BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0685200 Os02g0685200|AK111726
(491 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G17300.1 | chr5:5690435-5692435 REVERSE LENGTH=388 134 1e-31
AT1G01060.1 | chr1:33992-37061 REVERSE LENGTH=646 125 7e-29
AT2G46830.1 | chr2:19246005-19248717 FORWARD LENGTH=609 118 6e-27
AT1G18330.2 | chr1:6306196-6307718 REVERSE LENGTH=373 117 1e-26
AT3G10113.1 | chr3:3118043-3119391 REVERSE LENGTH=337 117 1e-26
AT5G37260.1 | chr5:14751344-14752972 REVERSE LENGTH=288 117 1e-26
AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299 96 5e-20
AT5G52660.2 | chr5:21359423-21362037 REVERSE LENGTH=332 92 8e-19
AT4G01280.2 | chr4:535288-536854 FORWARD LENGTH=304 91 1e-18
AT1G01520.1 | chr1:190596-192139 FORWARD LENGTH=288 90 3e-18
AT5G02840.1 | chr5:648794-651212 FORWARD LENGTH=294 90 3e-18
AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299 54 1e-07
AT5G47390.1 | chr5:19227001-19228546 FORWARD LENGTH=366 51 1e-06
AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289 50 2e-06
AT1G74840.1 | chr1:28116201-28117317 REVERSE LENGTH=266 50 2e-06
AT3G16350.1 | chr3:5547828-5549397 FORWARD LENGTH=388 50 2e-06
AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299 50 4e-06
>AT5G17300.1 | chr5:5690435-5692435 REVERSE LENGTH=388
Length = 387
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 78/112 (69%), Gaps = 6/112 (5%)
Query: 1 MEMACLPGNAMATDENGADDRAGGESTVDHLRSHMNYGDMDLSGEEHVPKARKPYTITKQ 60
M + L N T+ A R E T D + + D G ++ PK RKPYTITK+
Sbjct: 1 MASSPLTANVQGTN---ASLRNRDEETADK---QIQFNDQSFGGNDYAPKVRKPYTITKE 54
Query: 61 REKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQIRSHAQKFFSKVVRE 112
RE+WTDEEH+ F+EAL+L+GRAWRRI+EH+G+KTAVQIRSHAQKFFSKV RE
Sbjct: 55 RERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQKFFSKVARE 106
>AT1G01060.1 | chr1:33992-37061 REVERSE LENGTH=646
Length = 645
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 67/74 (90%)
Query: 39 DMDLSGEEHVPKARKPYTITKQREKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQI 98
D + SGEE + KARKPYTITKQRE+WT++EH FLEAL+L+GRAW+RI+EHIGTKTAVQI
Sbjct: 2 DTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQI 61
Query: 99 RSHAQKFFSKVVRE 112
RSHAQKFF+K+ +E
Sbjct: 62 RSHAQKFFTKLEKE 75
>AT2G46830.1 | chr2:19246005-19248717 FORWARD LENGTH=609
Length = 608
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 65/74 (87%)
Query: 39 DMDLSGEEHVPKARKPYTITKQREKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQI 98
+ + SGE+ V K RKPYTITKQRE+WT+EEH F+EAL+L+GRAW++I+EH+ TKTAVQI
Sbjct: 2 ETNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQI 61
Query: 99 RSHAQKFFSKVVRE 112
RSHAQKFFSKV +E
Sbjct: 62 RSHAQKFFSKVEKE 75
>AT1G18330.2 | chr1:6306196-6307718 REVERSE LENGTH=373
Length = 372
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 61/67 (91%)
Query: 46 EHVPKARKPYTITKQREKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQIRSHAQKF 105
E+V K RKPYT+TKQREKW++EEH FLEA++L+GR WR+IQEHIGTKTAVQIRSHAQKF
Sbjct: 61 ENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKF 120
Query: 106 FSKVVRE 112
FSK+ +E
Sbjct: 121 FSKMAQE 127
>AT3G10113.1 | chr3:3118043-3119391 REVERSE LENGTH=337
Length = 336
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 61/67 (91%)
Query: 46 EHVPKARKPYTITKQREKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQIRSHAQKF 105
E+V K RKPYT+TKQREKW++EEH FLEA++L+GR WR+IQEHIGTKTAVQIRSHAQKF
Sbjct: 50 ENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKF 109
Query: 106 FSKVVRE 112
FSK+ +E
Sbjct: 110 FSKMAQE 116
>AT5G37260.1 | chr5:14751344-14752972 REVERSE LENGTH=288
Length = 287
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 58/63 (92%)
Query: 50 KARKPYTITKQREKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQIRSHAQKFFSKV 109
K RKPYTITKQREKWT+ EH F+EAL+L+GRAWRRI+EH+GTKTAVQIRSHAQKFF+KV
Sbjct: 25 KTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFTKV 84
Query: 110 VRE 112
R+
Sbjct: 85 ARD 87
>AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299
Length = 298
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 49/60 (81%)
Query: 50 KARKPYTITKQREKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQIRSHAQKFFSKV 109
