BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0721200 Os02g0721200|Os02g0721200
(249 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G08690.1 | chr3:2641487-2642489 FORWARD LENGTH=149 100 7e-22
AT5G53300.1 | chr5:21632802-21633989 REVERSE LENGTH=149 96 2e-20
AT4G27960.2 | chr4:13916065-13917293 REVERSE LENGTH=179 94 7e-20
AT3G08700.1 | chr3:2643482-2644545 FORWARD LENGTH=150 92 3e-19
AT5G41700.4 | chr5:16676072-16677223 FORWARD LENGTH=150 90 9e-19
AT2G16740.1 | chr2:7267880-7268737 FORWARD LENGTH=149 90 9e-19
AT5G56150.1 | chr5:22729756-22730964 FORWARD LENGTH=149 89 2e-18
AT3G13550.1 | chr3:4423569-4424797 REVERSE LENGTH=183 88 5e-18
AT1G64230.4 | chr1:23833792-23835220 FORWARD LENGTH=191 73 1e-13
AT1G36340.1 | chr1:13683791-13684924 REVERSE LENGTH=155 59 3e-09
AT5G50870.2 | chr5:20699626-20700998 REVERSE LENGTH=204 58 4e-09
AT5G50430.1 | chr5:20534366-20536307 REVERSE LENGTH=244 58 4e-09
AT1G17280.1 | chr1:5917146-5919162 REVERSE LENGTH=238 57 8e-09
AT1G14400.1 | chr1:4927294-4928136 REVERSE LENGTH=153 55 5e-08
AT2G02760.1 | chr2:774271-775149 FORWARD LENGTH=153 55 5e-08
AT1G16890.3 | chr1:5776550-5778327 REVERSE LENGTH=163 52 2e-07
AT2G32790.1 | chr2:13905649-13906271 REVERSE LENGTH=178 52 4e-07
AT5G62540.1 | chr5:25104679-25105465 FORWARD LENGTH=151 51 5e-07
AT1G45050.1 | chr1:17031337-17032967 FORWARD LENGTH=162 50 1e-06
AT5G25760.1 | chr5:8967983-8969173 FORWARD LENGTH=158 49 2e-06
>AT3G08690.1 | chr3:2641487-2642489 FORWARD LENGTH=149
Length = 148
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 30/173 (17%)
Query: 36 AQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEY 95
A +RI +EL+DL DPP+ C GP D+ HW+ I GPP +PYAGG F V + +P +Y
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPV-AEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 96 PFQPPKLTFKTKV--KSLAQSLSRSLACVHRQISQLMLQSRTYECNSIAAGVPSEHXXXX 153
PF+PPK++FKTKV ++ + S L + Q S + S+
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVL----------------- 103
Query: 154 XXXXXXXXXXXXFVSILYDPLLDYPINDDIAEQYENEYELYEKEAREWTRRYS 206
S+L DP D P+ +IA Y+ + YE AR WT++Y+
Sbjct: 104 ----------LSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYA 146
>AT5G53300.1 | chr5:21632802-21633989 REVERSE LENGTH=149
Length = 148
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 84/173 (48%), Gaps = 30/173 (17%)
Query: 36 AQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEY 95
A +RI +EL+DL DPP C GP D+ HW+ I GP +PYAGG F V + +P +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPV-AEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 96 PFQPPKLTFKTKV--KSLAQSLSRSLACVHRQISQLMLQSRTYECNSIAAGVPSEHXXXX 153
PF+PPK+ F+TKV ++ + S L + Q S + S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL----------------- 103
Query: 154 XXXXXXXXXXXXFVSILYDPLLDYPINDDIAEQYENEYELYEKEAREWTRRYS 206
S+L DP D P+ +IA Y+ + YE AR WT++Y+
Sbjct: 104 ----------LSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYA 146
>AT4G27960.2 | chr4:13916065-13917293 REVERSE LENGTH=179
Length = 178
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 30/184 (16%)
Query: 25 RWWMKADPRKAAQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGT 84
W + + A +RI +EL+DL DPP C GP D+ HW+ I GP +PY+GG
Sbjct: 21 NWNLDRGILEMASKRILKELKDLQKDPPTSCSAGPV-AEDMFHWQATIMGPSDSPYSGGV 79
Query: 85 FPVDVWYPNEYPFQPPKLTFKTKVK--SLAQSLSRSLACVHRQISQLMLQSRTYECNSIA 142
F V + +P +YPF+PPK+ F+TKV ++ + S L + Q S + S+
