BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0706400 Os02g0706400|AK121386
(101 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75250.1 | chr1:28245073-28245453 REVERSE LENGTH=127 85 8e-18
AT4G39250.1 | chr4:18271457-18271857 REVERSE LENGTH=101 83 3e-17
AT2G21650.1 | chr2:9259654-9260419 FORWARD LENGTH=102 80 2e-16
AT1G19510.1 | chr1:6756483-6757290 REVERSE LENGTH=101 77 2e-15
AT4G36570.1 | chr4:17254660-17254836 FORWARD LENGTH=59 74 2e-14
AT2G18328.1 | chr2:7964478-7964711 FORWARD LENGTH=78 70 1e-13
AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289 66 3e-12
AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278 65 6e-12
AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299 62 4e-11
AT3G11280.1 | chr3:3533477-3534393 REVERSE LENGTH=264 62 7e-11
AT5G04760.1 | chr5:1373752-1374529 REVERSE LENGTH=216 55 9e-09
AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299 52 7e-08
AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338 49 6e-07
AT3G10595.1 | chr3:3311905-3312815 REVERSE LENGTH=184 47 2e-06
>AT1G75250.1 | chr1:28245073-28245453 REVERSE LENGTH=127
Length = 126
Score = 84.7 bits (208), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Query: 3 SSWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDS 60
S WT QNK+FERALA+YD+DTPDRW NVA+AV GGK+V++VKRHY+ L++D+ I++
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAV-GGKTVEEVKRHYDILVEDLINIET 66
>AT4G39250.1 | chr4:18271457-18271857 REVERSE LENGTH=101
Length = 100
Score = 83.2 bits (204), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 50/60 (83%), Gaps = 3/60 (5%)
Query: 5 WTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDSTGGH 64
WT KQNK FE+ALA YD+DTP+RWQNVA+ V GGK+ ++VKRHYE L++D++ I++ GH
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVV-GGKTTEEVKRHYELLVQDINSIEN--GH 70
>AT2G21650.1 | chr2:9259654-9260419 FORWARD LENGTH=102
Length = 101
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 49/60 (81%), Gaps = 3/60 (5%)
Query: 5 WTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDSTGGH 64
WT KQNK FERALA+YD+DTPDRW NVARAV GGK+ ++ KR Y+ L++D++ I++ GH
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAV-GGKTPEEAKRQYDLLVRDIESIEN--GH 70
>AT1G19510.1 | chr1:6756483-6757290 REVERSE LENGTH=101
Length = 100
Score = 76.6 bits (187), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 46/52 (88%), Gaps = 1/52 (1%)
Query: 8 KQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRID 59
KQNK+FERALA+YD+DTPDRWQNVA+AV G KS ++VKRHY+ L++D+ I+
Sbjct: 15 KQNKMFERALAVYDKDTPDRWQNVAKAV-GSKSAEEVKRHYDILVEDLMNIE 65
>AT4G36570.1 | chr4:17254660-17254836 FORWARD LENGTH=59
Length = 58
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Query: 5 WTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYE 49
WT K+NK+FERALA YD+DTPDRW NVARAV GGKS ++V+RHYE
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAV-GGKSAEEVRRHYE 55
>AT2G18328.1 | chr2:7964478-7964711 FORWARD LENGTH=78
Length = 77
Score = 70.5 bits (171), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
Query: 8 KQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDS 60
+++K FE ALA +D+DTPDRWQ +ARAV GGKS ++VKRHYE L++DV+ I+S
Sbjct: 14 REDKQFEMALAKFDKDTPDRWQKIARAV-GGKSTEEVKRHYELLLRDVNDIES 65
>AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289
Length = 288
Score = 66.2 bits (160), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 3 SSWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDS 60
++WT +NK FE ALA+YD +TPDRWQ VA AV GK+V DV R Y L DV I++
Sbjct: 32 ATWTAAENKAFENALAVYDDNTPDRWQKVA-AVIPGKTVSDVIRQYNDLEADVSSIEA 88
>AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278
Length = 277
Score = 65.5 bits (158), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 2 SSSWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDS 60
SSSWT ++NK FERALA+Y DTPDRW VA A+ GK++ DV R Y KL +D+ I++
Sbjct: 28 SSSWTKEENKKFERALAVYADDTPDRWFKVA-AMIPGKTISDVMRQYSKLEEDLFDIEA 85
>AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299
Length = 298
Score = 62.4 bits (150), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 3 SSWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDS 60
+ WT ++NK FE ALA YD+DTPDRW VA A+ GK+V DV + Y +L +DV I++
Sbjct: 27 TKWTAEENKKFENALAFYDKDTPDRWSRVA-AMLPGKTVGDVIKQYRELEEDVSDIEA 83
>AT3G11280.1 | chr3:3533477-3534393 REVERSE LENGTH=264
Length = 263
Score = 61.6 bits (148), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 5 WTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDS 60
WT ++NK+FERALAIY D+PDRW VA + GK+V DV + Y KL +DV I++
Sbjct: 33 WTKEENKMFERALAIYAEDSPDRWFKVASMI-PGKTVFDVMKQYSKLEEDVFDIEA 87
>AT5G04760.1 | chr5:1373752-1374529 REVERSE LENGTH=216
Length = 215
Score = 54.7 bits (130), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 2 SSSWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDS 60
SS WT ++K+FE+AL ++ +P+RW+ +A + KS +V+ HYE L+ DV IDS
Sbjct: 3 SSQWTRSEDKMFEQALVLFPEGSPNRWERIADQL--HKSAGEVREHYEVLVHDVFEIDS 59
>AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299
Length = 298
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 3 SSWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDS 60
S W+ + + FERALA ++ +RW+ +A V G KSV+ +K HYE L++DV RI+S
Sbjct: 10 SVWSREDDIAFERALANNTDESEERWEKIAADVPG-KSVEQIKEHYELLVEDVTRIES 66
>AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338
Length = 337
Score = 48.5 bits (114), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MSSSWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDS 60
+ SSW+ + FE+ALAIY+ T RW+ +A V GK+++ V HY L +DV I+S
Sbjct: 9 VGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVV-PGKTLEQVIEHYNILARDVMLIES 67
>AT3G10595.1 | chr3:3311905-3312815 REVERSE LENGTH=184
Length = 183
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 3 SSWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGGKSVDDVKRHYEKLIKDVDRIDST 61
+SWTT++N++F+ AL ++ R+++VA V +SVDDVK HY++L+ D+ + S+
Sbjct: 4 NSWTTEENEMFKDALVMFTAFLLTRFESVAEYV--DRSVDDVKEHYKELVNDLLEMGSS 60
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,916,138
Number of extensions: 62205
Number of successful extensions: 216
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 204
Number of HSP's successfully gapped: 15
Length of query: 101
Length of database: 11,106,569
Length adjustment: 71
Effective length of query: 30
Effective length of database: 9,160,033
Effective search space: 274800990
Effective search space used: 274800990
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 104 (44.7 bits)