K RKPYTITK RE WT+EEH FLEALQL R W++I++ +G+KT +QIRSHAQK+F KV
Sbjct: 32 KVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKV 91
>AT5G52660.2 | chr5:21359423-21362037 REVERSE LENGTH=332
Length = 331
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 50/67 (74%)
Query: 43 SGEEHVPKARKPYTITKQREKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQIRSHA 102
S E+ K RKPYTITK RE WT+ EH FLEALQL R W++I+ IG+KT +QIRSHA
Sbjct: 54 SEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHA 113
Query: 103 QKFFSKV 109
QK+F KV
Sbjct: 114 QKYFLKV 120
>AT4G01280.2 | chr4:535288-536854 FORWARD LENGTH=304
Length = 303
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 44 GEEHVPKARKPYTITKQREKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQIRSHAQ 103
E+ K RKPYTI K RE WTD+EH FLEAL L R W++I+ +G+KT VQIRSHAQ
Sbjct: 42 SEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQ 101
Query: 104 KFFSKV 109
K+F KV
Sbjct: 102 KYFLKV 107
>AT1G01520.1 | chr1:190596-192139 FORWARD LENGTH=288
Length = 287
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 45 EEHVPKARKPYTITKQREKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQIRSHAQK 104
E+ K RKPYTITK RE WT++EH FLEAL L R W++I+ +G+KT +QIRSHAQK
Sbjct: 45 EDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIRSHAQK 104
Query: 105 FFSKV 109
+F KV
Sbjct: 105 YFLKV 109
>AT5G02840.1 | chr5:648794-651212 FORWARD LENGTH=294
Length = 293
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%)
Query: 44 GEEHVPKARKPYTITKQREKWTDEEHRLFLEALQLHGRAWRRIQEHIGTKTAVQIRSHAQ 103
GE K RK YTITK RE WT+ EH FLEALQL R W++I++ +G+KT +QIRSHAQ
Sbjct: 31 GEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQ 90
Query: 104 KFFSKV 109
K+F KV
Sbjct: 91 KYFLKV 96
>AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 1 MEMACLPGNAMATDENGADDRAGGESTVDHLRSHMNYGDMDLSGEEHVPKARKPYTITKQ 60
+E C+P A + E G++ AG E + + G+ + +G+ + R+ +
Sbjct: 64 IESGCVPLPAYGSPE-GSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERR------K 116
Query: 61 REKWTDEEHRLFLEALQLHGRA-WRRIQEH-IGTKTAVQIRSHAQKFFSKV 109
WT++EHRLFL L +G+ WR I + + T+T Q+ SHAQK+F ++
Sbjct: 117 GIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 167
>AT5G47390.1 | chr5:19227001-19228546 FORWARD LENGTH=366
Length = 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
Query: 58 TKQREK---WTDEEHRLFLEALQLHGRA-WRRI-QEHIGTKTAVQIRSHAQKFF 106
+++R+K WT+EEHR+FL LQ G+ WR I + ++ T+T Q+ SHAQK+F
Sbjct: 89 SRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYF 142
>AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289
Length = 288
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 51 ARKPYTITKQREKWTDEEHRLFLEALQLHGRA-WRRI-QEHIGTKTAVQIRSHAQKFF 106
R P K+ WT+EEH+LFL L+ +G+ WR I + + T+T Q+ SHAQK+F
Sbjct: 130 GRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYF 187
>AT1G74840.1 | chr1:28116201-28117317 REVERSE LENGTH=266
Length = 265
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 43 SGEEHVPKARKPYTITKQR-EKWTDEEHRLFLEALQLHGRA-WRRI-QEHIGTKTAVQIR 99
S +E +P + I ++R WT+EEH+LFL LQ G+ W+ I + + T+T+ Q+
Sbjct: 76 SADEALPMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVA 135
Query: 100 SHAQKFF 106
SHAQK+F
Sbjct: 136 SHAQKYF 142
>AT3G16350.1 | chr3:5547828-5549397 FORWARD LENGTH=388
Length = 387
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 64 WTDEEHRLFLEALQLHGRA-WRRI-QEHIGTKTAVQIRSHAQKFF 106
WT+EEHRLFL LQ G+ WR I + ++ ++T Q+ SHAQK+F
Sbjct: 139 WTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYF 183
>AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 64 WTDEEHRLFLEALQLHGRA-WRRI-QEHIGTKTAVQIRSHAQKFFSKVV 110
WT+EEHR FL L+ +G+ WR I + + T+T Q+ SHAQK+F + V
Sbjct: 143 WTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQV 191
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,236,130
Number of extensions: 290840
Number of successful extensions: 699
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 715
Number of HSP's successfully gapped: 17
Length of query: 491
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 388
Effective length of database: 8,282,721
Effective search space: 3213695748
Effective search space used: 3213695748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 114 (48.5 bits)