Sbjct: 80 FLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL------ 133
Query: 143 AGVPSEHXXXXXXXXXXXXXXXXFVSILYDPLLDYPINDDIAEQYENEYELYEKEAREWT 202
S+L DP D P+ +IA Y+ + YE AR WT
Sbjct: 134 ---------------------LSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWT 172
Query: 203 RRYS 206
++Y+
Sbjct: 173 QKYA 176
>AT3G08700.1 | chr3:2643482-2644545 FORWARD LENGTH=150
Length = 149
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 83/173 (47%), Gaps = 29/173 (16%)
Query: 36 AQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEY 95
A +RISREL D+ PPA C GP D+ HW+ I GP +PY+GG F V + + ++Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 96 PFQPPKLTFKTKV--KSLAQSLSRSLACVHRQISQLMLQSRTYECNSIAAGVPSEHXXXX 153
PF+PPK+ FKTKV ++ S L + Q S S+
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVL----------------- 104
Query: 154 XXXXXXXXXXXXFVSILYDPLLDYPINDDIAEQYENEYELYEKEAREWTRRYS 206
S+L DP + P+ +IA Y+ + YE A++WT++Y+
Sbjct: 105 ----------LSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYA 147
>AT5G41700.4 | chr5:16676072-16677223 FORWARD LENGTH=150
Length = 149
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 29/173 (16%)
Query: 36 AQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEY 95
A +RI +EL+DL DPP C D+ HW+ I GP +PY+GG F V + +P +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 96 PFQPPKLTFKTKV--KSLAQSLSRSLACVHRQISQLMLQSRTYECNSIAAGVPSEHXXXX 153
PF+PPK+ F+TKV ++ + S L + Q S + S+
Sbjct: 62 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL----------------- 104
Query: 154 XXXXXXXXXXXXFVSILYDPLLDYPINDDIAEQYENEYELYEKEAREWTRRYS 206
S+L DP D P+ +IA Y+ + YE AR WT++Y+
Sbjct: 105 ----------LSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYA 147
>AT2G16740.1 | chr2:7267880-7268737 FORWARD LENGTH=149
Length = 148
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 30/173 (17%)
Query: 36 AQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEY 95
A RRI +EL++L DPP C GP D+ HW+ I GP +PY+GG F V++ +P +Y
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTG-EDMFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 96 PFQPPKLTFKTKV--KSLAQSLSRSLACVHRQISQLMLQSRTYECNSIAAGVPSEHXXXX 153
PF+PPK+ F+TKV ++ + + L + Q S + S+
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVL----------------- 103
Query: 154 XXXXXXXXXXXXFVSILYDPLLDYPINDDIAEQYENEYELYEKEAREWTRRYS 206
S+L DP D P+ +IA Y+ + YE AR WT++Y+
Sbjct: 104 ----------LSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYA 146
>AT5G56150.1 | chr5:22729756-22730964 FORWARD LENGTH=149
Length = 148
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 30/173 (17%)
Query: 36 AQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEY 95
A +RI++EL DL DPP C GP D+ W+ I GP +P+AGG F V + +P +Y
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTG-DDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 96 PFQPPKLTFKTKV--KSLAQSLSRSLACVHRQISQLMLQSRTYECNSIAAGVPSEHXXXX 153
PF+PPK+ F+TKV ++ + S L + Q S + S+
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVL----------------- 103
Query: 154 XXXXXXXXXXXXFVSILYDPLLDYPINDDIAEQYENEYELYEKEAREWTRRYS 206
S+L DP D P+ +IA Y+ + YE A+ WT++Y+
Sbjct: 104 ----------LSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYA 146
>AT3G13550.1 | chr3:4423569-4424797 REVERSE LENGTH=183
Length = 182
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 84/189 (44%), Gaps = 31/189 (16%)
Query: 20 STTARRWWMKADPRKAAQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTP 79
S TA W K A+ +RI RE+ +L +DPP C GP+ +L HW I GP GTP
