BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0734400 Os02g0734400|J013041K06
(173 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G70670.1 | chr1:26644830-26645970 FORWARD LENGTH=196 128 2e-30
AT1G70680.1 | chr1:26647341-26648541 FORWARD LENGTH=193 120 4e-28
AT1G23240.1 | chr1:8252894-8254494 REVERSE LENGTH=211 111 2e-25
AT4G26740.1 | chr4:13473791-13475278 REVERSE LENGTH=246 110 5e-25
AT5G55240.1 | chr5:22405963-22407158 FORWARD LENGTH=244 105 9e-24
AT2G33380.1 | chr2:14144984-14146374 REVERSE LENGTH=237 100 6e-22
AT1G23250.1 | chr1:8255233-8256770 REVERSE LENGTH=206 95 2e-20
AT5G29560.1 | chr5:11190543-11191963 REVERSE LENGTH=221 84 5e-17
>AT1G70670.1 | chr1:26644830-26645970 FORWARD LENGTH=196
Length = 195
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 78/116 (67%)
Query: 57 FSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAELDEMLRANRE 116
F I ++NIH HGSD+G +D +GRFV KF+EIFTKHA T D LT EL ++L+AN+E
Sbjct: 78 FPIEVKNIHLAKHGSDSGVYDKDGRFVASKFEEIFTKHAHTHRDALTNEELKQLLKANKE 137
Query: 117 PKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKVASKKKGPSANQ 172
P D KGW+ TEW+ L KDK+G L KDTVR YDGS F K+ ++ ++ +
Sbjct: 138 PNDRKGWLAGYTEWKVLHYLCKDKNGLLHKDTVRAAYDGSLFEKLEKQRSSKTSKK 193
>AT1G70680.1 | chr1:26647341-26648541 FORWARD LENGTH=193
Length = 192
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 74/109 (67%)
Query: 57 FSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAELDEMLRANRE 116
F I ++N+ G+H SD+G +D +GRFV KF+EIF KHA T D LT+ EL E+L+ANRE
Sbjct: 79 FPIEVKNVRLGIHSSDSGVYDKDGRFVASKFEEIFAKHAHTHRDALTSKELKELLKANRE 138
Query: 117 PKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKVASKK 165
P D KG + A EW+ + L KDK G L K+ VR VYDGS F ++ ++
Sbjct: 139 PNDCKGGILAFGEWKVLYNLCKDKSGLLHKEIVRAVYDGSLFEQLEKQR 187
>AT1G23240.1 | chr1:8252894-8254494 REVERSE LENGTH=211
Length = 210
Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 57 FSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAELDEMLRANRE 116
F I ++N H +HGSDT +D +GRFV KF+EIF KHA+T D LTA E+ +ML+ NR+
Sbjct: 89 FPIDVKNSHLCMHGSDTDVYDDDGRFVESKFEEIFNKHARTHKDALTAEEIQKMLKTNRD 148
Query: 117 PKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKV 161
P D GW+ EW+ L +DK+G L + +VR +YDGS F ++
Sbjct: 149 PFDITGWLSDYGEWKILHTLAQDKNGLLSEKSVRAIYDGSLFHQL 193
>AT4G26740.1 | chr4:13473791-13475278 REVERSE LENGTH=246
Length = 245
Score = 110 bits (274), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 71/116 (61%)
Query: 57 FSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAELDEMLRANRE 116
F IYI NIHK HGSD+ +D+EGRF+ + IF+K+AKT+PD L+ EL EM NR+
Sbjct: 126 FPIYIHNIHKSKHGSDSKTYDNEGRFMPVNLELIFSKYAKTLPDKLSLGELWEMTEGNRD 185
Query: 117 PKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKVASKKKGPSANQ 172
D GW+ EW + L +D++GFL K+ +R +DGS F A G S ++
Sbjct: 186 AWDIFGWIAGKIEWGLLYLLARDEEGFLSKEAIRRCFDGSLFEYCAKIYAGISEDK 241
>AT5G55240.1 | chr5:22405963-22407158 FORWARD LENGTH=244
Length = 243
Score = 105 bits (263), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 67/106 (63%)
Query: 57 FSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAELDEMLRANRE 116
F IYI NIHK HGSD+ +D+EGR+ + +F+K+A+T+PD L+ EL +M NR+
Sbjct: 125 FPIYIHNIHKAKHGSDSKTYDNEGRYTPANLELMFSKYARTIPDKLSLGELWDMTEGNRD 184
Query: 117 PKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKVA 162
D+ GW+ + EW + L D++GFL K+ +R +DGS F A
Sbjct: 185 AFDFFGWLASKVEWGVLYALASDEEGFLSKEAIRRCFDGSLFEYCA 230
>AT2G33380.1 | chr2:14144984-14146374 REVERSE LENGTH=237
Length = 236
Score = 100 bits (248), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 67/109 (61%)
Query: 57 FSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAELDEMLRANRE 116
+YI+NIHK HGSD+ +D+EGR+V + IF+K+A TV D L+ E+ + NR
Sbjct: 121 LPVYIDNIHKAKHGSDSSTYDTEGRYVPVNLENIFSKYALTVKDKLSFKEVWNVTEGNRM 180
Query: 117 PKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKVASKK 165
D GW+ EW + L KD+DGFL K+ VR +DGS F ++A ++
Sbjct: 181 AIDPFGWLSNKVEWILLYILAKDEDGFLSKEAVRGCFDGSLFEQIAKER 229
>AT1G23250.1 | chr1:8255233-8256770 REVERSE LENGTH=206
Length = 205
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 73 TGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAELDEMLRANREPKDYKGWVGASTEWET 132
T +D +GRFV KF+EIF KHA+T D LTA E+ +ML+ NREP D+ GW+ EW+
Sbjct: 101 TDVYDKDGRFVESKFEEIFNKHARTHKDALTAKEIKQMLKTNREPYDFIGWLSDFIEWKI 160
Query: 133 TFKLGKDKDGFLRKDTVRTVYDGSFFSKV 161
L +D +G L +D VR VYDGS F ++
Sbjct: 161 LHTLAQD-NGLLTEDAVRGVYDGSLFQQL 188
>AT5G29560.1 | chr5:11190543-11191963 REVERSE LENGTH=221
Length = 220
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 19/109 (17%)
Query: 57 FSIYIENIHKGVHGSDTGAFDSEGRFVNEKFDEIFTKHAKTVPDGLTAAELDEMLRANRE 116
F IYI+NIH+ HGSDT +D+EGR++ + +F+K+A+TVPD LT A
Sbjct: 124 FPIYIKNIHRAKHGSDTSTYDTEGRYIPANLENMFSKYARTVPDKLTLA----------- 172
Query: 117 PKDYKGWVGASTEWETTFKLGKDKDGFLRKDTVRTVYDGSFFSKVASKK 165
+ EW + L KD++G L K+ VR +DGS F A +
Sbjct: 173 --------ASKMEWGVLYFLAKDENGHLSKEAVRRCFDGSLFDYCAKAR 213
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,991,651
Number of extensions: 157786
Number of successful extensions: 358
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 357
Number of HSP's successfully gapped: 8
Length of query: 173
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 81
Effective length of database: 8,584,297
Effective search space: 695328057
Effective search space used: 695328057
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 108 (46.2 bits)