BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0730500 Os02g0730500|AK070160
         (195 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G30495.2  | chr5:11380190-11381391 FORWARD LENGTH=197          204   3e-53
AT1G54770.1  | chr1:20434803-20435815 FORWARD LENGTH=190          189   8e-49

>AT5G30495.2 | chr5:11380190-11381391 FORWARD LENGTH=197
          Length = 196

 Score =  204 bits (518), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 107/199 (53%), Positives = 136/199 (68%), Gaps = 10/199 (5%)

Query: 1   MAEAAP-IGLSWAPKLPSLPTTSGGKKDTGASSSRAQG----SLWKPASELVDGLFVPPR 55
           MAE  P IGL+W PKLP L   S   K    SS R +     SLW   SELVDGL +PP 
Sbjct: 1   MAETKPLIGLTWEPKLPGL---SLDTKTCSTSSKRVESHESSSLWMSKSELVDGLCLPPN 57

Query: 56  DPRKANKLARKNVKDTSGKGWFDMPAPTITPELKKDLEILQLRHVMDPKRHFKRA-GKSK 114
           DP+K NK+ RK +KDT+G  WFDMPAPT+TPELK+DL++L+LR VMDP  H+K++  +SK
Sbjct: 58  DPKKINKMIRKQIKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPAVHYKKSVSRSK 117

Query: 115 ALPKYFQVGTVIEPASEFFSSRLTKRERKTTLVDELLSDQHLKNYRMRKVREIQESRTPG 174
              KYFQ+GTVIEPA EF+  RLTK+ RK TL DEL+SD  +  YR RKV+EI+E     
Sbjct: 118 LAEKYFQIGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKVSQYRKRKVKEIEEKSRAV 176

Query: 175 GSQKWRNKGKKTLKRAKDR 193
            ++KW+ KG +T  + + R
Sbjct: 177 TNKKWKKKGNQTTNKKQRR 195



>AT1G54770.1 | chr1:20434803-20435815 FORWARD LENGTH=190
          Length = 189

 Score =  189 bits (480), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 104/191 (54%), Positives = 129/191 (67%), Gaps = 14/191 (7%)

Query: 7   IGLSWAPKLP--SLPTTSGGKKDTGASSSRAQGSLWKPASELVDGLFVPPRDPRKANKLA 64
           IGL W PKLP  SL   +G  +   A SS+         SELVDGL +PP DPRK NK+ 
Sbjct: 9   IGLKWEPKLPGLSLDLKTGSTRSKTAESSK---------SELVDGLCLPPNDPRKINKMI 59

Query: 65  RKNVKDTSGKGWFDMPAPTITPELKKDLEILQLRHVMDPKRHFKRA-GKSKALPKYFQVG 123
           RK +KDT+G  WFDMPAPT+TPELK+DL++L+LR VMDP  H+K++  +SK   KYFQ+G
Sbjct: 60  RKQLKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPALHYKKSVSRSKLAEKYFQIG 119

Query: 124 TVIEPASEFFSSRLTKRERKTTLVDELLSDQHLKNYRMRKVREIQESRTPGGSQKWRNKG 183
           TVIEPA EF+  RLTK+ RK TL DEL+SD     YR RKVREI+E      ++KW  KG
Sbjct: 120 TVIEPAEEFY-GRLTKKNRKATLADELVSDPKTALYRKRKVREIEEKSRAVTNKKWNKKG 178

Query: 184 KKTLKRAKDRR 194
            ++ K  K RR
Sbjct: 179 NQS-KNTKPRR 188



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.313    0.130    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,536,458
Number of extensions: 190927
Number of successful extensions: 455
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 451
Number of HSP's successfully gapped: 2
Length of query: 195
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 102
Effective length of database: 8,556,881
Effective search space: 872801862
Effective search space used: 872801862
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 109 (46.6 bits)