BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0732900 Os02g0732900|AK065796
(449 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G57930.2 | chr5:23454690-23456354 FORWARD LENGTH=444 455 e-128
AT1G64810.2 | chr1:24086810-24088276 FORWARD LENGTH=461 320 9e-88
AT5G61930.1 | chr5:24866230-24867665 REVERSE LENGTH=403 250 1e-66
AT3G21740.1 | chr3:7662542-7663638 REVERSE LENGTH=338 186 2e-47
>AT5G57930.2 | chr5:23454690-23456354 FORWARD LENGTH=444
Length = 443
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/370 (61%), Positives = 286/370 (77%), Gaps = 1/370 (0%)
Query: 81 IIITNEHVQNADFPPNYSKREKKPFPIPVLXXXXXXXXXXXXXXXXXXXSLPPPKNGMLI 140
+++ N+ QN D P Y++REKKPFP+P++ LPPPKNGM++
Sbjct: 74 LVVRNDRPQNEDLPKQYTRREKKPFPVPIVDLRRAARERVKNNKDKPKRPLPPPKNGMVV 133
Query: 141 KRLIPVAYKVYNARILLINNLKRLMKVIPVKGCKHCSEIHVGSVGHPFRTCKGMSSDKRR 200
K L+P+AYKVYNARI LINNL RLMKV+ V C C+EIHVG GHPF++CKG ++ +R+
Sbjct: 134 KSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPNTSQRK 193
Query: 201 GQHDWGGTLVEAVFVPVEAYHLEDRLGKRIPHDQRFAVPRIPALVELCIQAGVNLPEYPT 260
G H+W +++E V VP+EAYHL DRLGKRI HD+RF++PR+PA+VELCIQ GV +PE+P
Sbjct: 194 GLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEIPEFPA 253
Query: 261 XXXXXXXXXXGKNEFVDANEDDLPDPEPYKLEHPILEELNDNEIIAPASPEEIVALAEET 320
GK+EFVDA+E +LPDPEP P+L EL +EI P+S EE V+LAEET
Sbjct: 254 KRRRKPIIRIGKSEFVDADETELPDPEPQPPPVPLLTELPVSEITPPSSEEETVSLAEET 313
Query: 321 LEAWEVVRDGALKLMKGYAVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVL 380
L+AWE +R GA KLM+ Y VRVCGYCPEVH+G +GHKA+NCGAFKHQQRNGQHGWQ+AVL
Sbjct: 314 LQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHGWQSAVL 373
Query: 381 DDLIPPRYVWHLPE-SGEDLQRDLKSFYGQAPAIVEICVQAGAKVPEKYKATMRLDIGIP 439
DDLIPPRYVWH+P+ +G +QR+L+SFYGQAPA+VEIC QAGA VPE Y+ATMRL++GIP
Sbjct: 374 DDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMRLEVGIP 433
Query: 440 TSLREAEMVV 449
+S++EAEMVV
Sbjct: 434 SSVKEAEMVV 443
>AT1G64810.2 | chr1:24086810-24088276 FORWARD LENGTH=461
Length = 460
Score = 320 bits (820), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 163/366 (44%), Positives = 220/366 (60%), Gaps = 6/366 (1%)
Query: 88 VQNADFPPNYSKREKKPFPIPVLXXXXXXXXXXXXXXXXXXXSLPPPKNGMLIKRLIPVA 147
QN D PP K +KKP+PIP L PPKNG+L+ L+PVA
Sbjct: 95 TQNVDLPPILPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQLDPPKNGLLVPNLVPVA 154
Query: 148 YKVYNARILLINNLKRLMKVIPVKGCKHCSEIHVGSVGHPFRTCKGMSSDKRRGQHDWGG 207
+V + LLI L +L+ V+PV C C +HV +VGH R C G ++ +RRG H W
Sbjct: 155 DQVIDNWKLLIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVK 214
Query: 208 TLVEAVFVPVEAYHLEDRLGKRIPHDQRFAVPRIPALVELCIQAGVNLPEYPTXXXXXXX 267
+ V +PVE+YH+ D G+RI H+ RF RIPALVELCIQAGV +PEYP
Sbjct: 215 GTINDVLIPVESYHMYDPFGRRIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPI 274
Query: 268 XXXGKNEFVDANEDDLPDP--EPYKLEHPI--LEELNDNEIIAPASPEEIVALAEETLEA 323
GK P+ L P+ L+ L E P +PE+I +A+ET++A
Sbjct: 275 RMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAELDTLGVFERYPPPTPEDIPKIAQETMDA 334
Query: 324 WEVVRDGALKLMKGYAVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDL 383
+E VR G KLM+ + V+ CGYC EVH+G GH + CG FKHQ R+G+HGWQ A++D++
Sbjct: 335 YEKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRDGKHGWQDALVDEV 394
Query: 384 IPPRYVWHLPE-SGEDLQRDLKSFYGQAPAIVEICVQAGAKVPEKYKATMRLDIGIPTSL 442