Sbjct: 22 SGTASSWVAKTS-VSASGKRIQREMAELNIDPPPDCSAGPKG-DNLYHWIATIIGPSGTP 79
Query: 80 YAGGTFPVDVWYPNEYPFQPPKLTFKTKVKSLAQSLSRSLACVHRQISQLMLQSRTYECN 139
Y GG F +D+ +P++YPF+PPKL FKT++ Y CN
Sbjct: 80 YEGGIFFLDIIFPSDYPFKPPKLVFKTRI---------------------------YHCN 112
Query: 140 SIAAGVPSEHXXXX--XXXXXXXXXXXXFVSILYDPLLDYPINDDIAEQYENEYELYEKE 197
AG S + SI P P IA Y + E +++
Sbjct: 113 VDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEV 172
Query: 198 AREWTRRYS 206
A+EWT R++
Sbjct: 173 AKEWTLRFA 181
>AT1G64230.4 | chr1:23833792-23835220 FORWARD LENGTH=191
Length = 190
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 84/214 (39%), Gaps = 70/214 (32%)
Query: 36 AQRRISRELEDLWLDPPAYCRPGPE----------------------------------- 60
A +RI +EL+DL DPP C
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAVDNASKLLVLIELEDCCRRFSNCSCILLLEKSQDIAMA 61
Query: 61 -----PVT-DLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEYPFQPPKLTFKTKV--KSLA 112
PV D+ HW+ I GP +PY+GG F V + +P +YPF+PPK+ F+TKV ++
Sbjct: 62 HVLLCPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVN 121
Query: 113 QSLSRSLACVHRQISQLMLQSRTYECNSIAAGVPSEHXXXXXXXXXXXXXXXXFVSILYD 172
+ S L + Q S + S+ S+L D
Sbjct: 122 SNGSICLDILKEQWSPALTISKVL---------------------------LSICSLLTD 154
Query: 173 PLLDYPINDDIAEQYENEYELYEKEAREWTRRYS 206
P D P+ +IA Y+ + YE AR WT++Y+
Sbjct: 155 PNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYA 188
>AT1G36340.1 | chr1:13683791-13684924 REVERSE LENGTH=155
Length = 154
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 63 TDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEYPFQPPKLTFKTKV 108
++ W +I GP GTPY GG F + + +P +YPF+PPK TFKT +
Sbjct: 34 NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPI 79
>AT5G50870.2 | chr5:20699626-20700998 REVERSE LENGTH=204
Length = 203
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 39 RISRELEDLWLDP-PAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEYPF 97
RI +EL+D + + R P+ +L I GP GTPY GGTF +D+ P+ YPF
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKS-DNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPF 64
Query: 98 QPPKLTFKTKV 108
+PPK+ F TKV
Sbjct: 65 EPPKMQFSTKV 75
>AT5G50430.1 | chr5:20534366-20536307 REVERSE LENGTH=244
Length = 243
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 34 KAAQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPN 93
KA +R+ +E L +P ++ P P D+L W +++G GTP+AGG + + +P
Sbjct: 4 KACIKRLQKEYRALCKEPVSHVVARPSP-NDILEWHYVLEGSEGTPFAGGFYYGKIKFPP 62
Query: 94 EYPFQPPKLTFKT 106
EYP++PP +T T
Sbjct: 63 EYPYKPPGITMTT 75
>AT1G17280.1 | chr1:5917146-5919162 REVERSE LENGTH=238
Length = 237
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 34 KAAQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPN 93
KA +R+ +E L +P ++ P P D+L W +++G GTP+AGG + + +P
Sbjct: 4 KACIKRLQKEYRALCKEPVSHVVARPSP-NDILEWHYVLEGSEGTPFAGGFYYGKIKFPP 62
Query: 94 EYPFQPPKLTFKT 106
EYP++PP +T T
Sbjct: 63 EYPYKPPGITMTT 75
>AT1G14400.1 | chr1:4927294-4928136 REVERSE LENGTH=153
Length = 152
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 36 AQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEY 95
A++R+ R+ + L DPPA P+ +++ W +I GP TP+ GGTF + + + +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 96 PFQPPKLTFKTKV 108
P +PP + F +++
Sbjct: 64 PNKPPTVRFVSRM 76
>AT2G02760.1 | chr2:774271-775149 FORWARD LENGTH=153
Length = 152
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 36 AQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEY 95
