEWTQKDAGIGTSIDSF 264
Query: 288 YEYLIKAYVLFGSEEYWDMFHSAYLAVQKYFRHGPWYHEADMRTGEATHWQLTSLQAFWP 347
YEYL+KAY+LFG EEY +F AY + +Y PWY E +M + SLQAFWP
Sbjct: 265 YEYLLKAYILFGDEEYLYIFQEAYRSAMQYLHKDPWYVEVNMDSAAIVWPVFNSLQAFWP 324
Query: 348 GLQTLLGDVAAANISHREFYNVWQRFGVLPERYLLDFGMLHPTEKYYPLRPEFAESTFYL 407
GLQ L GDV A +H F++VW+R+G PE + L + +K YPLRPE EST++L
Sbjct: 325 GLQVLAGDVDPAIRTHTAFFSVWKRYGFTPEGFNLATLSVQYGQKSYPLRPELIESTYWL 384
Query: 408 YQATKDPWYLEVGEAIIGSLNYYTKVDGGFASVRDVSTMKLEDHQHSFFLSETCKYLFLL 467
Y+AT+DP YL+ G + SL Y K G+ + DV K EDH SFFL+ET KYL+LL
Sbjct: 385 YKATRDPRYLDAGRDFVASLQYGAKCPCGYCHITDVELHKQEDHMESFFLAETVKYLWLL 444
Query: 468 YD-----DSFLRNQ--NYIFTTEGHPLPI 489
+D D+ + N YIF+TEGH LPI
Sbjct: 445 FDLAVDSDNLVDNGPYKYIFSTEGHLLPI 473
>AT1G51590.1 | chr1:19128315-19132132 REVERSE LENGTH=561
Length = 560
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 210/467 (44%), Gaps = 54/467 (11%)
Query: 49 RNKVLEMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPNDYNGSAXXXXX 108
R KV E HA+ +Y YA+ DEL+P TK TDS LG ++ L Y
Sbjct: 98 RQKVKEAMIHAWSSYEKYAWGKDELQPRTKDGTDSFGGLGATMVDSLDTLY--------- 148
Query: 109 XXXXXXXXGNLTEFERGVLWLSENLTFDVDARINLFECNIRLLGGLISGHILAKEHSSHL 168
G +F++ W++ +L FD D ++FE IR++GGL+S + L+ +
Sbjct: 149 ------IMGLDEQFQKAREWVASSLDFDKDYDASMFETTIRVVGGLLSAYDLSGDK---- 198
Query: 169 KDGPYQDQLLHLAENLGSRFLPAFETPTGLPYAWINLKYGVMEN----XXXXXXXXGCGS 224
L A+++ R LPA+ TPTG+PY INL+ G N G+
Sbjct: 199 -------MFLEKAKDIADRLLPAWNTPTGIPYNIINLRNGNAHNPSWAAGGDSILADSGT 251
Query: 225 LILEMGALSRLTGDSRYEAAALRALRKLWSMRSSLNLVGTTLDVLTGKWIEYSSGIGAGV 284
LE ALS+ TGD +Y+ + + +L + L+ ++ ++ GA
Sbjct: 252 EQLEFIALSQRTGDPKYQQKVEKVITELNKNFPADGLLPIYINPDNANPSYSTTTFGAMG 311
Query: 285 DSFYEYLIKAYVLFGS-------EEYWDMFHSAYLAVQKYFRHGPWYHEADMRTGEATHW 337
DSFYEYL+K +V + W+ L++ K + + + + G
Sbjct: 312 DSFYEYLLKVWVQGNKTSAVKPYRDMWEKSMKGLLSLVKKSTPSSFTYICE-KNGNNLID 370
Query: 338 QLTSLQAFWPGLQTLLGDVAAANISHREF-----------YNVWQRF--GVLPERYLLDF 384
++ L F PG+ L G ++F YN +Q + E Y
Sbjct: 371 KMDELACFAPGMLAL-GASGYGPDEEKKFLSLAGELAWTCYNFYQSTPTKLAGENYFFTA 429
Query: 385 GM-LHPTEKYYPLRPEFAESTFYLYQATKDPWYLEVGEAIIGSLNYYTKVDGGFASVRDV 443
G + + LRPE ES FYL++ T + Y E G I + ++V+ G+ ++DV
Sbjct: 430 GQDMSVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFQAFEKNSRVESGYVGLKDV 489
Query: 444 STMKLEDHQHSFFLSETCKYLFLLYD-DSFLRNQNYIFTTEGHPLPI 489
+T ++ SFFL+ET KYL+LL+ S + ++F TE HPL I
Sbjct: 490 NTGAKDNKMQSFFLAETLKYLYLLFSPSSVISLDEWVFNTEAHPLKI 536
>AT3G21160.1 | chr3:7414129-7418328 REVERSE LENGTH=573
Length = 572
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 218/467 (46%), Gaps = 54/467 (11%)
Query: 51 KVLEMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPNDYNGSAXXXXXXX 110
+V E HA+ +Y YA+ DEL+P TK DS LG ++ L Y
Sbjct: 101 RVKEAMVHAWSSYEKYAWGQDELQPQTKDGVDSFGGLGATMIDALDTLY----------- 149
Query: 111 XXXXXXGNLTEFERGVLWLSENLTFDVDARINLFECNIRLLGGLISGHILAKEHSSHLKD 170
G +F++ W++ +L FD D ++FE IR++GGL+S + L+ +
Sbjct: 150 ----IMGLDEQFQKAREWVASSLDFDKDYAASMFETTIRVVGGLLSAYDLSGDKI----- 200
Query: 171 GPYQDQLLHLAENLGSRFLPAFETPTGLPYAWINLKYGVMEN---XXXXXXXXGCGSLIL 227