PP YVWH+ + G L +L+ FYG+APA+VEIC+ +GA+VP++YKA MRLDI +P S
Sbjct: 395 FPPNYVWHVRDLKGNPLTGNLRRFYGKAPALVEICMHSGARVPQRYKAMMRLDIIVPDS- 453
Query: 443 REAEMV 448
+EA+MV
Sbjct: 454 QEADMV 459
>AT5G61930.1 | chr5:24866230-24867665 REVERSE LENGTH=403
Length = 402
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/354 (38%), Positives = 195/354 (55%), Gaps = 9/354 (2%)
Query: 91 ADFP-PNYSKREKKPFPIPVLXXXXXXXXXXXXXXXXXXXSL-PPPKNGMLIKRLIPVAY 148
AD P P K E+KP+P P+ L PP NG+L+ L+ VA+
Sbjct: 44 ADVPKPPKDKSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPELVDVAH 103
Query: 149 KVYNARILLINNLKRLMKVIPVKGCKHCSEIHVGSVGHPFRTCKGMSSDKRRGQHDWGGT 208
V+ R +L++ L +++ +PV C+ C+E+H+G GH RTC G S R H W
Sbjct: 104 CVHRCRNMLLSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATHVWKRG 163
Query: 209 LVEAVFVPVEAYHLEDRLGK-RIPHDQRFAVPRIPALVELCIQAGVNLPEYPTXXXXXXX 267
V V + + +HL DR K R+ HD+RF VP+I A++ELCIQAGV+L ++P+
Sbjct: 164 RVSDVVLFPKCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKRRSKPV 223
Query: 268 XXXGKNEFVDANEDDLPDPEPYKLEHPILEELNDNEIIAPASPEEIVALAEETLEAWEVV 327
+ VD + + + E L + +D + + L+ ET+E+W +
Sbjct: 224 YSI-EGRIVDFEDVNDGNSELAVTSTTTLIQEDDR---CKEEKKSLKELSFETMESWFEM 279
Query: 328 RDGALKLMKGYAVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAVLDDLIPPR 387
G KLM+ Y V CGYCPE+ +G GHK R C A KHQ R+G H WQ A +DD++ P
Sbjct: 280 VLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDVVGPT 339
Query: 388 YVWHL--PESGEDLQRDLKSFYGQAPAIVEICVQAGAKVPEKYKATMRLDIGIP 439
YVWH+ P G L LK FYG+APA++E+CVQ GA VP++Y + MRLD+ P
Sbjct: 340 YVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYP 393
>AT3G21740.1 | chr3:7662542-7663638 REVERSE LENGTH=338
Length = 337
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 153/295 (51%), Gaps = 30/295 (10%)
Query: 140 IKRLIPVAYKVYNARILLINNLKRLMKVIPVKGCKHCSEIHVGSVGHPFRTCKGMSSDKR 199
+K ++PVA ++ AR LI+N+ L+KV PV CK CSE+ VG GH TC+
Sbjct: 55 VKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSEVFVGKEGHLIETCRSYIRRGN 114
Query: 200 RGQHDWGGTLVEAVFVPVEAYHLEDRLGKRIPHDQRFAVPRIPALVELCIQAGVNLPEYP 259
H+W + + VPVE+YHL + I H +RF R+PA++ELC QAG PE
Sbjct: 115 NRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDYDRVPAILELCCQAGAIHPE-- 172
Query: 260 TXXXXXXXXXXGKNEFVDANEDDLPDPEPYKLEHPILEELNDNEIIAPASPEEIVALAEE 319
E + +E ++P + E E I ++ +
Sbjct: 173 --------------EILQYSEIH---------DNPQISE----EDIRSLPAGDLKYVGAN 205
Query: 320 TLEAWEVVRDGALKLMKGYAVRVCGYCPEVHIGASGHKARNCGAFKHQQRNGQHGWQAAV 379
L AWE VR G KL+ Y +VC C EVH+G SGHKAR CG FK++ G H W+ A
Sbjct: 206 ALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEKAG 265
Query: 380 LDDLIPPRYVWH-LPESGEDLQRDLKSFYGQAPAIVEICVQAGAKVPEKYKATMR 433
++DL+P + VWH P+ L + +S+YG APAIV +C GA VP KY M+
Sbjct: 266 VNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMK 320
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.138 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,867,601
Number of extensions: 413757
Number of successful extensions: 878
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 857
Number of HSP's successfully gapped: 7
Length of query: 449
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 347
Effective length of database: 8,310,137
Effective search space: 2883617539
Effective search space used: 2883617539
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)