A++R+ R+ + L DPPA P+ +++ W +I GP TP+ GGTF + + + +Y
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPQD-NNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDY 63
Query: 96 PFQPPKLTFKTKV 108
P +PP + F +++
Sbjct: 64 PNKPPTVRFVSRM 76
>AT1G16890.3 | chr1:5776550-5778327 REVERSE LENGTH=163
Length = 162
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 37/180 (20%)
Query: 38 RRISRELEDLWLDPPAYCRP-GPEPVT-------DLLHWEVIIDGPPGTPYAGGTFPVDV 89
RRI +E + L +P + P P ++ ++ V+I GP +PY GG F +++
Sbjct: 8 RRIIKETQRLLSEPGNFITSFDPSPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLEL 67
Query: 90 WYPNEYPFQPPKLTFKTKV-KSLAQSLSRSLACVHRQISQLMLQSRTYECNSIAAGVPSE 148
+ P EYP PK+ F TK+ L R + + LQ RT SI A
Sbjct: 68 FLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLL-SIQA----- 121
Query: 149 HXXXXXXXXXXXXXXXXFVSILYDPLLDYPINDDIAEQYE-NEYELYEKEAREWTRRYSS 207
+L P D P++++IA+ ++ NE E E A+EWTR Y+S
Sbjct: 122 --------------------LLSAPNPDDPLSENIAKHWKSNEAEAVET-AKEWTRLYAS 160
>AT2G32790.1 | chr2:13905649-13906271 REVERSE LENGTH=178
Length = 177
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 43/182 (23%)
Query: 34 KAAQRRISRELEDLWLDPPAYCR---PGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVW 90
K+A+ R+ +E ++ + R P PE ++ WE ++GP G PY G F V V
Sbjct: 28 KSAENRLWKEFQEKDDVLKIHVRSWLPSPE---NIFRWEATVNGPVGCPYEKGVFTVSVH 84
Query: 91 YPNEYPFQPPKLTFKTKVKSLAQSLSRSLACVHRQISQL------MLQSRTYECNSIAAG 144
P +YP++PPK+TFKTK+ H IS++ +L SR +I
Sbjct: 85 IPPKYPYEPPKITFKTKI-------------FHPNISEIGEIFVDILGSRWSSALTINLV 131
Query: 145 VPSEHXXXXXXXXXXXXXXXXFVSILYDPLLDYPINDDIAEQYENEYELYEKEAREWTRR 204
+ S SIL +P+ +++ A Y+ + + YEK AREWT +
Sbjct: 132 LLS------------------ICSILSNPVEPLLVSNHAARLYQKDRKAYEKVAREWTLK 173
Query: 205 YS 206
Y+
Sbjct: 174 YA 175
>AT5G62540.1 | chr5:25104679-25105465 FORWARD LENGTH=151
Length = 150
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 36 AQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEY 95
A++R+ + + L DPP P+ +++HW +I GP TP+ GGTF + + + +Y
Sbjct: 5 AKKRLMWDFKRLQKDPPVGISGAPQD-NNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDY 63
Query: 96 PFQPPKLTFKTKV 108
P +PP + F +++
Sbjct: 64 PNKPPIVRFVSRM 76
>AT1G45050.1 | chr1:17031337-17032967 FORWARD LENGTH=162
Length = 161
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 34 KAAQRRISRELEDLWLDPPAYCRPGPEPVTDLLH-WEVIIDGPPGTPYAGGTFPVDVWYP 92
K A R+ +EL + L+PP R VTD L W + + G PGT YA T+ + V +P
Sbjct: 14 KIACNRLQKELSEWQLNPPTGFR---HKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFP 70
Query: 93 NEYPFQPPKLTFKTKVKSLAQSLSRSLACV 122
YP + P++ F + S S C+
Sbjct: 71 EHYPMEAPQVVFVSPAPSHPHIYSNGHICL 100
>AT5G25760.1 | chr5:8967983-8969173 FORWARD LENGTH=158
Length = 157
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 63 TDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEYPFQPPKLTFKTKV 108
T++ W +I GP TPY GG F + P YP QPP++ F TK+
Sbjct: 32 TNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKI 77
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,108,165
Number of extensions: 216199
Number of successful extensions: 582
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 577
Number of HSP's successfully gapped: 22
Length of query: 249
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 153
Effective length of database: 8,474,633
Effective search space: 1296618849
Effective search space used: 1296618849
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)