BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0704600 Os02g0704600|J065163N21
         (456 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50910.1  | chr3:18920189-18921999 FORWARD LENGTH=448          197   9e-51
AT5G66480.1  | chr5:26544737-26546476 REVERSE LENGTH=445          165   5e-41

>AT3G50910.1 | chr3:18920189-18921999 FORWARD LENGTH=448
          Length = 447

 Score =  197 bits (501), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 143/405 (35%), Positives = 216/405 (53%), Gaps = 38/405 (9%)

Query: 58  SATLYATPESTSLPDSPSSFPGTWSPYLINHKRRGP-CLVKTLSQGDVGSDGSQQPTLS- 115
           S  LYATP++  +P   S      SPY+INHK RGP  L+K+ S+ +V S  S Q TL  
Sbjct: 59  SPALYATPDA--IPLPNSPSSFPPSPYIINHKSRGPPRLLKSSSEANVVS-SSHQKTLEE 115

Query: 116 --------VTLPPLPKRXXXXXXXXXXXXXXXXXNGVLEGDSGVVETLDWQNGMLQKGKG 167
                   V + P  +R                 NGV    +  V   ++ +G++    G
Sbjct: 116 ETITAETDVKVSPR-RRSTSFSFPITEVTEDDYSNGV---HARTVGNYNF-DGIVDGPVG 170

Query: 168 T---VSGEYGHDQAEFEFQHGNPDATVRPVN-VGRPANGGTPRKINNDAFFELQDSLSMA 223
               + G+ G+ ++E +    N    +  VN +  P    T ++  ++ F++  +S S  
Sbjct: 171 NWSPLDGKSGNGKSELD----NAANGLERVNGLSEPVPIKTDKESESEDFYDPGESASFT 226

Query: 224 SNSEAEDAGGHERWWKPSSPLGTSVGTPGAEFYDAFEEISSDGATRSS-QCMDDDLREMR 282
           SN++ E   G E   + ++P+G        EFYDA++E+S+D   +SS   ++ +L E+R
Sbjct: 227 SNTDVEGDAGDESSQRLATPVG--------EFYDAWDELSTDSGMQSSVNNIESELSEIR 278

Query: 283 LSLLMEIERRKQAEEALENWQKEWKKLSDHLSLIALTLPPPSLAEDTDDSSMDPGAELCQ 342
           LSLLMEIE+RKQ EEALE  Q  W++L + ++ + L +P    A   +   M+   EL  
Sbjct: 279 LSLLMEIEKRKQTEEALEQMQIHWQRLREQMAQVGLFVPIDPTASTNN---MNLSEELRC 335

Query: 343 QITVSQLVXXXXXXXXXXXEVETDMETKIAAKNFEIARLSDRVQYYEAANREMSQRNQEA 402
           Q+ +++ V           EVE +ME+ +  KNFEI RLSDR+ YYEA NREMSQRNQEA
Sbjct: 336 QLEIARFVSDSLGRGMAKAEVEMEMESMLETKNFEITRLSDRLHYYEAVNREMSQRNQEA 395

Query: 403 IEMSXXXXXXXXXXXXWFWGSVGLAVTLGTAAIAWSYLPAAQPQA 447
           IE++            W WGS+   +TLG+AA+AWSY+PAA+P +
Sbjct: 396 IEVARRERQKRKKRQRWIWGSIAATITLGSAALAWSYIPAAKPSS 440



>AT5G66480.1 | chr5:26544737-26546476 REVERSE LENGTH=445
          Length = 444

 Score =  165 bits (417), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/258 (41%), Positives = 143/258 (55%), Gaps = 19/258 (7%)

Query: 199 PANGGTPRKINNDAFFELQDSLSMASNSEAEDAGGHERWWKPSSPLGTSVGTPGAEFYDA 258
           P      +++  + F+   + +S  SN+E ED    E     S  L T VG    EFYDA
Sbjct: 194 PVRIKADKELEPENFYNPGELVSFTSNTEVEDFERAE----SSHSLATHVG----EFYDA 245

Query: 259 FEEISSD-GATRSSQCMDDDLREMRLSLLMEIERRKQAEEALENWQKEWKKLSDHLSLIA 317
            +E+S+D G   S+  ++ ++REMRL LLMEIERR+QAE  LE  Q  W++L D L+ + 
Sbjct: 246 CDELSTDSGMQSSANNIESEVREMRLGLLMEIERRRQAEATLEQMQVHWRRLRDQLADVG 305

Query: 318 LTLPPPSLAEDTDDSSMDPGAELCQQITVSQLVXXXXXXXXXXXEVETDMETKIAAKNFE 377
           + LP   L       SM+   EL  Q+ V++ V           EVE +ME ++ AKNFE
Sbjct: 306 MFLP---LDPTRSQYSMNLADELRCQLEVTRFVSDTLGSDLAKTEVEMEMEAELEAKNFE 362

Query: 378 IARLSDRVQYYEAANREMSQRNQEAIEMSXXXXXXXXXXXXWFWGSVGLAVTLGTAAIAW 437
           I RLSDR+ YYE  N+EMSQRNQEAIE++            W WGS+   +TLG+  +AW
Sbjct: 363 ITRLSDRLHYYETVNQEMSQRNQEAIEVARRDGQKRKRRQRWIWGSIAATITLGSGVLAW 422

Query: 438 SYLP-------AAQPQAS 448
           SYLP        AQPQ S
Sbjct: 423 SYLPPGMLSSDEAQPQLS 440



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.310    0.127    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,619,482
Number of extensions: 323304
Number of successful extensions: 750
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 744
Number of HSP's successfully gapped: 3
Length of query: 456
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 354
Effective length of database: 8,310,137
Effective search space: 2941788498
Effective search space used: 2941788498
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 113 (48.1 bits)