L A ++ R LPA++T +G+PY INLK+G N G+ L
Sbjct: 201 ------FLEKAMDIADRLLPAWDTQSGIPYNIINLKHGNAHNPTWAGGDSILADSGTEQL 254
Query: 228 EMGALSRLTGDSRYEAAALRALRKLWSMRSSLNLVGTTLDVLTGKWIEYSSGIGAGVDSF 287
E ALS+ TGD +Y+ + + L + L+ ++ T + + GA DSF
Sbjct: 255 EFIALSQRTGDPKYQQKVEKVISVLNKNFPADGLLPIYINPDTANPSQSTITFGAMGDSF 314
Query: 288 YEYLIKAYVLFGSE--------EYWDMFHSAYLAVQKYFRHGPWYHEADMRTGEATHWQL 339
YEYL+K +V FG++ + W+ + L++ K + + + ++G + ++
Sbjct: 315 YEYLLKVWV-FGNKTSAVKHYRDMWEKSMNGLLSLVKKSTPLSFTYICE-KSGNSLIDKM 372
Query: 340 TSLQAFWPGLQTLLGDVAAANISHREF-----------YNVWQRF--GVLPERYLLDFGM 386
L F PG+ L + ++F YN +Q + E Y + G
Sbjct: 373 DELACFAPGMLALGASGYSDPAEGKKFLTLAEELAWTCYNFYQSTPTKLAGENYFFNSGS 432
Query: 387 -LHPTEKYYPLRPEFAESTFYLYQATKDPWYLEVGEAIIGSLNYYTKVDGGFASVRDVST 445
+ + LRPE ES FYL++ T + Y E G I + ++++ G+ ++DV+T
Sbjct: 433 DMSVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFEAFEKNSRIESGYVGLKDVNT 492
Query: 446 MKLEDHQHSFFLSETCKYLFLLYD-DSFLRNQNYIFTTEGHPLPIRS 491
++ SFFL+ET KYL+LL+ + + ++F TE HPL I+S
Sbjct: 493 GVKDNKMQSFFLAETLKYLYLLFSPTTVIPLDEWVFNTEAHPLKIKS 539
>AT1G30000.1 | chr1:10509532-10512320 REVERSE LENGTH=625
Length = 624
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 49 RNKVLEMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLNLEHLPNDYNGSAXXXXX 108
+ V E F HA+ Y YA +DEL P+++ D L LG ++ L
Sbjct: 129 QQSVKEAFDHAWSGYRKYAMGYDELMPISQKGVDGLGGLGATVVDALDT----------- 177
Query: 109 XXXXXXXXGNLTEFERGVLWLSENLTFDVDAR--INLFECNIRLLGGLISG-HILAKEHS 165
N+ E G W+ +L + + +NLFE IR+LGGL+S H+ E
Sbjct: 178 --AMIMGLDNIVS-EAGS-WVETHLLERISQKGQVNLFETTIRVLGGLLSAYHLSGGEQG 233
Query: 166 S----HLKDGPYQDQLLHLAENLGSRFLPAF-ETPTGLPYAWINLKYGVMENXXXXXXXX 220
+ H+ GP L++A++L R L AF +PT +P+ + L
Sbjct: 234 TVNMTHV--GPKPVIYLNIAKDLADRLLSAFTSSPTPVPFCDVILHESTAHPAPGGASST 291
Query: 221 G-CGSLILEMGALSRLTGDSRYEAAALRALRKLWSMRSSLNLVGTTLDVLTGKWIEYSSG 279
S+ LE LS ++GD +Y A++ L + ++ + LV + TG ++ +
Sbjct: 292 AEVASVQLEFNYLSSISGDPKYSTEAMKVLAHIKTLPKTEGLVPIYISPQTGDFVGENIR 351
Query: 280 IGAGVDSFYEYLIKAYVLFGSE--EYWDMFHSAYLAVQKYFRH 320
+G+ DS+YEYLIK ++ G++ + H Y+ K RH
Sbjct: 352 LGSRGDSYYEYLIKVWLQQGAKLNSNFTYLHDMYIEAMKGVRH 394
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 386 MLHPTEKYYPLRPEFAESTFYLYQATKDPWYLEVGEAIIGSLNYYTKV-DGGFASVRDVS 444
++ P +++ LRPE ES F LY+ TKD Y + G I + YTKV GG+ S+ DV+
Sbjct: 513 IIKPADRHNLLRPETVESLFVLYRITKDTKYRDQGWQIFEAFEKYTKVKSGGYTSLDDVT 572
Query: 445 TMK--LEDHQHSFFLSETCKYLFLLY-DDSFLRNQNYIFTTEGHPLPIR 490
+ D +FFL ET KYL+LL+ DDS + ++F TE HPLPIR
Sbjct: 573 EVPPHRRDKMETFFLGETLKYLYLLFGDDSVIPLDKFVFNTEAHPLPIR 621
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,162,783
Number of extensions: 519963
Number of successful extensions: 929
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 907
Number of HSP's successfully gapped: 6
Length of query: 585
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 481
Effective length of database: 8,255,305
Effective search space: 3970801705
Effective search space used: 3970801705
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)